RNA–Protein interactions for RNA: ENST00000549766.5

TGFBR1-207, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 5

Gene TGFBR1, Length 1,678 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-207ENST00000549766 MAP1SQ66K74 1059 aaPredicted RBP27.46■■□□□ 1.99
TGFBR1-207ENST00000549766 DDX12PQ92771 950 aa27.46■■□□□ 1.99
TGFBR1-207ENST00000549766 DNAJC19Q96DA6 116 aa27.46■■□□□ 1.99
TGFBR1-207ENST00000549766 A1CFQ9NQ94 594 aaKnown RBP27.46■■□□□ 1.99
TGFBR1-207ENST00000549766 CYP39A1Q9NYL5 469 aa27.46■■□□□ 1.99
TGFBR1-207ENST00000549766 CLEC11AQ9Y240 323 aa27.46■■□□□ 1.99
TGFBR1-207ENST00000549766 POTEFA5A3E0 1075 aa27.45■■□□□ 1.98
TGFBR1-207ENST00000549766 PLA2G4BP0C869 781 aa27.45■■□□□ 1.98
TGFBR1-207ENST00000549766 POTEGQ6S5H5 508 aa27.45■■□□□ 1.98
TGFBR1-207ENST00000549766 CHST13Q8NET6 341 aa27.45■■□□□ 1.98
TGFBR1-207ENST00000549766 PURBQ96QR8 312 aaKnown RBP27.45■■□□□ 1.98
TGFBR1-207ENST00000549766 SAMSN1Q9NSI8 373 aaKnown RBP27.45■■□□□ 1.98
TGFBR1-207ENST00000549766 BTBD7Q9P203 1132 aa27.45■■□□□ 1.98
TGFBR1-207ENST00000549766 TPM3P06753 285 aa27.44■■□□□ 1.98
TGFBR1-207ENST00000549766 SLC12A3P55017 1021 aa27.44■■□□□ 1.98
TGFBR1-207ENST00000549766 STX17P56962 302 aa27.44■■□□□ 1.98
TGFBR1-207ENST00000549766 CDKAL1Q5VV42 579 aa27.44■■□□□ 1.98
TGFBR1-207ENST00000549766 TEKT3Q9BXF9 490 aa27.44■■□□□ 1.98
TGFBR1-207ENST00000549766 TUFT1Q9NNX1 390 aa27.44■■□□□ 1.98
TGFBR1-207ENST00000549766 DHX15O43143 795 aaKnown RBP27.43■■□□□ 1.98
TGFBR1-207ENST00000549766 MUTP22033 750 aa27.43■■□□□ 1.98
TGFBR1-207ENST00000549766 STK4Q13043 487 aa27.43■■□□□ 1.98
TGFBR1-207ENST00000549766 ARHGEF16Q5VV41 709 aa27.43■■□□□ 1.98
TGFBR1-207ENST00000549766 RIOX2Q8IUF8 465 aa27.43■■□□□ 1.98
TGFBR1-207ENST00000549766 ZNF784Q8NCA9 323 aaPredicted RBP27.43■■□□□ 1.98
TGFBR1-207ENST00000549766 NELFBQ8WX92 580 aa27.43■■□□□ 1.98
TGFBR1-207ENST00000549766 UNC45AQ9H3U1 944 aa27.43■■□□□ 1.98
TGFBR1-207ENST00000549766 AGO4Q9HCK5 861 aaKnown RBP27.43■■□□□ 1.98
TGFBR1-207ENST00000549766 ZKSCAN5Q9Y2L8 839 aa27.43■■□□□ 1.98
TGFBR1-207ENST00000549766 TRAF5O00463 557 aa27.43■■□□□ 1.98
TGFBR1-207ENST00000549766 GJA5P36382 358 aa27.43■■□□□ 1.98
TGFBR1-207ENST00000549766 PPP1R2P41236 205 aa27.43■■□□□ 1.98
TGFBR1-207ENST00000549766 PLS1Q14651 629 aa27.43■■□□□ 1.98
TGFBR1-207ENST00000549766 DYMQ7RTS9 669 aa27.43■■□□□ 1.98
TGFBR1-207ENST00000549766 VSIG10LQ86VR7 867 aa27.43■■□□□ 1.98
TGFBR1-207ENST00000549766 DRC7Q8IY82 874 aa27.43■■□□□ 1.98
TGFBR1-207ENST00000549766 ASCC2Q9H1I8 757 aaPredicted RBP27.43■■□□□ 1.98
TGFBR1-207ENST00000549766 DNM3Q9UQ16 869 aa27.43■■□□□ 1.98
TGFBR1-207ENST00000549766 SLITRK3O94933 977 aa27.42■■□□□ 1.98
TGFBR1-207ENST00000549766 CYP11B2P19099 503 aa27.42■■□□□ 1.98
TGFBR1-207ENST00000549766 IRX3P78415 501 aaPredicted RBP27.42■■□□□ 1.98
TGFBR1-207ENST00000549766 EPHA7Q15375 998 aa27.42■■□□□ 1.98
TGFBR1-207ENST00000549766 FASTKD5Q7L8L6 764 aaKnown RBP27.42■■□□□ 1.98
TGFBR1-207ENST00000549766 SYT2Q8N9I0 419 aaPredicted RBP27.42■■□□□ 1.98
TGFBR1-207ENST00000549766 CBFA2T2O43439 604 aa27.41■■□□□ 1.98
TGFBR1-207ENST00000549766 SERPINC1P01008 464 aa27.41■■□□□ 1.98
TGFBR1-207ENST00000549766 FCER1AP12319 257 aa27.41■■□□□ 1.98
TGFBR1-207ENST00000549766 UBASH3AP57075 661 aa27.41■■□□□ 1.98
TGFBR1-207ENST00000549766 PSMC6P62333 389 aa27.41■■□□□ 1.98
TGFBR1-207ENST00000549766 STIM1Q13586 685 aa27.41■■□□□ 1.98
TGFBR1-207ENST00000549766 MTMR1Q13613 665 aa27.41■■□□□ 1.98
TGFBR1-207ENST00000549766 GPAT2Q6NUI2 795 aa27.41■■□□□ 1.98
TGFBR1-207ENST00000549766 KIAA0895Q8NCT3 520 aa27.41■■□□□ 1.98
TGFBR1-207ENST00000549766 NSUN6Q8TEA1 469 aaKnown RBP27.41■■□□□ 1.98
TGFBR1-207ENST00000549766 DHTKD1Q96HY7 919 aaPredicted RBP27.41■■□□□ 1.98
TGFBR1-207ENST00000549766 RGL1Q9NZL6 768 aa27.41■■□□□ 1.98
TGFBR1-207ENST00000549766 NRBP1Q9UHY1 535 aa27.41■■□□□ 1.98
TGFBR1-207ENST00000549766 MAPK8IP1Q9UQF2 711 aa27.41■■□□□ 1.98
TGFBR1-207ENST00000549766 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.41■■□□□ 1.98
TGFBR1-207ENST00000549766 NR3C2P08235 984 aa27.4■■□□□ 1.98
TGFBR1-207ENST00000549766 CCND2P30279 289 aa27.4■■□□□ 1.98
TGFBR1-207ENST00000549766 HERVK_113P62684 666 aa27.4■■□□□ 1.98
TGFBR1-207ENST00000549766 PSMD2Q13200 908 aa27.4■■□□□ 1.98
TGFBR1-207ENST00000549766 ITGB3BPQ13352 177 aaPredicted RBP27.4■■□□□ 1.98
TGFBR1-207ENST00000549766 BMP2KQ9NSY1 1161 aaPredicted RBP27.4■■□□□ 1.98
TGFBR1-207ENST00000549766 PSMA7O14818 248 aa27.4■■□□□ 1.98
TGFBR1-207ENST00000549766 CNMDO75829 334 aa27.4■■□□□ 1.98
TGFBR1-207ENST00000549766 MYCLP12524 364 aaPredicted RBP27.4■■□□□ 1.98
TGFBR1-207ENST00000549766 CYP4A11Q02928 519 aa27.4■■□□□ 1.98
TGFBR1-207ENST00000549766 CCDC144BQ3MJ40 725 aa27.4■■□□□ 1.98
TGFBR1-207ENST00000549766 ARSHQ5FYA8 562 aa27.4■■□□□ 1.98
TGFBR1-207ENST00000549766 APTXQ7Z2E3 356 aaKnown RBP27.4■■□□□ 1.98
TGFBR1-207ENST00000549766 CCDC186Q7Z3E2 898 aa27.4■■□□□ 1.98
TGFBR1-207ENST00000549766 FAM43AQ8N2R8 423 aa27.4■■□□□ 1.98
TGFBR1-207ENST00000549766 NAP1L5Q96NT1 182 aaPredicted RBP27.4■■□□□ 1.98
TGFBR1-207ENST00000549766 SPATC1LQ9H0A9 340 aa27.4■■□□□ 1.98
TGFBR1-207ENST00000549766 FBXO40Q9UH90 709 aa27.4■■□□□ 1.98
TGFBR1-207ENST00000549766 FRMD3A2A2Y4 597 aa27.39■■□□□ 1.97
TGFBR1-207ENST00000549766 CHMP2AO43633 222 aa27.39■■□□□ 1.97
TGFBR1-207ENST00000549766 FKBP1BP68106 108 aa27.39■■□□□ 1.97
TGFBR1-207ENST00000549766 GPBP1Q86WP2 473 aa27.39■■□□□ 1.97
TGFBR1-207ENST00000549766 SLC10A4Q96EP9 437 aa27.39■■□□□ 1.97
TGFBR1-207ENST00000549766 DYDC2Q96IM9 177 aa27.39■■□□□ 1.97
TGFBR1-207ENST00000549766 RRAGCQ9HB90 399 aa27.39■■□□□ 1.97
TGFBR1-207ENST00000549766 EYA4O95677 639 aa27.38■■□□□ 1.97
TGFBR1-207ENST00000549766 SNAPC2Q13487 334 aa27.38■■□□□ 1.97
TGFBR1-207ENST00000549766 NEK9Q8TD19 979 aa27.38■■□□□ 1.97
TGFBR1-207ENST00000549766 GPRASP2Q96D09 838 aa27.38■■□□□ 1.97
TGFBR1-207ENST00000549766 INPP4AQ96PE3 977 aaPredicted RBP27.38■■□□□ 1.97
TGFBR1-207ENST00000549766 TBC1D22BQ9NU19 505 aa27.38■■□□□ 1.97
TGFBR1-207ENST00000549766 INTS13Q9NVM9 706 aa27.38■■□□□ 1.97
TGFBR1-207ENST00000549766 IMPACTQ9P2X3 320 aa27.38■■□□□ 1.97
TGFBR1-207ENST00000549766 MAFGO15525 162 aa27.37■■□□□ 1.97
TGFBR1-207ENST00000549766 PEX10O60683 326 aa27.37■■□□□ 1.97
TGFBR1-207ENST00000549766 SSBP05455 408 aaKnown RBP eCLIP27.37■■□□□ 1.97
TGFBR1-207ENST00000549766 CDK11BP21127 795 aaKnown RBP27.37■■□□□ 1.97
TGFBR1-207ENST00000549766 PTGS1P23219 599 aa27.37■■□□□ 1.97
TGFBR1-207ENST00000549766 PMS1P54277 932 aaKnown RBP27.37■■□□□ 1.97
TGFBR1-207ENST00000549766 COASYQ13057 564 aa27.37■■□□□ 1.97
TGFBR1-207ENST00000549766 PABPC4Q13310 644 aaKnown RBP eCLIP27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms