RNA–Protein interactions for RNA: ENST00000549275.5

TROAP-209, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene TROAP, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-209ENST00000549275 NELL1Q92832 810 aa12.61□□□□□ -0.39
TROAP-209ENST00000549275 NUP88Q99567 741 aaPredicted RBP12.61□□□□□ -0.39
TROAP-209ENST00000549275 ADAM33Q9BZ11 813 aa12.61□□□□□ -0.39
TROAP-209ENST00000549275 MCM9Q9NXL9 1143 aa12.61□□□□□ -0.39
TROAP-209ENST00000549275 IGSF9Q9P2J2 1179 aa12.61□□□□□ -0.39
TROAP-209ENST00000549275 FEM1BQ9UK73 627 aa12.61□□□□□ -0.39
TROAP-209ENST00000549275 POTEMA6NI47 508 aa12.6□□□□□ -0.39
TROAP-209ENST00000549275 TM4SF5O14894 197 aa12.6□□□□□ -0.39
TROAP-209ENST00000549275 RETP07949 1114 aa12.6□□□□□ -0.39
TROAP-209ENST00000549275 TFCP2Q12800 502 aa12.6□□□□□ -0.39
TROAP-209ENST00000549275 ATAT1Q5SQI0 421 aa12.6□□□□□ -0.39
TROAP-209ENST00000549275 LAIR1Q6GTX8 287 aa12.6□□□□□ -0.39
TROAP-209ENST00000549275 XRRA1Q6P2D8 792 aa12.6□□□□□ -0.39
TROAP-209ENST00000549275 POTEGQ6S5H5 508 aa12.6□□□□□ -0.39
TROAP-209ENST00000549275 GLIS3Q8NEA6 775 aa12.6□□□□□ -0.39
TROAP-209ENST00000549275 GPR20Q99678 358 aa12.6□□□□□ -0.39
TROAP-209ENST00000549275 HNRNPABQ99729 332 aaKnown RBP12.6□□□□□ -0.39
TROAP-209ENST00000549275 KCNK12Q9HB15 430 aa12.6□□□□□ -0.39
TROAP-209ENST00000549275 SEMA4GQ9NTN9 838 aa12.6□□□□□ -0.39
TROAP-209ENST00000549275 DBR1Q9UK59 544 aaKnown RBP12.6□□□□□ -0.39
TROAP-209ENST00000549275 RAB23Q9ULC3 237 aa12.6□□□□□ -0.39
TROAP-209ENST00000549275 PA2G4Q9UQ80 394 aaKnown RBP12.6□□□□□ -0.39
TROAP-209ENST00000549275 LOC400499M0QZD8 3231 aa12.6□□□□□ -0.39
TROAP-209ENST00000549275 NBEAQ8NFP9 2946 aa12.6□□□□□ -0.39
TROAP-209ENST00000549275 F5H6K3 240 aa12.59□□□□□ -0.39
TROAP-209ENST00000549275 FSCN2O14926 492 aa12.59□□□□□ -0.39
TROAP-209ENST00000549275 TXNP10599 105 aaKnown RBP12.59□□□□□ -0.39
TROAP-209ENST00000549275 ALDH5A1P51649 535 aaPredicted RBP12.59□□□□□ -0.39
TROAP-209ENST00000549275 KLRC3Q07444 240 aa12.59□□□□□ -0.39
TROAP-209ENST00000549275 NONOQ15233 471 aaKnown RBP eCLIP12.59□□□□□ -0.39
TROAP-209ENST00000549275 KIAA1841Q6NSI8 718 aa12.59□□□□□ -0.39
TROAP-209ENST00000549275 OTOP3Q7RTS5 596 aa12.59□□□□□ -0.39
TROAP-209ENST00000549275 PDZD3Q86UT5 571 aa12.59□□□□□ -0.39
TROAP-209ENST00000549275 AFG1LQ8WV93 481 aa12.59□□□□□ -0.39
TROAP-209ENST00000549275 GATA6Q92908 595 aa12.59□□□□□ -0.39
TROAP-209ENST00000549275 MAP4K1Q92918 833 aa12.59□□□□□ -0.39
TROAP-209ENST00000549275 TRERF1Q96PN7 1200 aa12.59□□□□□ -0.39
TROAP-209ENST00000549275 MPHOSPH6Q99547 160 aaKnown RBP12.59□□□□□ -0.39
TROAP-209ENST00000549275 NDUFB10O96000 172 aa12.58□□□□□ -0.4
TROAP-209ENST00000549275 CFHP08603 1231 aa12.58□□□□□ -0.4
TROAP-209ENST00000549275 PSEN2P49810 448 aa12.58□□□□□ -0.4
TROAP-209ENST00000549275 RPAP2Q8IXW5 612 aaPredicted RBP12.58□□□□□ -0.4
TROAP-209ENST00000549275 COPS5Q92905 334 aa12.58□□□□□ -0.4
TROAP-209ENST00000549275 FAM126AQ9BYI3 521 aaPredicted RBP12.58□□□□□ -0.4
TROAP-209ENST00000549275 SNRKQ9NRH2 765 aa12.58□□□□□ -0.4
TROAP-209ENST00000549275 CDH22Q9UJ99 828 aa12.58□□□□□ -0.4
TROAP-209ENST00000549275 FANCIQ9NVI1 1328 aa12.58□□□□□ -0.4
TROAP-209ENST00000549275 DSPP15924 2871 aaKnown RBP12.57□□□□□ -0.4
TROAP-209ENST00000549275 HAS3O00219 553 aa12.57□□□□□ -0.4
TROAP-209ENST00000549275 F2P00734 622 aa12.57□□□□□ -0.4
TROAP-209ENST00000549275 CSTF1Q05048 431 aaKnown RBP12.57□□□□□ -0.4
TROAP-209ENST00000549275 MFSD10Q14728 455 aa12.57□□□□□ -0.4
TROAP-209ENST00000549275 DGKDQ16760 1214 aa12.57□□□□□ -0.4
TROAP-209ENST00000549275 LLGL2Q6P1M3 1020 aa12.57□□□□□ -0.4
TROAP-209ENST00000549275 RASGRP2Q7LDG7 609 aa12.57□□□□□ -0.4
TROAP-209ENST00000549275 DHX37Q8IY37 1157 aaKnown RBP12.57□□□□□ -0.4
TROAP-209ENST00000549275 PJA1Q8NG27 643 aa12.57□□□□□ -0.4
TROAP-209ENST00000549275 BCO2Q9BYV7 579 aa12.57□□□□□ -0.4
TROAP-209ENST00000549275 SPATA6Q9NWH7 488 aaPredicted RBP12.57□□□□□ -0.4
TROAP-209ENST00000549275 HDAC5Q9UQL6 1122 aa12.57□□□□□ -0.4
TROAP-209ENST00000549275 PCDHB12Q9Y5F1 795 aa12.57□□□□□ -0.4
TROAP-209ENST00000549275 PPFIA3O75145 1194 aa12.56□□□□□ -0.4
TROAP-209ENST00000549275 KCNK5O95279 499 aa12.56□□□□□ -0.4
TROAP-209ENST00000549275 HOXD8P13378 290 aaPredicted RBP12.56□□□□□ -0.4
TROAP-209ENST00000549275 MAGEA9P43362 315 aa12.56□□□□□ -0.4
TROAP-209ENST00000549275 ERVFC1P60507 584 aa12.56□□□□□ -0.4
TROAP-209ENST00000549275 EVX2Q03828 476 aa12.56□□□□□ -0.4
TROAP-209ENST00000549275 C19orf57Q0VDD7 668 aa12.56□□□□□ -0.4
TROAP-209ENST00000549275 KIAA0753Q2KHM9 967 aa12.56□□□□□ -0.4
TROAP-209ENST00000549275 CELF5Q8N6W0 485 aaKnown RBP12.56□□□□□ -0.4
TROAP-209ENST00000549275 ZNF512BQ96KM6 892 aaPredicted RBP12.56□□□□□ -0.4
TROAP-209ENST00000549275 RIOK1Q9BRS2 568 aaKnown RBP12.56□□□□□ -0.4
TROAP-209ENST00000549275 ALG1Q9BT22 464 aa12.56□□□□□ -0.4
TROAP-209ENST00000549275 CRNKL1Q9BZJ0 848 aaKnown RBP12.56□□□□□ -0.4
TROAP-209ENST00000549275 NGRNQ9NPE2 291 aaKnown RBP12.56□□□□□ -0.4
TROAP-209ENST00000549275 AAASQ9NRG9 546 aa12.56□□□□□ -0.4
TROAP-209ENST00000549275 CA14Q9ULX7 337 aa12.56□□□□□ -0.4
TROAP-209ENST00000549275 WASF3Q9UPY6 502 aa12.56□□□□□ -0.4
TROAP-209ENST00000549275 NAV1Q8NEY1 1877 aa12.56□□□□□ -0.4
TROAP-209ENST00000549275 CACNA1IQ9P0X4 2223 aa12.56□□□□□ -0.4
TROAP-209ENST00000549275 ENPP3O14638 875 aa12.55□□□□□ -0.4
TROAP-209ENST00000549275 GDF9O60383 454 aa12.55□□□□□ -0.4
TROAP-209ENST00000549275 GH1P01241 217 aa12.55□□□□□ -0.4
TROAP-209ENST00000549275 SRFP11831 508 aa12.55□□□□□ -0.4
TROAP-209ENST00000549275 GLULP15104 373 aa12.55□□□□□ -0.4
TROAP-209ENST00000549275 EXOSC9Q06265 439 aaKnown RBP12.55□□□□□ -0.4
TROAP-209ENST00000549275 CCDC158Q5M9N0 1113 aa12.55□□□□□ -0.4
TROAP-209ENST00000549275 TTC39AQ5SRH9 613 aa12.55□□□□□ -0.4
TROAP-209ENST00000549275 WWC1Q8IX03 1113 aa12.55□□□□□ -0.4
TROAP-209ENST00000549275 PIK3R5Q8WYR1 880 aa12.55□□□□□ -0.4
TROAP-209ENST00000549275 DYNLL2Q96FJ2 89 aa12.55□□□□□ -0.4
TROAP-209ENST00000549275 PIH1D3Q9NQM4 214 aaKnown RBP12.55□□□□□ -0.4
TROAP-209ENST00000549275 ARHGEF3Q9NR81 526 aa12.55□□□□□ -0.4
TROAP-209ENST00000549275 NYAP2Q9P242 653 aa12.55□□□□□ -0.4
TROAP-209ENST00000549275 LZTS1Q9Y250 596 aa12.55□□□□□ -0.4
TROAP-209ENST00000549275 WDFY3Q8IZQ1 3526 aa12.55□□□□□ -0.4
TROAP-209ENST00000549275 USP9XQ93008 2570 aaPredicted RBP12.55□□□□□ -0.4
TROAP-209ENST00000549275 NARSO43776 548 aaKnown RBP12.54□□□□□ -0.4
TROAP-209ENST00000549275 ALAS1P13196 640 aa12.54□□□□□ -0.4
TROAP-209ENST00000549275 CDK8P49336 464 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms