RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 KCNH7Q9NS40 1196 aa29.55■■■□□ 2.32
CPSF6-205ENST00000550075 F2P00734 622 aa29.54■■■□□ 2.32
CPSF6-205ENST00000550075 ZNF286BP0CG31 522 aa29.54■■■□□ 2.32
CPSF6-205ENST00000550075 MAGEA10P43363 369 aaPredicted RBP29.54■■■□□ 2.32
CPSF6-205ENST00000550075 CRYGNQ8WXF5 182 aa29.54■■■□□ 2.32
CPSF6-205ENST00000550075 SDF4Q9BRK5 362 aa29.54■■■□□ 2.32
CPSF6-205ENST00000550075 PHF20Q9BVI0 1012 aa29.54■■■□□ 2.32
CPSF6-205ENST00000550075 BRMS1Q9HCU9 246 aa29.54■■■□□ 2.32
CPSF6-205ENST00000550075 PKD2L1Q9P0L9 805 aa29.54■■■□□ 2.32
CPSF6-205ENST00000550075 MEIS1O00470 390 aa29.53■■■□□ 2.32
CPSF6-205ENST00000550075 ADAMTS3O15072 1205 aa29.53■■■□□ 2.32
CPSF6-205ENST00000550075 SUPT20HL2P0C7V6 817 aa29.53■■■□□ 2.32
CPSF6-205ENST00000550075 RAG1P15918 1043 aa29.53■■■□□ 2.32
CPSF6-205ENST00000550075 CHMP4BP1P59074 171 aa29.53■■■□□ 2.32
CPSF6-205ENST00000550075 TRIM29Q14134 588 aa29.53■■■□□ 2.32
CPSF6-205ENST00000550075 KRT25Q7Z3Z0 450 aa29.53■■■□□ 2.32
CPSF6-205ENST00000550075 PLA2G4DQ86XP0 818 aa29.53■■■□□ 2.32
CPSF6-205ENST00000550075 KCNJ14Q9UNX9 436 aa29.53■■■□□ 2.32
CPSF6-205ENST00000550075 CD4P01730 458 aa29.52■■■□□ 2.32
CPSF6-205ENST00000550075 PSEN2P49810 448 aa29.52■■■□□ 2.32
CPSF6-205ENST00000550075 SP4Q02446 784 aa29.52■■■□□ 2.32
CPSF6-205ENST00000550075 SH3RF1Q7Z6J0 888 aa29.52■■■□□ 2.32
CPSF6-205ENST00000550075 KAT2BQ92831 832 aa29.52■■■□□ 2.32
CPSF6-205ENST00000550075 GPR20Q99678 358 aa29.52■■■□□ 2.32
CPSF6-205ENST00000550075 GDF15Q99988 308 aa29.52■■■□□ 2.32
CPSF6-205ENST00000550075 TBX21Q9UL17 535 aa29.52■■■□□ 2.32
CPSF6-205ENST00000550075 NFASCO94856 1347 aa29.51■■■□□ 2.32
CPSF6-205ENST00000550075 TRIM43BA6NCK2 446 aa29.51■■■□□ 2.31
CPSF6-205ENST00000550075 JAK2O60674 1132 aa29.51■■■□□ 2.31
CPSF6-205ENST00000550075 ATP9AO75110 1047 aa29.51■■■□□ 2.31
CPSF6-205ENST00000550075 FDPSP14324 419 aaKnown RBP29.51■■■□□ 2.31
CPSF6-205ENST00000550075 MCM2P49736 904 aa29.51■■■□□ 2.31
CPSF6-205ENST00000550075 ST3GAL1Q11201 340 aa29.51■■■□□ 2.31
CPSF6-205ENST00000550075 MFSD10Q14728 455 aa29.51■■■□□ 2.31
CPSF6-205ENST00000550075 CYP2W1Q8TAV3 490 aa29.51■■■□□ 2.31
CPSF6-205ENST00000550075 TRIM43Q96BQ3 446 aaPredicted RBP29.51■■■□□ 2.31
CPSF6-205ENST00000550075 JPH1Q9HDC5 661 aaPredicted RBP29.51■■■□□ 2.31
CPSF6-205ENST00000550075 ZNF215Q9UL58 517 aaPredicted RBP29.51■■■□□ 2.31
CPSF6-205ENST00000550075 COLQQ9Y215 455 aaPredicted RBP29.51■■■□□ 2.31
CPSF6-205ENST00000550075 CCDC194A0A1B0GVG4 234 aa29.5■■■□□ 2.31
CPSF6-205ENST00000550075 FAM86B1E9PN63 330 aa29.5■■■□□ 2.31
CPSF6-205ENST00000550075 B4GALT4O60513 344 aa29.5■■■□□ 2.31
CPSF6-205ENST00000550075 LGALS2P05162 132 aa29.5■■■□□ 2.31
CPSF6-205ENST00000550075 FAM86B2P0C5J1 330 aa29.5■■■□□ 2.31
CPSF6-205ENST00000550075 CIITAP33076 1130 aa29.5■■■□□ 2.31
CPSF6-205ENST00000550075 USP11P51784 963 aa29.5■■■□□ 2.31
CPSF6-205ENST00000550075 HMGN5P82970 282 aaKnown RBP29.5■■■□□ 2.31
CPSF6-205ENST00000550075 MDM2Q00987 491 aaPredicted RBP29.5■■■□□ 2.31
CPSF6-205ENST00000550075 NONOQ15233 471 aaKnown RBP eCLIP29.5■■■□□ 2.312e-6■■■□□ 18.6
CPSF6-205ENST00000550075 NPY5RQ15761 445 aa29.5■■■□□ 2.31
CPSF6-205ENST00000550075 SESTD1Q86VW0 696 aa29.5■■■□□ 2.31
CPSF6-205ENST00000550075 C7orf31Q8N865 590 aa29.5■■■□□ 2.31
CPSF6-205ENST00000550075 TBCKQ8TEA7 893 aa29.5■■■□□ 2.31
CPSF6-205ENST00000550075 BCAS3Q9H6U6 928 aa29.5■■■□□ 2.31
CPSF6-205ENST00000550075 AGO4Q9HCK5 861 aaKnown RBP29.5■■■□□ 2.31
CPSF6-205ENST00000550075 NOD1Q9Y239 953 aa29.5■■■□□ 2.31
CPSF6-205ENST00000550075 ARP10275 920 aa29.49■■■□□ 2.31
CPSF6-205ENST00000550075 BMP8BP34820 402 aa29.49■■■□□ 2.31
CPSF6-205ENST00000550075 KIAA0753Q2KHM9 967 aa29.49■■■□□ 2.31
CPSF6-205ENST00000550075 UBE2OQ9C0C9 1292 aaKnown RBP29.49■■■□□ 2.31
CPSF6-205ENST00000550075 TRPV6Q9H1D0 765 aa29.49■■■□□ 2.31
CPSF6-205ENST00000550075 SLC9A2Q9UBY0 812 aa29.49■■■□□ 2.31
CPSF6-205ENST00000550075 TCEAL9Q9UHQ7 104 aa29.49■■■□□ 2.31
CPSF6-205ENST00000550075 IGLV3-22A0A075B6J6 115 aa29.48■■■□□ 2.31
CPSF6-205ENST00000550075 A0A1W2PPC1 479 aa29.48■■■□□ 2.31
CPSF6-205ENST00000550075 M0R2N6 131 aa29.48■■■□□ 2.31
CPSF6-205ENST00000550075 HAS3O00219 553 aa29.48■■■□□ 2.31
CPSF6-205ENST00000550075 DTNBO60941 627 aa29.48■■■□□ 2.31
CPSF6-205ENST00000550075 SEPT1Q8WYJ6 367 aa29.48■■■□□ 2.31
CPSF6-205ENST00000550075 C16orf70Q9BSU1 422 aa29.48■■■□□ 2.31
CPSF6-205ENST00000550075 H3BRB1 525 aa29.47■■■□□ 2.31
CPSF6-205ENST00000550075 KRT2P35908 639 aa29.47■■■□□ 2.31
CPSF6-205ENST00000550075 TCF7P36402 384 aaPredicted RBP29.47■■■□□ 2.31
CPSF6-205ENST00000550075 PRR16Q569H4 304 aa29.47■■■□□ 2.31
CPSF6-205ENST00000550075 ZNF577Q9BSK1 485 aa29.47■■■□□ 2.31
CPSF6-205ENST00000550075 PRO3102Q9H379 93 aa29.47■■■□□ 2.31
CPSF6-205ENST00000550075 TUT1Q9H6E5 874 aaKnown RBP29.47■■■□□ 2.31
CPSF6-205ENST00000550075 IPO5O00410 1097 aaKnown RBP29.46■■■□□ 2.31
CPSF6-205ENST00000550075 TIMP1P01033 207 aa29.46■■■□□ 2.31
CPSF6-205ENST00000550075 UTP14CQ5TAP6 766 aaKnown RBP29.46■■■□□ 2.31
CPSF6-205ENST00000550075 BADQ92934 168 aa29.46■■■□□ 2.31
CPSF6-205ENST00000550075 HIPK3Q9H422 1215 aa29.46■■■□□ 2.31
CPSF6-205ENST00000550075 GJB4Q9NTQ9 266 aa29.46■■■□□ 2.31
CPSF6-205ENST00000550075 TRMT13Q9NUP7 481 aaKnown RBP29.46■■■□□ 2.31
CPSF6-205ENST00000550075 ITGB3BPQ13352 177 aaPredicted RBP29.45■■■□□ 2.31
CPSF6-205ENST00000550075 FAM184AQ8NB25 1140 aa29.45■■■□□ 2.31
CPSF6-205ENST00000550075 PPP1R12CQ9BZL4 782 aa29.45■■■□□ 2.31
CPSF6-205ENST00000550075 TBC1D22BQ9NU19 505 aa29.45■■■□□ 2.31
CPSF6-205ENST00000550075 GTF2IRD1Q9UHL9 959 aa29.45■■■□□ 2.31
CPSF6-205ENST00000550075 KIF3AQ9Y496 699 aa29.45■■■□□ 2.31
CPSF6-205ENST00000550075 TRIOBPQ9H2D6 2365 aa29.45■■■□□ 2.3
CPSF6-205ENST00000550075 MMP1P03956 469 aa29.44■■■□□ 2.3
CPSF6-205ENST00000550075 FPGSQ05932 587 aa29.44■■■□□ 2.3
CPSF6-205ENST00000550075 MOXD1Q6UVY6 613 aa29.44■■■□□ 2.3
CPSF6-205ENST00000550075 CCDC155Q8N6L0 562 aa29.44■■■□□ 2.3
CPSF6-205ENST00000550075 NAP1L4Q99733 375 aaKnown RBP29.44■■■□□ 2.3
CPSF6-205ENST00000550075 HDAC6Q9UBN7 1215 aa29.44■■■□□ 2.3
CPSF6-205ENST00000550075 FOSBP53539 338 aa29.43■■■□□ 2.3
CPSF6-205ENST00000550075 SAFBQ15424 915 aaKnown RBP eCLIP29.43■■■□□ 2.3
CPSF6-205ENST00000550075 PTGISQ16647 500 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms