RNA–Protein interactions for RNA: ENST00000550543.1

TPCN1-213, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-213ENST00000550543 TNPO1Q92973 898 aaKnown RBP16.41■□□□□ 0.22
TPCN1-213ENST00000550543 SPZ1Q9BXG8 430 aa16.41■□□□□ 0.22
TPCN1-213ENST00000550543 FAM50BQ9Y247 325 aa16.41■□□□□ 0.22
TPCN1-213ENST00000550543 BDP1A6H8Y1 2624 aa16.4■□□□□ 0.22
TPCN1-213ENST00000550543 SPATA31C2B4DYI2 1134 aa16.4■□□□□ 0.22
TPCN1-213ENST00000550543 PIK3CDO00329 1044 aa16.4■□□□□ 0.22
TPCN1-213ENST00000550543 LPXNO60711 386 aa16.4■□□□□ 0.22
TPCN1-213ENST00000550543 CYP21A2P08686 494 aa16.4■□□□□ 0.22
TPCN1-213ENST00000550543 CALM1P0DP23 149 aa16.4■□□□□ 0.22
TPCN1-213ENST00000550543 CALM2P0DP24 149 aa16.4■□□□□ 0.22
TPCN1-213ENST00000550543 CALM3P0DP25 149 aa16.4■□□□□ 0.22
TPCN1-213ENST00000550543 KCNQ1P51787 676 aa16.4■□□□□ 0.22
TPCN1-213ENST00000550543 PCNX4Q63HM2 1172 aa16.4■□□□□ 0.22
TPCN1-213ENST00000550543 TAF2Q6P1X5 1199 aa16.4■□□□□ 0.22
TPCN1-213ENST00000550543 TRAF7Q6Q0C0 670 aa16.4■□□□□ 0.22
TPCN1-213ENST00000550543 FAM43BQ6ZT52 329 aaPredicted RBP16.4■□□□□ 0.22
TPCN1-213ENST00000550543 MYOCDQ8IZQ8 938 aa16.4■□□□□ 0.22
TPCN1-213ENST00000550543 DBF4BQ8NFT6 615 aa16.4■□□□□ 0.22
TPCN1-213ENST00000550543 YME1L1Q96TA2 773 aa16.4■□□□□ 0.22
TPCN1-213ENST00000550543 SUGCTQ9HAC7 445 aa16.4■□□□□ 0.22
TPCN1-213ENST00000550543 RWDD3Q9Y3V2 267 aa16.4■□□□□ 0.22
TPCN1-213ENST00000550543 MYH6P13533 1939 aa16.4■□□□□ 0.22
TPCN1-213ENST00000550543 NRCAMQ92823 1304 aa16.4■□□□□ 0.22
TPCN1-213ENST00000550543 LCHNA4D1U4 455 aa16.39■□□□□ 0.21
TPCN1-213ENST00000550543 E7EWF7 191 aa16.39■□□□□ 0.21
TPCN1-213ENST00000550543 NCK2O43639 380 aa16.39■□□□□ 0.21
TPCN1-213ENST00000550543 CHMLP26374 656 aa16.39■□□□□ 0.21
TPCN1-213ENST00000550543 HTRA4P83105 476 aaPredicted RBP16.39■□□□□ 0.21
TPCN1-213ENST00000550543 SP2Q02086 613 aa16.39■□□□□ 0.21
TPCN1-213ENST00000550543 IL31RAQ8NI17 732 aa16.39■□□□□ 0.21
TPCN1-213ENST00000550543 SP7Q8TDD2 431 aaPredicted RBP16.39■□□□□ 0.21
TPCN1-213ENST00000550543 GDPD5Q8WTR4 605 aa16.39■□□□□ 0.21
TPCN1-213ENST00000550543 EHMT1Q9H9B1 1298 aa16.39■□□□□ 0.21
TPCN1-213ENST00000550543 HCN4Q9Y3Q4 1203 aa16.39■□□□□ 0.21
TPCN1-213ENST00000550543 TET1Q8NFU7 2136 aa16.39■□□□□ 0.21
TPCN1-213ENST00000550543 CHD7Q9P2D1 2997 aa16.38■□□□□ 0.21
TPCN1-213ENST00000550543 MAFGO15525 162 aa16.38■□□□□ 0.21
TPCN1-213ENST00000550543 ARHGEF15O94989 841 aa16.38■□□□□ 0.21
TPCN1-213ENST00000550543 ZNF200P98182 395 aaPredicted RBP16.38■□□□□ 0.21
TPCN1-213ENST00000550543 MBTPS1Q14703 1052 aa16.38■□□□□ 0.21
TPCN1-213ENST00000550543 CYFIP1Q7L576 1253 aa16.38■□□□□ 0.21
TPCN1-213ENST00000550543 GPRASP2Q96D09 838 aa16.38■□□□□ 0.21
TPCN1-213ENST00000550543 MRPL38Q96DV4 380 aaKnown RBP16.38■□□□□ 0.21
TPCN1-213ENST00000550543 TMEM87BQ96K49 555 aa16.38■□□□□ 0.21
TPCN1-213ENST00000550543 GPR20Q99678 358 aa16.38■□□□□ 0.21
TPCN1-213ENST00000550543 RNPEPQ9H4A4 650 aa16.38■□□□□ 0.21
TPCN1-213ENST00000550543 UBE2ZQ9H832 354 aaPredicted RBP16.38■□□□□ 0.21
TPCN1-213ENST00000550543 MTUS1Q9ULD2 1270 aa16.38■□□□□ 0.21
TPCN1-213ENST00000550543 TRIP12Q14669 1992 aaPredicted RBP16.38■□□□□ 0.21
TPCN1-213ENST00000550543 SGSM2O43147 1006 aa16.37■□□□□ 0.21
TPCN1-213ENST00000550543 CYTH3O43739 400 aa16.37■□□□□ 0.21
TPCN1-213ENST00000550543 LEXMQ3ZCV2 418 aa16.37■□□□□ 0.21
TPCN1-213ENST00000550543 TMEM31Q5JXX7 168 aa16.37■□□□□ 0.21
TPCN1-213ENST00000550543 KRT40Q6A162 431 aa16.37■□□□□ 0.21
TPCN1-213ENST00000550543 FAM117BQ6P1L5 589 aa16.37■□□□□ 0.21
TPCN1-213ENST00000550543 RPAINQ86UA6 219 aa16.37■□□□□ 0.21
TPCN1-213ENST00000550543 ZNF654Q8IZM8 581 aa16.37■□□□□ 0.21
TPCN1-213ENST00000550543 TOP1MTQ969P6 601 aa16.37■□□□□ 0.21
TPCN1-213ENST00000550543 FAM122AQ96E09 287 aa16.37■□□□□ 0.21
TPCN1-213ENST00000550543 CCDC69A6NI79 296 aa16.36■□□□□ 0.21
TPCN1-213ENST00000550543 TREHO43280 583 aa16.36■□□□□ 0.21
TPCN1-213ENST00000550543 GSPT1P15170 499 aaKnown RBP16.36■□□□□ 0.21
TPCN1-213ENST00000550543 MCM5P33992 734 aa16.36■□□□□ 0.21
TPCN1-213ENST00000550543 MRPS9P82933 396 aaKnown RBP16.36■□□□□ 0.21
TPCN1-213ENST00000550543 MKRN4PQ13434 485 aaPredicted RBP16.36■□□□□ 0.21
TPCN1-213ENST00000550543 FAM26DQ5JW98 314 aa16.36■□□□□ 0.21
TPCN1-213ENST00000550543 NFXL1Q6ZNB6 911 aa16.36■□□□□ 0.21
TPCN1-213ENST00000550543 IGDCC4Q8TDY8 1250 aa16.36■□□□□ 0.21
TPCN1-213ENST00000550543 MAP4K1Q92918 833 aa16.36■□□□□ 0.21
TPCN1-213ENST00000550543 WNT8BQ93098 351 aa16.36■□□□□ 0.21
TPCN1-213ENST00000550543 NECAB3Q96P71 396 aaPredicted RBP16.36■□□□□ 0.21
TPCN1-213ENST00000550543 IFIH1Q9BYX4 1025 aaKnown RBP16.36■□□□□ 0.21
TPCN1-213ENST00000550543 ERAP1Q9NZ08 941 aa16.36■□□□□ 0.21
TPCN1-213ENST00000550543 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.35■□□□□ 0.21
TPCN1-213ENST00000550543 SPDYE3A6NKU9 549 aa16.35■□□□□ 0.21
TPCN1-213ENST00000550543 SORBS3O60504 671 aa16.35■□□□□ 0.21
TPCN1-213ENST00000550543 RB1P06400 928 aa16.35■□□□□ 0.21
TPCN1-213ENST00000550543 PLA2G5P39877 138 aa16.35■□□□□ 0.21
TPCN1-213ENST00000550543 ARHGAP4P98171 946 aa16.35■□□□□ 0.21
TPCN1-213ENST00000550543 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.35■□□□□ 0.21
TPCN1-213ENST00000550543 TMCO2Q7Z6W1 182 aaPredicted RBP16.35■□□□□ 0.21
TPCN1-213ENST00000550543 MB21D2Q8IYB1 491 aaPredicted RBP16.35■□□□□ 0.21
TPCN1-213ENST00000550543 YTHDC1Q96MU7 727 aaKnown RBP16.35■□□□□ 0.21
TPCN1-213ENST00000550543 LMAN2LQ9H0V9 348 aa16.35■□□□□ 0.21
TPCN1-213ENST00000550543 PSTPIP2Q9H939 334 aa16.35■□□□□ 0.21
TPCN1-213ENST00000550543 SETD4Q9NVD3 440 aa16.35■□□□□ 0.21
TPCN1-213ENST00000550543 TRANK1O15050 2925 aa16.35■□□□□ 0.21
TPCN1-213ENST00000550543 COL4A6Q14031 1691 aa16.34■□□□□ 0.21
TPCN1-213ENST00000550543 H3BNC9 293 aa16.34■□□□□ 0.21
TPCN1-213ENST00000550543 CTSHP09668 335 aa16.34■□□□□ 0.21
TPCN1-213ENST00000550543 LIFRP42702 1097 aa16.34■□□□□ 0.21
TPCN1-213ENST00000550543 PTH1RQ03431 593 aa16.34■□□□□ 0.21
TPCN1-213ENST00000550543 EPC2Q52LR7 807 aa16.34■□□□□ 0.21
TPCN1-213ENST00000550543 UTP14CQ5TAP6 766 aaKnown RBP16.34■□□□□ 0.21
TPCN1-213ENST00000550543 SYNE3Q6ZMZ3 975 aa16.34■□□□□ 0.21
TPCN1-213ENST00000550543 LMBR1Q8WVP7 490 aa16.34■□□□□ 0.21
TPCN1-213ENST00000550543 SEPT1Q8WYJ6 367 aa16.34■□□□□ 0.21
TPCN1-213ENST00000550543 IL17RAQ96F46 866 aa16.34■□□□□ 0.21
TPCN1-213ENST00000550543 C11orf84Q9BUA3 381 aaPredicted RBP16.34■□□□□ 0.21
TPCN1-213ENST00000550543 IL25Q9H293 177 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms