RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 NEK8Q86SG6 692 aa15.11■□□□□ 0.01
HDAC7-228ENST00000548938 NBPF5PQ86XG9 351 aaPredicted RBP15.11■□□□□ 0.01
HDAC7-228ENST00000548938 PNMA5Q96PV4 448 aa15.11■□□□□ 0.01
HDAC7-228ENST00000548938 JPH2Q9BR39 696 aaPredicted RBP15.11■□□□□ 0.01
HDAC7-228ENST00000548938 CD248Q9HCU0 757 aa15.11■□□□□ 0.01
HDAC7-228ENST00000548938 MINPP1Q9UNW1 487 aa15.11■□□□□ 0.01
HDAC7-228ENST00000548938 GRID2IPA4D2P6 1211 aa15.11■□□□□ 0.01
HDAC7-228ENST00000548938 NOL4O94818 638 aa15.11■□□□□ 0.01
HDAC7-228ENST00000548938 FGFR1OPO95684 399 aaKnown RBP15.11■□□□□ 0.01
HDAC7-228ENST00000548938 FAM107AO95990 144 aa15.11■□□□□ 0.01
HDAC7-228ENST00000548938 SETQ01105 290 aaPredicted RBP15.11■□□□□ 0.01
HDAC7-228ENST00000548938 LRRC63Q05C16 580 aa15.11■□□□□ 0.01
HDAC7-228ENST00000548938 NAB2Q15742 525 aa15.11■□□□□ 0.01
HDAC7-228ENST00000548938 CDC37Q16543 378 aaPredicted RBP15.11■□□□□ 0.01
HDAC7-228ENST00000548938 MEI1Q5TIA1 1274 aa15.11■□□□□ 0.01
HDAC7-228ENST00000548938 CCDC24Q8N4L8 307 aa15.11■□□□□ 0.01
HDAC7-228ENST00000548938 PACSIN1Q9BY11 444 aa15.11■□□□□ 0.01
HDAC7-228ENST00000548938 ZMYND12Q9H0C1 365 aa15.11■□□□□ 0.01
HDAC7-228ENST00000548938 CXorf56Q9H5V9 222 aa15.11■□□□□ 0.01
HDAC7-228ENST00000548938 VCPKMTQ9H867 229 aa15.11■□□□□ 0.01
HDAC7-228ENST00000548938 PPANQ9NQ55 473 aaKnown RBP15.11■□□□□ 0.01
HDAC7-228ENST00000548938 STX8Q9UNK0 236 aa15.11■□□□□ 0.01
HDAC7-228ENST00000548938 CLSTN1O94985 981 aa15.1■□□□□ 0.01
HDAC7-228ENST00000548938 HSPA9P38646 679 aaKnown RBP15.1■□□□□ 0.01
HDAC7-228ENST00000548938 ARID5AQ03989 594 aa15.1■□□□□ 0.01
HDAC7-228ENST00000548938 ENOX2Q16206 610 aaKnown RBP15.1■□□□□ 0.01
HDAC7-228ENST00000548938 KCTD19Q17RG1 926 aaPredicted RBP15.1■□□□□ 0.01
HDAC7-228ENST00000548938 FAM83BQ5T0W9 1011 aa15.1■□□□□ 0.01
HDAC7-228ENST00000548938 TRAPPC3LQ5T215 181 aa15.1■□□□□ 0.01
HDAC7-228ENST00000548938 SFMBT2Q5VUG0 894 aa15.1■□□□□ 0.01
HDAC7-228ENST00000548938 CCDC13Q8IYE1 715 aa15.1■□□□□ 0.01
HDAC7-228ENST00000548938 SLC44A5Q8NCS7 719 aa15.1■□□□□ 0.01
HDAC7-228ENST00000548938 OR2W6PQ8NHA6 318 aa15.1■□□□□ 0.01
HDAC7-228ENST00000548938 TBC1D5Q92609 795 aa15.1■□□□□ 0.01
HDAC7-228ENST00000548938 LARP4BQ92615 738 aaKnown RBP15.1■□□□□ 0.01
HDAC7-228ENST00000548938 NYXQ9GZU5 481 aa15.1■□□□□ 0.01
HDAC7-228ENST00000548938 TFCP2L1Q9NZI6 479 aa15.1■□□□□ 0.01
HDAC7-228ENST00000548938 PCDHGC5Q9Y5F6 944 aa15.1■□□□□ 0.01
HDAC7-228ENST00000548938 SERPING1P05155 500 aa15.1■□□□□ 0.01
HDAC7-228ENST00000548938 RFC4P35249 363 aa15.1■□□□□ 0.01
HDAC7-228ENST00000548938 POLR2FP61218 127 aaKnown RBP15.1■□□□□ 0.01
HDAC7-228ENST00000548938 ERVK-9P63128 1117 aa15.1■□□□□ 0.01
HDAC7-228ENST00000548938 ACTN3Q08043 901 aaPredicted RBP15.1■□□□□ 0.01
HDAC7-228ENST00000548938 HLTFQ14527 1009 aaKnown RBP eCLIP15.1■□□□□ 0.01
HDAC7-228ENST00000548938 TBCKQ8TEA7 893 aa15.1■□□□□ 0.01
HDAC7-228ENST00000548938 ANKS1AQ92625 1134 aa15.1■□□□□ 0.01
HDAC7-228ENST00000548938 LSM14BQ9BX40 385 aaKnown RBP15.1■□□□□ 0.01
HDAC7-228ENST00000548938 EDEM3Q9BZQ6 932 aa15.1■□□□□ 0.01
HDAC7-228ENST00000548938 TMBIM4Q9HC24 238 aa15.1■□□□□ 0.01
HDAC7-228ENST00000548938 CEP72Q9P209 647 aa15.1■□□□□ 0.01
HDAC7-228ENST00000548938 TAF1LQ8IZX4 1826 aa15.1■□□□□ 0.01
HDAC7-228ENST00000548938 A0A087X0T9 212 aa15.09■□□□□ 0.01
HDAC7-228ENST00000548938 PVALEFA0A1B0GWK0 134 aa15.09■□□□□ 0.01
HDAC7-228ENST00000548938 PALM3A6NDB9 673 aaPredicted RBP15.09■□□□□ 0.01
HDAC7-228ENST00000548938 SMCO2A6NFE2 343 aa15.09■□□□□ 0.01
HDAC7-228ENST00000548938 FAM228BP0C875 321 aa15.09■□□□□ 0.01
HDAC7-228ENST00000548938 ECHS1P30084 290 aa15.09■□□□□ 0.01
HDAC7-228ENST00000548938 DDR1Q08345 913 aa15.09■□□□□ 0.01
HDAC7-228ENST00000548938 KRT27Q7Z3Y8 459 aa15.09■□□□□ 0.01
HDAC7-228ENST00000548938 FBXO33Q7Z6M2 555 aa15.09■□□□□ 0.01
HDAC7-228ENST00000548938 USP38Q8NB14 1042 aa15.09■□□□□ 0.01
HDAC7-228ENST00000548938 CYFIP2Q96F07 1278 aa15.09■□□□□ 0.01
HDAC7-228ENST00000548938 KANSL2Q9H9L4 492 aa15.09■□□□□ 0.01
HDAC7-228ENST00000548938 KLRF2D3W0D1 207 aa15.09■□□□□ 0.01
HDAC7-228ENST00000548938 MYBP10242 640 aa15.09■□□□□ 0.01
HDAC7-228ENST00000548938 HSD17B3P37058 310 aa15.09■□□□□ 0.01
HDAC7-228ENST00000548938 KIAA0753Q2KHM9 967 aa15.09■□□□□ 0.01
HDAC7-228ENST00000548938 C12orf60Q5U649 245 aa15.09■□□□□ 0.01
HDAC7-228ENST00000548938 C1orf131Q8NDD1 294 aaKnown RBP15.09■□□□□ 0.01
HDAC7-228ENST00000548938 CELF1Q92879 486 aaKnown RBP15.09■□□□□ 0.01
HDAC7-228ENST00000548938 TMEM47Q9BQJ4 181 aa15.09■□□□□ 0.01
HDAC7-228ENST00000548938 TAF1DQ9H5J8 278 aaPredicted RBP15.09■□□□□ 0.01
HDAC7-228ENST00000548938 MKNK2Q9HBH9 465 aa15.09■□□□□ 0.01
HDAC7-228ENST00000548938 BSDC1Q9NW68 430 aaPredicted RBP15.09■□□□□ 0.01
HDAC7-228ENST00000548938 ATP6V0A2Q9Y487 856 aa15.09■□□□□ 0.01
HDAC7-228ENST00000548938 POTEMA6NI47 508 aa15.08■□□□□ 0.01
HDAC7-228ENST00000548938 TSPY3P0CV98 308 aa15.08■□□□□ 0.01
HDAC7-228ENST00000548938 TSPY8P0CW00 308 aa15.08■□□□□ 0.01
HDAC7-228ENST00000548938 TNNC1P63316 161 aa15.08■□□□□ 0.01
HDAC7-228ENST00000548938 UAP1Q16222 522 aaPredicted RBP15.08■□□□□ 0.01
HDAC7-228ENST00000548938 CCDC40Q4G0X9 1142 aa15.08■□□□□ 0.01
HDAC7-228ENST00000548938 C6orf89Q6UWU4 347 aa15.08■□□□□ 0.01
HDAC7-228ENST00000548938 TPTE2Q6XPS3 522 aa15.08■□□□□ 0.01
HDAC7-228ENST00000548938 KCNK18Q7Z418 384 aa15.08■□□□□ 0.01
HDAC7-228ENST00000548938 CDK5RAP3Q96JB5 506 aa15.08■□□□□ 0.01
HDAC7-228ENST00000548938 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.08■□□□□ 0.01
HDAC7-228ENST00000548938 GOLPH3Q9H4A6 298 aa15.08■□□□□ 0.01
HDAC7-228ENST00000548938 PLCB1Q9NQ66 1216 aa15.08■□□□□ 0.01
HDAC7-228ENST00000548938 TMEM260Q9NX78 707 aa15.08■□□□□ 0.01
HDAC7-228ENST00000548938 STK17AQ9UEE5 414 aa15.08■□□□□ 0.01
HDAC7-228ENST00000548938 GOLGA6L10A6NI86 522 aa15.08■□□□□ 0
HDAC7-228ENST00000548938 RAPGEF1Q13905 1077 aa15.08■□□□□ 0
HDAC7-228ENST00000548938 SLC18A3Q16572 532 aa15.08■□□□□ 0
HDAC7-228ENST00000548938 PTPROQ16827 1216 aa15.08■□□□□ 0
HDAC7-228ENST00000548938 DDX42Q86XP3 938 aaKnown RBP eCLIP15.08■□□□□ 0
HDAC7-228ENST00000548938 PROCA1Q8NCQ7 364 aaPredicted RBP15.08■□□□□ 0
HDAC7-228ENST00000548938 DDX12PQ92771 950 aa15.08■□□□□ 0
HDAC7-228ENST00000548938 NLRP3Q96P20 1036 aa15.08■□□□□ 0
HDAC7-228ENST00000548938 TSG101Q99816 390 aa15.08■□□□□ 0
HDAC7-228ENST00000548938 NUDT12Q9BQG2 462 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms