RNA–Protein interactions for RNA: ENST00000548126.1

CCDC59-203, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 984 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-203ENST00000548126 PIDD1Q9HB75 910 aa8.55□□□□□ -1.04
CCDC59-203ENST00000548126 C1GALT1Q9NS00 363 aa8.55□□□□□ -1.04
CCDC59-203ENST00000548126 TCF20Q9UGU0 1960 aaKnown RBP8.54□□□□□ -1.04
CCDC59-203ENST00000548126 ABL1P00519 1130 aa8.54□□□□□ -1.04
CCDC59-203ENST00000548126 IL1R1P14778 569 aa8.54□□□□□ -1.04
CCDC59-203ENST00000548126 KCNJ4P48050 445 aa8.54□□□□□ -1.04
CCDC59-203ENST00000548126 CTSWP56202 376 aa8.54□□□□□ -1.04
CCDC59-203ENST00000548126 SPRED3Q2MJR0 410 aa8.54□□□□□ -1.04
CCDC59-203ENST00000548126 C9orf50Q5SZB4 431 aa8.54□□□□□ -1.04
CCDC59-203ENST00000548126 SEZ6L2Q6UXD5 910 aa8.54□□□□□ -1.04
CCDC59-203ENST00000548126 NETO1Q8TDF5 533 aa8.54□□□□□ -1.04
CCDC59-203ENST00000548126 P2RX7Q99572 595 aaKnown RBP8.54□□□□□ -1.04
CCDC59-203ENST00000548126 GREM2Q9H772 168 aa8.54□□□□□ -1.04
CCDC59-203ENST00000548126 THEGQ9P2T0 379 aa8.54□□□□□ -1.04
CCDC59-203ENST00000548126 DBF4Q9UBU7 674 aaPredicted RBP8.54□□□□□ -1.04
CCDC59-203ENST00000548126 CXCL11O14625 94 aa8.53□□□□□ -1.04
CCDC59-203ENST00000548126 CTSBP07858 339 aa8.53□□□□□ -1.04
CCDC59-203ENST00000548126 SLFN14P0C7P3 912 aa8.53□□□□□ -1.04
CCDC59-203ENST00000548126 ZEB1P37275 1124 aaPredicted RBP8.53□□□□□ -1.04
CCDC59-203ENST00000548126 IGHMBP2P38935 993 aaKnown RBP8.53□□□□□ -1.04
CCDC59-203ENST00000548126 KIAA0319Q5VV43 1072 aa8.53□□□□□ -1.04
CCDC59-203ENST00000548126 DCAF15Q66K64 600 aa8.53□□□□□ -1.04
CCDC59-203ENST00000548126 C15orf52Q6ZUT6 534 aaKnown RBP8.53□□□□□ -1.04
CCDC59-203ENST00000548126 TRIM56Q9BRZ2 755 aaKnown RBP8.53□□□□□ -1.04
CCDC59-203ENST00000548126 ZNF341Q9BYN7 854 aa8.53□□□□□ -1.04
CCDC59-203ENST00000548126 EHD4Q9H223 541 aa8.53□□□□□ -1.04
CCDC59-203ENST00000548126 ATXN3LQ9H3M9 355 aa8.53□□□□□ -1.04
CCDC59-203ENST00000548126 HYPKQ9NX55 129 aa8.53□□□□□ -1.04
CCDC59-203ENST00000548126 CWC25Q9NXE8 425 aaPredicted RBP8.53□□□□□ -1.04
CCDC59-203ENST00000548126 DBX1A6NMT0 343 aa8.52□□□□□ -1.05
CCDC59-203ENST00000548126 MRE11P49959 708 aa8.52□□□□□ -1.05
CCDC59-203ENST00000548126 KCNA1Q09470 495 aa8.52□□□□□ -1.05
CCDC59-203ENST00000548126 TMEM31Q5JXX7 168 aa8.52□□□□□ -1.05
CCDC59-203ENST00000548126 AKNAD1Q5T1N1 836 aa8.52□□□□□ -1.05
CCDC59-203ENST00000548126 ZNF574Q6ZN55 896 aaPredicted RBP8.52□□□□□ -1.05
CCDC59-203ENST00000548126 MIGA2Q7L4E1 593 aa8.52□□□□□ -1.05
CCDC59-203ENST00000548126 FASTKD5Q7L8L6 764 aaKnown RBP8.52□□□□□ -1.05
CCDC59-203ENST00000548126 PPM1EQ8WY54 764 aa8.52□□□□□ -1.05
CCDC59-203ENST00000548126 PLEKHF1Q96S99 279 aa8.52□□□□□ -1.05
CCDC59-203ENST00000548126 MYD88Q99836 296 aa8.52□□□□□ -1.05
CCDC59-203ENST00000548126 ZNF576Q9H609 170 aa8.52□□□□□ -1.05
CCDC59-203ENST00000548126 RC3H2Q9HBD1 1191 aaKnown RBP8.52□□□□□ -1.05
CCDC59-203ENST00000548126 GJD2Q9UKL4 321 aa8.52□□□□□ -1.05
CCDC59-203ENST00000548126 VAV3Q9UKW4 847 aa8.52□□□□□ -1.05
CCDC59-203ENST00000548126 TTF2Q9UNY4 1162 aaKnown RBP8.52□□□□□ -1.05
CCDC59-203ENST00000548126 JAG2Q9Y219 1238 aa8.52□□□□□ -1.05
CCDC59-203ENST00000548126 SLC45A1Q9Y2W3 748 aa8.52□□□□□ -1.05
CCDC59-203ENST00000548126 REV3LO60673 3130 aa8.51□□□□□ -1.05
CCDC59-203ENST00000548126 MYH3P11055 1940 aa8.51□□□□□ -1.05
CCDC59-203ENST00000548126 FUT4P22083 530 aa8.51□□□□□ -1.05
CCDC59-203ENST00000548126 CRKP46108 304 aa8.51□□□□□ -1.05
CCDC59-203ENST00000548126 KRT24Q2M2I5 525 aa8.51□□□□□ -1.05
CCDC59-203ENST00000548126 ZNF648Q5T619 568 aaPredicted RBP8.51□□□□□ -1.05
CCDC59-203ENST00000548126 MAP3K21Q5TCX8 1036 aa8.51□□□□□ -1.05
CCDC59-203ENST00000548126 ZNF804AQ7Z570 1209 aa8.51□□□□□ -1.05
CCDC59-203ENST00000548126 FAM83AQ86UY5 434 aa8.51□□□□□ -1.05
CCDC59-203ENST00000548126 KSR1Q8IVT5 923 aa8.51□□□□□ -1.05
CCDC59-203ENST00000548126 NECAB3Q96P71 396 aaPredicted RBP8.51□□□□□ -1.05
CCDC59-203ENST00000548126 MPHOSPH8Q99549 860 aa8.51□□□□□ -1.05
CCDC59-203ENST00000548126 SLC38A3Q99624 504 aa8.51□□□□□ -1.05
CCDC59-203ENST00000548126 WDR18Q9BV38 432 aa8.51□□□□□ -1.05
CCDC59-203ENST00000548126 EPHX3Q9H6B9 360 aa8.51□□□□□ -1.05
CCDC59-203ENST00000548126 ZNF112Q9UJU3 913 aa8.51□□□□□ -1.05
CCDC59-203ENST00000548126 BRPF3Q9ULD4 1205 aa8.51□□□□□ -1.05
CCDC59-203ENST00000548126 SNAP23O00161 211 aa8.5□□□□□ -1.05
CCDC59-203ENST00000548126 DYNC1LI2O43237 492 aaPredicted RBP8.5□□□□□ -1.05
CCDC59-203ENST00000548126 ITPKAP23677 461 aa8.5□□□□□ -1.05
CCDC59-203ENST00000548126 CACNB3P54284 484 aa8.5□□□□□ -1.05
CCDC59-203ENST00000548126 CHRNDQ07001 517 aa8.5□□□□□ -1.05
CCDC59-203ENST00000548126 RPS26P11Q5JNZ5 115 aaPredicted RBP8.5□□□□□ -1.05
CCDC59-203ENST00000548126 MFSD14BQ5SR56 506 aa8.5□□□□□ -1.05
CCDC59-203ENST00000548126 FKBP1CQ5VVH2 108 aa8.5□□□□□ -1.05
CCDC59-203ENST00000548126 SPRED2Q7Z698 418 aa8.5□□□□□ -1.05
CCDC59-203ENST00000548126 ANKRD13CQ8N6S4 541 aa8.5□□□□□ -1.05
CCDC59-203ENST00000548126 PI4K2BQ8TCG2 481 aa8.5□□□□□ -1.05
CCDC59-203ENST00000548126 SMCR8Q8TEV9 937 aaPredicted RBP8.5□□□□□ -1.05
CCDC59-203ENST00000548126 SENP6Q9GZR1 1112 aaPredicted RBP8.5□□□□□ -1.05
CCDC59-203ENST00000548126 MKNK2Q9HBH9 465 aa8.5□□□□□ -1.05
CCDC59-203ENST00000548126 WDFY4Q6ZS81 3184 aa8.5□□□□□ -1.05
CCDC59-203ENST00000548126 LTBP2Q14767 1821 aa8.5□□□□□ -1.05
CCDC59-203ENST00000548126 AK9Q5TCS8 1911 aa8.49□□□□□ -1.05
CCDC59-203ENST00000548126 A0A0G2JLL6 359 aaPredicted RBP8.49□□□□□ -1.05
CCDC59-203ENST00000548126 HOXB7P09629 217 aa8.49□□□□□ -1.05
CCDC59-203ENST00000548126 FAM87AP0C7U9 286 aa8.49□□□□□ -1.05
CCDC59-203ENST00000548126 PRKCQQ04759 706 aa8.49□□□□□ -1.05
CCDC59-203ENST00000548126 NOL9Q5SY16 702 aaKnown RBP8.49□□□□□ -1.05
CCDC59-203ENST00000548126 PRRT2Q7Z6L0 340 aaPredicted RBP8.49□□□□□ -1.05
CCDC59-203ENST00000548126 TMEM40Q8WWA1 233 aa8.49□□□□□ -1.05
CCDC59-203ENST00000548126 TRIB2Q92519 343 aa8.49□□□□□ -1.05
CCDC59-203ENST00000548126 FAM168AQ92567 244 aa8.49□□□□□ -1.05
CCDC59-203ENST00000548126 TAF5LO75529 589 aa8.48□□□□□ -1.05
CCDC59-203ENST00000548126 ECEL1O95672 775 aa8.48□□□□□ -1.05
CCDC59-203ENST00000548126 RTP1P59025 263 aa8.48□□□□□ -1.05
CCDC59-203ENST00000548126 HDLBPQ00341 1268 aaKnown RBP8.48□□□□□ -1.05
CCDC59-203ENST00000548126 ID3Q02535 119 aa8.48□□□□□ -1.05
CCDC59-203ENST00000548126 BNIP3Q12983 259 aa8.48□□□□□ -1.05
CCDC59-203ENST00000548126 IFI16Q16666 785 aaKnown RBP8.48□□□□□ -1.05
CCDC59-203ENST00000548126 FAM110CQ1W6H9 321 aa8.48□□□□□ -1.05
CCDC59-203ENST00000548126 GADL1Q6ZQY3 521 aa8.48□□□□□ -1.05
CCDC59-203ENST00000548126 BADQ92934 168 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms