RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	RBM10	P98175	930 aa	Known RBP	6.06	□□□□□ -1.44
RPAP3-205	ENST00000548211	GRIN1	Q05586	938 aa		6.06	□□□□□ -1.44
RPAP3-205	ENST00000548211	CHRNA2	Q15822	529 aa		6.06	□□□□□ -1.44
RPAP3-205	ENST00000548211	FXN	Q16595	210 aa		6.06	□□□□□ -1.44
RPAP3-205	ENST00000548211	SLC10A6	Q3KNW5	377 aa		6.06	□□□□□ -1.44
RPAP3-205	ENST00000548211	TNNI3K	Q59H18	835 aa		6.06	□□□□□ -1.44
RPAP3-205	ENST00000548211	PROSER1	Q86XN7	944 aa		6.06	□□□□□ -1.44
RPAP3-205	ENST00000548211	CLEC4D	Q8WXI8	215 aa		6.06	□□□□□ -1.44
RPAP3-205	ENST00000548211	DVL3	Q92997	716 aa	Predicted RBP	6.06	□□□□□ -1.44
RPAP3-205	ENST00000548211	EPB41L1	Q9H4G0	881 aa		6.06	□□□□□ -1.44
RPAP3-205	ENST00000548211	ZNF408	Q9H9D4	720 aa		6.06	□□□□□ -1.44
RPAP3-205	ENST00000548211	NPFFR2	Q9Y5X5	522 aa		6.06	□□□□□ -1.44
RPAP3-205	ENST00000548211		A0A1W2PQU0	124 aa		6.05	□□□□□ -1.44
RPAP3-205	ENST00000548211	SLC27A2	O14975	620 aa		6.05	□□□□□ -1.44
RPAP3-205	ENST00000548211	B4GALT4	O60513	344 aa		6.05	□□□□□ -1.44
RPAP3-205	ENST00000548211	ERCC5	P28715	1186 aa	Predicted RBP	6.05	□□□□□ -1.44
RPAP3-205	ENST00000548211	TRMT10B	Q6PF06	316 aa	Known RBP	6.05	□□□□□ -1.44
RPAP3-205	ENST00000548211	KBTBD2	Q8IY47	623 aa		6.05	□□□□□ -1.44
RPAP3-205	ENST00000548211	SLC16A11	Q8NCK7	471 aa		6.05	□□□□□ -1.44
RPAP3-205	ENST00000548211	PIP4K2C	Q8TBX8	421 aa		6.05	□□□□□ -1.44
RPAP3-205	ENST00000548211	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	6.05	□□□□□ -1.44
RPAP3-205	ENST00000548211	IER2	Q9BTL4	223 aa		6.05	□□□□□ -1.44
RPAP3-205	ENST00000548211	SMOC1	Q9H4F8	434 aa		6.05	□□□□□ -1.44
RPAP3-205	ENST00000548211	CD248	Q9HCU0	757 aa		6.05	□□□□□ -1.44
RPAP3-205	ENST00000548211	ST7	Q9NRC1	585 aa		6.05	□□□□□ -1.44
RPAP3-205	ENST00000548211	ASH2L	Q9UBL3	628 aa		6.05	□□□□□ -1.44
RPAP3-205	ENST00000548211	ZDHHC9	Q9Y397	364 aa		6.05	□□□□□ -1.44
RPAP3-205	ENST00000548211	NPEPPSL1	A6NEC2	478 aa		6.04	□□□□□ -1.44
RPAP3-205	ENST00000548211	DLX3	O60479	287 aa		6.04	□□□□□ -1.44
RPAP3-205	ENST00000548211	LTF	P02788	710 aa		6.04	□□□□□ -1.44
RPAP3-205	ENST00000548211	COL6A1	P12109	1028 aa		6.04	□□□□□ -1.44
RPAP3-205	ENST00000548211	PKN3	Q6P5Z2	889 aa		6.04	□□□□□ -1.44
RPAP3-205	ENST00000548211	VPS37D	Q86XT2	251 aa		6.04	□□□□□ -1.44
RPAP3-205	ENST00000548211	CELF2-AS1	Q8N7Q2	184 aa		6.04	□□□□□ -1.44
RPAP3-205	ENST00000548211	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	6.04	□□□□□ -1.44
RPAP3-205	ENST00000548211	SCAND2P	Q9GZW5	306 aa	Predicted RBP	6.04	□□□□□ -1.44
RPAP3-205	ENST00000548211	THOC2	Q8NI27	1593 aa	Known RBP	6.03	□□□□□ -1.44
RPAP3-205	ENST00000548211	PPP2CB	P62714	309 aa		6.03	□□□□□ -1.44
RPAP3-205	ENST00000548211	PPP2CA	P67775	309 aa		6.03	□□□□□ -1.44
RPAP3-205	ENST00000548211	ZNF585A	Q6P3V2	769 aa		6.03	□□□□□ -1.44
RPAP3-205	ENST00000548211		Q8N1X5	172 aa		6.03	□□□□□ -1.44
RPAP3-205	ENST00000548211	NUDT10	Q8NFP7	164 aa		6.03	□□□□□ -1.44
RPAP3-205	ENST00000548211	HNRNPLL	Q8WVV9	542 aa	Known RBP	6.03	□□□□□ -1.44
RPAP3-205	ENST00000548211	NUDT11	Q96G61	164 aa		6.03	□□□□□ -1.44
RPAP3-205	ENST00000548211	WWC2-AS2	Q96NR7	200 aa		6.03	□□□□□ -1.44
RPAP3-205	ENST00000548211	TMEM209	Q96SK2	561 aa		6.03	□□□□□ -1.44
RPAP3-205	ENST00000548211	SLC6A20	Q9NP91	592 aa		6.03	□□□□□ -1.44
RPAP3-205	ENST00000548211	SMARCA2	P51531	1590 aa		6.02	□□□□□ -1.45
RPAP3-205	ENST00000548211	FGR	P09769	529 aa		6.02	□□□□□ -1.45
RPAP3-205	ENST00000548211	COL6A2	P12110	1019 aa		6.02	□□□□□ -1.45
RPAP3-205	ENST00000548211	NFATC3	Q12968	1075 aa		6.02	□□□□□ -1.45
RPAP3-205	ENST00000548211	SURF1	Q15526	300 aa		6.02	□□□□□ -1.45
RPAP3-205	ENST00000548211	KCNT2	Q6UVM3	1135 aa		6.02	□□□□□ -1.45
RPAP3-205	ENST00000548211	ARHGEF18	Q6ZSZ5	1173 aa		6.02	□□□□□ -1.45
RPAP3-205	ENST00000548211	USP53	Q70EK8	1073 aa		6.02	□□□□□ -1.45
RPAP3-205	ENST00000548211	EEPD1	Q7L9B9	569 aa		6.02	□□□□□ -1.45
RPAP3-205	ENST00000548211	PALM2	Q8IXS6	379 aa		6.02	□□□□□ -1.45
RPAP3-205	ENST00000548211	DNER	Q8NFT8	737 aa		6.02	□□□□□ -1.45
RPAP3-205	ENST00000548211	PHOSPHO1	Q8TCT1	267 aa		6.02	□□□□□ -1.45
RPAP3-205	ENST00000548211	KCTD13	Q8WZ19	329 aa		6.02	□□□□□ -1.45
RPAP3-205	ENST00000548211	PHF20	Q9BVI0	1012 aa		6.02	□□□□□ -1.45
RPAP3-205	ENST00000548211	KLC2	Q9H0B6	622 aa		6.02	□□□□□ -1.45
RPAP3-205	ENST00000548211	JADE2	Q9NQC1	790 aa		6.02	□□□□□ -1.45
RPAP3-205	ENST00000548211	FTSJ1	Q9UET6	329 aa		6.02	□□□□□ -1.45
RPAP3-205	ENST00000548211	TELO2	Q9Y4R8	837 aa		6.02	□□□□□ -1.45
RPAP3-205	ENST00000548211	HMGXB3	Q12766	1538 aa		6.02	□□□□□ -1.45
RPAP3-205	ENST00000548211	LAMC3	Q9Y6N6	1575 aa		6.01	□□□□□ -1.45
RPAP3-205	ENST00000548211	KLHL18	O94889	574 aa		6.01	□□□□□ -1.45
RPAP3-205	ENST00000548211	EPHB4	P54760	987 aa		6.01	□□□□□ -1.45
RPAP3-205	ENST00000548211	MAP4K2	Q12851	820 aa		6.01	□□□□□ -1.45
RPAP3-205	ENST00000548211	PLEKHH3	Q7Z736	793 aa		6.01	□□□□□ -1.45
RPAP3-205	ENST00000548211	CIR1	Q86X95	450 aa	Predicted RBP	6.01	□□□□□ -1.45
RPAP3-205	ENST00000548211	MCF2L2	Q86YR7	1114 aa		6.01	□□□□□ -1.45
RPAP3-205	ENST00000548211	KISS1R	Q969F8	398 aa	Predicted RBP	6.01	□□□□□ -1.45
RPAP3-205	ENST00000548211	KCNJ15	Q99712	375 aa		6.01	□□□□□ -1.45
RPAP3-205	ENST00000548211	GPR27	Q9NS67	375 aa		6.01	□□□□□ -1.45
RPAP3-205	ENST00000548211	TSC22D4	Q9Y3Q8	395 aa		6.01	□□□□□ -1.45
RPAP3-205	ENST00000548211	NES	P48681	1621 aa		6	□□□□□ -1.45
RPAP3-205	ENST00000548211	BLACE	A4D250	179 aa		6	□□□□□ -1.45
RPAP3-205	ENST00000548211	KRIT1	O00522	736 aa		6	□□□□□ -1.45
RPAP3-205	ENST00000548211	NKRF	O15226	690 aa	Known RBP eCLIP	6	□□□□□ -1.45
RPAP3-205	ENST00000548211	CKM	P06732	381 aa		6	□□□□□ -1.45
RPAP3-205	ENST00000548211	C6	P13671	934 aa		6	□□□□□ -1.45
RPAP3-205	ENST00000548211	TUSC3	Q13454	348 aa		6	□□□□□ -1.45
RPAP3-205	ENST00000548211	NTRK3	Q16288	839 aa		6	□□□□□ -1.45
RPAP3-205	ENST00000548211	OTOP3	Q7RTS5	596 aa		6	□□□□□ -1.45
RPAP3-205	ENST00000548211	KLHL36	Q8N4N3	616 aa		6	□□□□□ -1.45
RPAP3-205	ENST00000548211	DTX3	Q8N9I9	347 aa		6	□□□□□ -1.45
RPAP3-205	ENST00000548211	MEGF9	Q9H1U4	602 aa		6	□□□□□ -1.45
RPAP3-205	ENST00000548211	HSPBP1	Q9NZL4	362 aa		6	□□□□□ -1.45
RPAP3-205	ENST00000548211	ATAD2B	Q9ULI0	1458 aa		6	□□□□□ -1.45
RPAP3-205	ENST00000548211	PDS5B	Q9NTI5	1447 aa		5.99	□□□□□ -1.45
RPAP3-205	ENST00000548211	CYP7B1	O75881	506 aa		5.99	□□□□□ -1.45
RPAP3-205	ENST00000548211	GLRB	P48167	497 aa		5.99	□□□□□ -1.45
RPAP3-205	ENST00000548211	VASN	Q6EMK4	673 aa		5.99	□□□□□ -1.45
RPAP3-205	ENST00000548211	TINF2	Q9BSI4	451 aa		5.99	□□□□□ -1.45
RPAP3-205	ENST00000548211	EPN3	Q9H201	632 aa		5.99	□□□□□ -1.45
RPAP3-205	ENST00000548211	DEF6	Q9H4E7	631 aa		5.99	□□□□□ -1.45
RPAP3-205	ENST00000548211	BARX1	Q9HBU1	254 aa	Predicted RBP	5.99	□□□□□ -1.45
RPAP3-205	ENST00000548211	ADAM29	Q9UKF5	820 aa		5.99	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms