RNA–Protein interactions for RNA: ENST00000550692.1

BRF1-218, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-218ENST00000550692 EHMT1Q9H9B1 1298 aa12.86□□□□□ -0.35
BRF1-218ENST00000550692 C6orf50Q9HD87 102 aa12.86□□□□□ -0.35
BRF1-218ENST00000550692 JADE2Q9NQC1 790 aa12.86□□□□□ -0.35
BRF1-218ENST00000550692 PKD2L1Q9P0L9 805 aa12.86□□□□□ -0.35
BRF1-218ENST00000550692 VPS54Q9P1Q0 977 aa12.86□□□□□ -0.35
BRF1-218ENST00000550692 LIMCH1Q9UPQ0 1083 aa12.86□□□□□ -0.35
BRF1-218ENST00000550692 HAS3O00219 553 aa12.85□□□□□ -0.35
BRF1-218ENST00000550692 NOP56O00567 594 aaKnown RBP12.85□□□□□ -0.35
BRF1-218ENST00000550692 DTNBO60941 627 aa12.85□□□□□ -0.35
BRF1-218ENST00000550692 SUPT20HL2P0C7V6 817 aa12.85□□□□□ -0.35
BRF1-218ENST00000550692 KCNA2P16389 499 aa12.85□□□□□ -0.35
BRF1-218ENST00000550692 CCL23P55773 120 aa12.85□□□□□ -0.35
BRF1-218ENST00000550692 SP4Q02446 784 aa12.85□□□□□ -0.35
BRF1-218ENST00000550692 PTPN11Q06124 597 aaPredicted RBP12.85□□□□□ -0.35
BRF1-218ENST00000550692 SSRP1Q08945 709 aaKnown RBP12.85□□□□□ -0.35
BRF1-218ENST00000550692 AP3B2Q13367 1082 aa12.85□□□□□ -0.35
BRF1-218ENST00000550692 MTMR1Q13613 665 aa12.85□□□□□ -0.35
BRF1-218ENST00000550692 MFSD10Q14728 455 aa12.85□□□□□ -0.35
BRF1-218ENST00000550692 KIAA0753Q2KHM9 967 aa12.85□□□□□ -0.35
BRF1-218ENST00000550692 C16orf59Q7L2K0 433 aa12.85□□□□□ -0.35
BRF1-218ENST00000550692 TRIM22Q8IYM9 498 aa12.85□□□□□ -0.35
BRF1-218ENST00000550692 CCDC12Q8WUD4 166 aaPredicted RBP12.85□□□□□ -0.35
BRF1-218ENST00000550692 GPR20Q99678 358 aa12.85□□□□□ -0.35
BRF1-218ENST00000550692 MXRA8Q9BRK3 442 aa12.85□□□□□ -0.35
BRF1-218ENST00000550692 SLKQ9H2G2 1235 aaPredicted RBP12.85□□□□□ -0.35
BRF1-218ENST00000550692 HDAC6Q9UBN7 1215 aa12.85□□□□□ -0.35
BRF1-218ENST00000550692 A0A0C4DFX4 3053 aa12.85□□□□□ -0.35
BRF1-218ENST00000550692 MAFGO15525 162 aa12.84□□□□□ -0.35
BRF1-218ENST00000550692 PFKFB2O60825 505 aa12.84□□□□□ -0.35
BRF1-218ENST00000550692 LGALS2P05162 132 aa12.84□□□□□ -0.35
BRF1-218ENST00000550692 ARP10275 920 aa12.84□□□□□ -0.35
BRF1-218ENST00000550692 ACRP10323 421 aa12.84□□□□□ -0.35
BRF1-218ENST00000550692 GNA11P29992 359 aa12.84□□□□□ -0.35
BRF1-218ENST00000550692 SREBF1P36956 1147 aa12.84□□□□□ -0.35
BRF1-218ENST00000550692 ARHGAP4P98171 946 aa12.84□□□□□ -0.35
BRF1-218ENST00000550692 PPIGQ13427 754 aaKnown RBP eCLIP12.84□□□□□ -0.356e-8■■□□□ 14.2
BRF1-218ENST00000550692 GDF6Q6KF10 455 aaPredicted RBP12.84□□□□□ -0.35
BRF1-218ENST00000550692 CPLX2Q6PUV4 134 aaKnown RBP12.84□□□□□ -0.35
BRF1-218ENST00000550692 SESTD1Q86VW0 696 aa12.84□□□□□ -0.35
BRF1-218ENST00000550692 REXO1Q8N1G1 1221 aaKnown RBP12.84□□□□□ -0.35
BRF1-218ENST00000550692 TMEM199Q8N511 208 aa12.84□□□□□ -0.35
BRF1-218ENST00000550692 RASGRP4Q8TDF6 673 aa12.84□□□□□ -0.35
BRF1-218ENST00000550692 SNX21Q969T3 373 aa12.84□□□□□ -0.35
BRF1-218ENST00000550692 CDHR1Q96JP9 859 aa12.84□□□□□ -0.35
BRF1-218ENST00000550692 ZSCAN31Q96LW9 406 aaPredicted RBP12.84□□□□□ -0.35
BRF1-218ENST00000550692 AIFM3Q96NN9 605 aa12.84□□□□□ -0.35
BRF1-218ENST00000550692 CTAGE1Q96RT6 745 aa12.84□□□□□ -0.35
BRF1-218ENST00000550692 KATNAL1Q9BW62 490 aa12.84□□□□□ -0.35
BRF1-218ENST00000550692 WNT8AQ9H1J5 351 aa12.84□□□□□ -0.35
BRF1-218ENST00000550692 H3BRB1 525 aa12.83□□□□□ -0.36
BRF1-218ENST00000550692 DEXIO95424 95 aa12.83□□□□□ -0.36
BRF1-218ENST00000550692 HIC1Q14526 733 aa12.83□□□□□ -0.36
BRF1-218ENST00000550692 PTGISQ16647 500 aa12.83□□□□□ -0.36
BRF1-218ENST00000550692 ME3Q16798 604 aa12.83□□□□□ -0.36
BRF1-218ENST00000550692 CEP55Q53EZ4 464 aa12.83□□□□□ -0.36
BRF1-218ENST00000550692 UTP14CQ5TAP6 766 aaKnown RBP12.83□□□□□ -0.36
BRF1-218ENST00000550692 TRIM50Q86XT4 487 aa12.83□□□□□ -0.36
BRF1-218ENST00000550692 C7orf31Q8N865 590 aa12.83□□□□□ -0.36
BRF1-218ENST00000550692 GIMAP8Q8ND71 665 aaPredicted RBP12.83□□□□□ -0.36
BRF1-218ENST00000550692 CCDC148Q8NFR7 591 aa12.83□□□□□ -0.36
BRF1-218ENST00000550692 CRYGNQ8WXF5 182 aa12.83□□□□□ -0.36
BRF1-218ENST00000550692 SCLYQ96I15 445 aa12.83□□□□□ -0.36
BRF1-218ENST00000550692 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.83□□□□□ -0.362e-6■■■□□ 18.2
BRF1-218ENST00000550692 TUT1Q9H6E5 874 aaKnown RBP12.83□□□□□ -0.36
BRF1-218ENST00000550692 SH3GLB2Q9NR46 395 aa12.83□□□□□ -0.36
BRF1-218ENST00000550692 KCNH7Q9NS40 1196 aa12.83□□□□□ -0.36
BRF1-218ENST00000550692 GTF2IRD1Q9UHL9 959 aa12.83□□□□□ -0.36
BRF1-218ENST00000550692 NOD1Q9Y239 953 aa12.83□□□□□ -0.36
BRF1-218ENST00000550692 LAMA2P24043 3122 aaKnown RBP12.82□□□□□ -0.36
BRF1-218ENST00000550692 TRIP12Q14669 1992 aaPredicted RBP12.82□□□□□ -0.36
BRF1-218ENST00000550692 GSTTP1A0A1W2PQM5 241 aa12.82□□□□□ -0.36
BRF1-218ENST00000550692 FAM86B1E9PN63 330 aa12.82□□□□□ -0.36
BRF1-218ENST00000550692 MEIS1O00470 390 aa12.82□□□□□ -0.36
BRF1-218ENST00000550692 LARGE1O95461 756 aa12.82□□□□□ -0.36
BRF1-218ENST00000550692 CTDNEP1O95476 244 aa12.82□□□□□ -0.36
BRF1-218ENST00000550692 CYP3A4P08684 503 aa12.82□□□□□ -0.36
BRF1-218ENST00000550692 FAM86B2P0C5J1 330 aa12.82□□□□□ -0.36
BRF1-218ENST00000550692 ZNF76P36508 570 aa12.82□□□□□ -0.36
BRF1-218ENST00000550692 NLRP5P59047 1200 aa12.82□□□□□ -0.36
BRF1-218ENST00000550692 ZNF200P98182 395 aaPredicted RBP12.82□□□□□ -0.36
BRF1-218ENST00000550692 TMEM240Q5SV17 173 aa12.82□□□□□ -0.36
BRF1-218ENST00000550692 NECAB1Q8N987 351 aa12.82□□□□□ -0.36
BRF1-218ENST00000550692 BICD2Q8TD16 824 aa12.82□□□□□ -0.36
BRF1-218ENST00000550692 RNPC3Q96LT9 517 aaKnown RBP12.82□□□□□ -0.36
BRF1-218ENST00000550692 IL23AQ9NPF7 189 aa12.82□□□□□ -0.36
BRF1-218ENST00000550692 TSHZ2Q9NRE2 1034 aa12.82□□□□□ -0.36
BRF1-218ENST00000550692 SH2B1Q9NRF2 756 aaPredicted RBP12.82□□□□□ -0.36
BRF1-218ENST00000550692 EDIL3O43854 480 aa12.81□□□□□ -0.36
BRF1-218ENST00000550692 TCF7P36402 384 aaPredicted RBP12.81□□□□□ -0.36
BRF1-218ENST00000550692 ITGB3BPQ13352 177 aaPredicted RBP12.81□□□□□ -0.36
BRF1-218ENST00000550692 MCTP2Q6DN12 878 aa12.81□□□□□ -0.36
BRF1-218ENST00000550692 ZNF365Q70YC5 407 aa12.81□□□□□ -0.36
BRF1-218ENST00000550692 PLA2G4DQ86XP0 818 aa12.81□□□□□ -0.36
BRF1-218ENST00000550692 SEPT1Q8WYJ6 367 aa12.81□□□□□ -0.36
BRF1-218ENST00000550692 DHX38Q92620 1227 aaKnown RBP12.81□□□□□ -0.36
BRF1-218ENST00000550692 VWCEQ96DN2 955 aa12.81□□□□□ -0.36
BRF1-218ENST00000550692 UIMC1Q96RL1 719 aa12.81□□□□□ -0.36
BRF1-218ENST00000550692 AGO4Q9HCK5 861 aaKnown RBP12.81□□□□□ -0.36
BRF1-218ENST00000550692 SCN5AQ14524 2016 aa12.8□□□□□ -0.36
BRF1-218ENST00000550692 IGLV3-22A0A075B6J6 115 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms