RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 CTDNEP1O95476 244 aa13.49□□□□□ -0.25
RAB5C-204ENST00000547517 LGALS2P05162 132 aa13.49□□□□□ -0.25
RAB5C-204ENST00000547517 ZNF76P36508 570 aa13.49□□□□□ -0.25
RAB5C-204ENST00000547517 RBM25P49756 843 aaKnown RBP13.49□□□□□ -0.25
RAB5C-204ENST00000547517 PSEN2P49810 448 aa13.49□□□□□ -0.25
RAB5C-204ENST00000547517 MFSD10Q14728 455 aa13.49□□□□□ -0.25
RAB5C-204ENST00000547517 CEP55Q53EZ4 464 aa13.49□□□□□ -0.25
RAB5C-204ENST00000547517 MCTP2Q6DN12 878 aa13.49□□□□□ -0.25
RAB5C-204ENST00000547517 TDHQ8IZJ6 230 aa13.49□□□□□ -0.25
RAB5C-204ENST00000547517 GIMAP8Q8ND71 665 aaPredicted RBP13.49□□□□□ -0.25
RAB5C-204ENST00000547517 CYP2W1Q8TAV3 490 aa13.49□□□□□ -0.25
RAB5C-204ENST00000547517 KIF2CQ99661 725 aa13.49□□□□□ -0.25
RAB5C-204ENST00000547517 GPR20Q99678 358 aa13.49□□□□□ -0.25
RAB5C-204ENST00000547517 SENP7Q9BQF6 1050 aa13.49□□□□□ -0.25
RAB5C-204ENST00000547517 ALG1Q9BT22 464 aa13.49□□□□□ -0.25
RAB5C-204ENST00000547517 HIPK3Q9H422 1215 aa13.49□□□□□ -0.25
RAB5C-204ENST00000547517 PCDHA4Q9UN74 947 aa13.49□□□□□ -0.25
RAB5C-204ENST00000547517 GTF3C3Q9Y5Q9 886 aa13.49□□□□□ -0.25
RAB5C-204ENST00000547517 TRIOBPQ9H2D6 2365 aa13.49□□□□□ -0.25
RAB5C-204ENST00000547517 UMODL1Q5DID0 1318 aa13.48□□□□□ -0.25
RAB5C-204ENST00000547517 A0A1W2PPC1 479 aa13.48□□□□□ -0.25
RAB5C-204ENST00000547517 PPFIA4O75335 1185 aa13.48□□□□□ -0.25
RAB5C-204ENST00000547517 TIMP1P01033 207 aa13.48□□□□□ -0.25
RAB5C-204ENST00000547517 CYP2C9P11712 490 aa13.48□□□□□ -0.25
RAB5C-204ENST00000547517 FPGSQ05932 587 aa13.48□□□□□ -0.25
RAB5C-204ENST00000547517 KIAA0753Q2KHM9 967 aa13.48□□□□□ -0.25
RAB5C-204ENST00000547517 TRIM50Q86XT4 487 aa13.48□□□□□ -0.25
RAB5C-204ENST00000547517 C7orf31Q8N865 590 aa13.48□□□□□ -0.25
RAB5C-204ENST00000547517 KCNH7Q9NS40 1196 aa13.48□□□□□ -0.25
RAB5C-204ENST00000547517 ORC3Q9UBD5 711 aaPredicted RBP13.48□□□□□ -0.25
RAB5C-204ENST00000547517 KCNJ14Q9UNX9 436 aa13.48□□□□□ -0.25
RAB5C-204ENST00000547517 NOD1Q9Y239 953 aa13.48□□□□□ -0.25
RAB5C-204ENST00000547517 FAM86B1E9PN63 330 aa13.47□□□□□ -0.25
RAB5C-204ENST00000547517 FAM86B2P0C5J1 330 aa13.47□□□□□ -0.25
RAB5C-204ENST00000547517 SUPT20HL2P0C7V6 817 aa13.47□□□□□ -0.25
RAB5C-204ENST00000547517 ARP10275 920 aa13.47□□□□□ -0.25
RAB5C-204ENST00000547517 CYP2C18P33260 490 aa13.47□□□□□ -0.25
RAB5C-204ENST00000547517 PTPN11Q06124 597 aaPredicted RBP13.47□□□□□ -0.25
RAB5C-204ENST00000547517 ST3GAL1Q11201 340 aa13.47□□□□□ -0.25
RAB5C-204ENST00000547517 UTP14CQ5TAP6 766 aaKnown RBP13.47□□□□□ -0.25
RAB5C-204ENST00000547517 GDF6Q6KF10 455 aaPredicted RBP13.47□□□□□ -0.25
RAB5C-204ENST00000547517 SESTD1Q86VW0 696 aa13.47□□□□□ -0.25
RAB5C-204ENST00000547517 BLIDQ8IZY5 108 aa13.47□□□□□ -0.25
RAB5C-204ENST00000547517 CRYGNQ8WXF5 182 aa13.47□□□□□ -0.25
RAB5C-204ENST00000547517 SDF4Q9BRK5 362 aa13.47□□□□□ -0.25
RAB5C-204ENST00000547517 C16orf70Q9BSU1 422 aa13.47□□□□□ -0.25
RAB5C-204ENST00000547517 NOC4LQ9BVI4 516 aaKnown RBP13.47□□□□□ -0.25
RAB5C-204ENST00000547517 AGO4Q9HCK5 861 aaKnown RBP13.47□□□□□ -0.25
RAB5C-204ENST00000547517 JPH1Q9HDC5 661 aaPredicted RBP13.47□□□□□ -0.25
RAB5C-204ENST00000547517 LIMCH1Q9UPQ0 1083 aa13.47□□□□□ -0.25
RAB5C-204ENST00000547517 LAMA3Q16787 3333 aa13.47□□□□□ -0.25
RAB5C-204ENST00000547517 HAS3O00219 553 aa13.46□□□□□ -0.25
RAB5C-204ENST00000547517 MAFGO15525 162 aa13.46□□□□□ -0.25
RAB5C-204ENST00000547517 JAK2O60674 1132 aa13.46□□□□□ -0.25
RAB5C-204ENST00000547517 CYP3A4P08684 503 aa13.46□□□□□ -0.25
RAB5C-204ENST00000547517 XBP1P17861 261 aa13.46□□□□□ -0.25
RAB5C-204ENST00000547517 TCF7P36402 384 aaPredicted RBP13.46□□□□□ -0.25
RAB5C-204ENST00000547517 FXR1P51114 621 aaKnown RBP eCLIP13.46□□□□□ -0.25
RAB5C-204ENST00000547517 FOSBP53539 338 aa13.46□□□□□ -0.25
RAB5C-204ENST00000547517 EPHB4P54760 987 aa13.46□□□□□ -0.25
RAB5C-204ENST00000547517 SETQ01105 290 aaPredicted RBP13.46□□□□□ -0.25
RAB5C-204ENST00000547517 ITGB3BPQ13352 177 aaPredicted RBP13.46□□□□□ -0.25
RAB5C-204ENST00000547517 NPY5RQ15761 445 aa13.46□□□□□ -0.25
RAB5C-204ENST00000547517 PTGISQ16647 500 aa13.46□□□□□ -0.25
RAB5C-204ENST00000547517 C9orf50Q5SZB4 431 aa13.46□□□□□ -0.25
RAB5C-204ENST00000547517 MFSD5Q6N075 450 aa13.46□□□□□ -0.25
RAB5C-204ENST00000547517 NIPA1Q7RTP0 329 aa13.46□□□□□ -0.25
RAB5C-204ENST00000547517 PLA2G4DQ86XP0 818 aa13.46□□□□□ -0.25
RAB5C-204ENST00000547517 CCDC83Q8IWF9 413 aa13.46□□□□□ -0.25
RAB5C-204ENST00000547517 TMEM199Q8N511 208 aa13.46□□□□□ -0.25
RAB5C-204ENST00000547517 DAGLBQ8NCG7 672 aa13.46□□□□□ -0.25
RAB5C-204ENST00000547517 NSUN7Q8NE18 718 aaKnown RBP13.46□□□□□ -0.25
RAB5C-204ENST00000547517 WASF1Q92558 559 aa13.46□□□□□ -0.25
RAB5C-204ENST00000547517 UIMC1Q96RL1 719 aa13.46□□□□□ -0.25
RAB5C-204ENST00000547517 WNT8AQ9H1J5 351 aa13.46□□□□□ -0.25
RAB5C-204ENST00000547517 GJB4Q9NTQ9 266 aa13.46□□□□□ -0.25
RAB5C-204ENST00000547517 HDAC6Q9UBN7 1215 aa13.46□□□□□ -0.25
RAB5C-204ENST00000547517 GTF2IRD1Q9UHL9 959 aa13.46□□□□□ -0.25
RAB5C-204ENST00000547517 ZNF215Q9UL58 517 aaPredicted RBP13.46□□□□□ -0.25
RAB5C-204ENST00000547517 IGLV3-22A0A075B6J6 115 aa13.45□□□□□ -0.26
RAB5C-204ENST00000547517 H3BRB1 525 aa13.45□□□□□ -0.26
RAB5C-204ENST00000547517 DDX39AO00148 427 aaKnown RBP13.45□□□□□ -0.26
RAB5C-204ENST00000547517 MEIS1O00470 390 aa13.45□□□□□ -0.26
RAB5C-204ENST00000547517 FDPSP14324 419 aaKnown RBP13.45□□□□□ -0.26
RAB5C-204ENST00000547517 CSF2RAP15509 400 aa13.45□□□□□ -0.26
RAB5C-204ENST00000547517 CCL23P55773 120 aa13.45□□□□□ -0.26
RAB5C-204ENST00000547517 PPIGQ13427 754 aaKnown RBP eCLIP13.45□□□□□ -0.266e-7■□□□□ 9
RAB5C-204ENST00000547517 RABEP1Q15276 862 aa13.45□□□□□ -0.26
RAB5C-204ENST00000547517 SHHQ15465 462 aa13.45□□□□□ -0.26
RAB5C-204ENST00000547517 PRR16Q569H4 304 aa13.45□□□□□ -0.26
RAB5C-204ENST00000547517 GALNT17Q6IS24 598 aa13.45□□□□□ -0.26
RAB5C-204ENST00000547517 FAM177A1Q8N128 213 aaPredicted RBP13.45□□□□□ -0.26
RAB5C-204ENST00000547517 TBCKQ8TEA7 893 aa13.45□□□□□ -0.26
RAB5C-204ENST00000547517 PHF20Q9BVI0 1012 aa13.45□□□□□ -0.26
RAB5C-204ENST00000547517 TUT1Q9H6E5 874 aaKnown RBP13.45□□□□□ -0.26
RAB5C-204ENST00000547517 SLC9A2Q9UBY0 812 aa13.45□□□□□ -0.26
RAB5C-204ENST00000547517 TANC1Q9C0D5 1861 aa13.44□□□□□ -0.26
RAB5C-204ENST00000547517 NFASCO94856 1347 aa13.44□□□□□ -0.26
RAB5C-204ENST00000547517 GSTTP1A0A1W2PQM5 241 aa13.44□□□□□ -0.26
RAB5C-204ENST00000547517 M0R2N6 131 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms