RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 PSMA5P28066 241 aa21.39■■□□□ 1.01
CHMP1A-207ENST00000549328 CDC27P30260 824 aa21.39■■□□□ 1.01
CHMP1A-207ENST00000549328 Q6ZUG5 572 aa21.39■■□□□ 1.01
CHMP1A-207ENST00000549328 GPR20Q99678 358 aa21.39■■□□□ 1.01
CHMP1A-207ENST00000549328 GLT8D2Q9H1C3 349 aa21.39■■□□□ 1.01
CHMP1A-207ENST00000549328 EHMT1Q9H9B1 1298 aa21.39■■□□□ 1.01
CHMP1A-207ENST00000549328 RIC8AQ9NPQ8 531 aa21.39■■□□□ 1.01
CHMP1A-207ENST00000549328 UBIAD1Q9Y5Z9 338 aa21.39■■□□□ 1.01
CHMP1A-207ENST00000549328 TRIP12Q14669 1992 aaPredicted RBP21.39■■□□□ 1.01
CHMP1A-207ENST00000549328 SCN5AQ14524 2016 aa21.38■■□□□ 1.01
CHMP1A-207ENST00000549328 ZBBXA8MT70 800 aa21.38■■□□□ 1.01
CHMP1A-207ENST00000549328 FOSP01100 380 aaPredicted RBP21.38■■□□□ 1.01
CHMP1A-207ENST00000549328 CKBP12277 381 aa21.38■■□□□ 1.01
CHMP1A-207ENST00000549328 CPA1P15085 419 aa21.38■■□□□ 1.01
CHMP1A-207ENST00000549328 ITGB5P18084 799 aa21.38■■□□□ 1.01
CHMP1A-207ENST00000549328 NAPAP54920 295 aa21.38■■□□□ 1.01
CHMP1A-207ENST00000549328 GRIN2CQ14957 1233 aa21.38■■□□□ 1.01
CHMP1A-207ENST00000549328 LRRC8DQ7L1W4 858 aa21.38■■□□□ 1.01
CHMP1A-207ENST00000549328 MYLIPQ8WY64 445 aa21.38■■□□□ 1.01
CHMP1A-207ENST00000549328 AGXT2Q9BYV1 514 aa21.38■■□□□ 1.01
CHMP1A-207ENST00000549328 FTOQ9C0B1 505 aaKnown RBP eCLIP21.38■■□□□ 1.01
CHMP1A-207ENST00000549328 BARHL2Q9NY43 387 aa21.38■■□□□ 1.01
CHMP1A-207ENST00000549328 TANC1Q9C0D5 1861 aa21.37■■□□□ 1.01
CHMP1A-207ENST00000549328 CDH23Q9H251 3354 aa21.37■■□□□ 1.01
CHMP1A-207ENST00000549328 ATP2A2P16615 1042 aaKnown RBP21.37■■□□□ 1.01
CHMP1A-207ENST00000549328 RPS6KB1P23443 525 aa21.37■■□□□ 1.01
CHMP1A-207ENST00000549328 HOXC8P31273 242 aa21.37■■□□□ 1.01
CHMP1A-207ENST00000549328 METAP2P50579 478 aaKnown RBP eCLIP21.37■■□□□ 1.01
CHMP1A-207ENST00000549328 APOBRQ0VD83 1088 aa21.37■■□□□ 1.01
CHMP1A-207ENST00000549328 ERICH6BQ5W0A0 696 aa21.37■■□□□ 1.01
CHMP1A-207ENST00000549328 TYW1BQ6NUM6 668 aa21.37■■□□□ 1.01
CHMP1A-207ENST00000549328 BRF1Q92994 677 aa21.37■■□□□ 1.01
CHMP1A-207ENST00000549328 NAP1L2Q9ULW6 460 aaPredicted RBP21.37■■□□□ 1.01
CHMP1A-207ENST00000549328 STXBP3O00186 592 aa21.36■■□□□ 1.01
CHMP1A-207ENST00000549328 BAIAP3O94812 1187 aa21.36■■□□□ 1.01
CHMP1A-207ENST00000549328 KCNA2P16389 499 aa21.36■■□□□ 1.01
CHMP1A-207ENST00000549328 ADD1P35611 737 aaKnown RBP21.36■■□□□ 1.01
CHMP1A-207ENST00000549328 ADCY7P51828 1080 aa21.36■■□□□ 1.01
CHMP1A-207ENST00000549328 MTMR1Q13613 665 aa21.36■■□□□ 1.01
CHMP1A-207ENST00000549328 HIC1Q14526 733 aa21.36■■□□□ 1.01
CHMP1A-207ENST00000549328 GPNMBQ14956 572 aa21.36■■□□□ 1.01
CHMP1A-207ENST00000549328 TRIM71Q2Q1W2 868 aaKnown RBP21.36■■□□□ 1.01
CHMP1A-207ENST00000549328 SERINC5Q86VE9 423 aa21.36■■□□□ 1.01
CHMP1A-207ENST00000549328 PHOSPHO2Q8TCD6 241 aa21.36■■□□□ 1.01
CHMP1A-207ENST00000549328 SLC28A3Q9HAS3 691 aa21.36■■□□□ 1.01
CHMP1A-207ENST00000549328 JADE2Q9NQC1 790 aa21.36■■□□□ 1.01
CHMP1A-207ENST00000549328 ZNF215Q9UL58 517 aaPredicted RBP21.36■■□□□ 1.01
CHMP1A-207ENST00000549328 PCDHA11Q9Y5I1 949 aa21.36■■□□□ 1.01
CHMP1A-207ENST00000549328 NID2Q14112 1375 aa21.36■■□□□ 1.01
CHMP1A-207ENST00000549328 C17orf102A2RUQ5 167 aa21.35■■□□□ 1.01
CHMP1A-207ENST00000549328 SMCO2A6NFE2 343 aa21.35■■□□□ 1.01
CHMP1A-207ENST00000549328 ATP9AO75110 1047 aa21.35■■□□□ 1.01
CHMP1A-207ENST00000549328 CXCL10P02778 98 aa21.35■■□□□ 1.01
CHMP1A-207ENST00000549328 FOSL2P15408 326 aa21.35■■□□□ 1.01
CHMP1A-207ENST00000549328 ZNF200P98182 395 aaPredicted RBP21.35■■□□□ 1.01
CHMP1A-207ENST00000549328 PFKFB3Q16875 520 aaPredicted RBP21.35■■□□□ 1.01
CHMP1A-207ENST00000549328 MAFAQ8NHW3 353 aaPredicted RBP21.35■■□□□ 1.01
CHMP1A-207ENST00000549328 SLC9A7Q96T83 725 aa21.35■■□□□ 1.01
CHMP1A-207ENST00000549328 RNPEPQ9H4A4 650 aa21.35■■□□□ 1.01
CHMP1A-207ENST00000549328 PPP4R2Q9NY27 417 aa21.35■■□□□ 1.01
CHMP1A-207ENST00000549328 TET1Q8NFU7 2136 aa21.35■■□□□ 1.01
CHMP1A-207ENST00000549328 SMIM10L2AP0DMW4 78 aa21.34■■□□□ 1.01
CHMP1A-207ENST00000549328 SMIM10L2BP0DMW5 78 aa21.34■■□□□ 1.01
CHMP1A-207ENST00000549328 GNAT1P11488 350 aa21.34■■□□□ 1.01
CHMP1A-207ENST00000549328 EVCP57679 992 aa21.34■■□□□ 1.01
CHMP1A-207ENST00000549328 AP3B2Q13367 1082 aa21.34■■□□□ 1.01
CHMP1A-207ENST00000549328 SEPT1Q8WYJ6 367 aa21.34■■□□□ 1.01
CHMP1A-207ENST00000549328 ATP6V0A1Q93050 837 aa21.34■■□□□ 1.01
CHMP1A-207ENST00000549328 YBX2Q9Y2T7 364 aaKnown RBP21.34■■□□□ 1.01
CHMP1A-207ENST00000549328 DOCK5Q9H7D0 1870 aa21.33■■□□□ 1.01
CHMP1A-207ENST00000549328 SCG2P13521 617 aa21.33■■□□□ 1.01
CHMP1A-207ENST00000549328 CLK2P49760 499 aaKnown RBP21.33■■□□□ 1.01
CHMP1A-207ENST00000549328 ZNF618Q5T7W0 954 aa21.33■■□□□ 1.01
CHMP1A-207ENST00000549328 TRAF7Q6Q0C0 670 aa21.33■■□□□ 1.01
CHMP1A-207ENST00000549328 WNT8BQ93098 351 aa21.33■■□□□ 1.01
CHMP1A-207ENST00000549328 MXRA8Q9BRK3 442 aa21.33■■□□□ 1.01
CHMP1A-207ENST00000549328 NKX2-4Q9H2Z4 354 aa21.33■■□□□ 1.01
CHMP1A-207ENST00000549328 MYO9BQ13459 2157 aa21.32■■□□□ 1
CHMP1A-207ENST00000549328 ESYT2A0FGR8 921 aa21.32■■□□□ 1
CHMP1A-207ENST00000549328 PRPF3O43395 683 aaKnown RBP21.32■■□□□ 1
CHMP1A-207ENST00000549328 NBNO60934 754 aa21.32■■□□□ 1
CHMP1A-207ENST00000549328 TCF7P36402 384 aaPredicted RBP21.32■■□□□ 1
CHMP1A-207ENST00000549328 RABGGTBP53611 331 aa21.32■■□□□ 1
CHMP1A-207ENST00000549328 SP4Q02446 784 aa21.32■■□□□ 1
CHMP1A-207ENST00000549328 UTP14CQ5TAP6 766 aaKnown RBP21.32■■□□□ 1
CHMP1A-207ENST00000549328 MCTP2Q6DN12 878 aa21.32■■□□□ 1
CHMP1A-207ENST00000549328 CNKSR3Q6P9H4 555 aa21.32■■□□□ 1
CHMP1A-207ENST00000549328 RUFY3Q7L099 469 aa21.32■■□□□ 1
CHMP1A-207ENST00000549328 TRIM50Q86XT4 487 aa21.32■■□□□ 1
CHMP1A-207ENST00000549328 ANO3Q9BYT9 981 aa21.32■■□□□ 1
CHMP1A-207ENST00000549328 ZSWIM6Q9HCJ5 1215 aa21.32■■□□□ 1
CHMP1A-207ENST00000549328 KCNH7Q9NS40 1196 aa21.32■■□□□ 1
CHMP1A-207ENST00000549328 TELO2Q9Y4R8 837 aa21.32■■□□□ 1
CHMP1A-207ENST00000549328 GSTTP1A0A1W2PQM5 241 aa21.31■■□□□ 1
CHMP1A-207ENST00000549328 TREHO43280 583 aa21.31■■□□□ 1
CHMP1A-207ENST00000549328 CAND2O75155 1236 aa21.31■■□□□ 1
CHMP1A-207ENST00000549328 SREBF1P36956 1147 aa21.31■■□□□ 1
CHMP1A-207ENST00000549328 ADAM17P78536 824 aa21.31■■□□□ 1
CHMP1A-207ENST00000549328 CEP55Q53EZ4 464 aa21.31■■□□□ 1
CHMP1A-207ENST00000549328 CCDC12Q8WUD4 166 aaPredicted RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms