RNA–Protein interactions for RNA: ENST00000547476.5

TUBA1B-203, Transcript of tubulin alpha 1b, humanhuman

TSL 4

Gene TUBA1B, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-203ENST00000547476 USP15Q9Y4E8 981 aaPredicted RBP13.67□□□□□ -0.22
TUBA1B-203ENST00000547476 GALR2O43603 387 aaPredicted RBP13.66□□□□□ -0.22
TUBA1B-203ENST00000547476 SMARCA5O60264 1052 aaPredicted RBP13.66□□□□□ -0.22
TUBA1B-203ENST00000547476 TOP1P11387 765 aaKnown RBP13.66□□□□□ -0.22
TUBA1B-203ENST00000547476 NUBP1P53384 320 aa13.66□□□□□ -0.22
TUBA1B-203ENST00000547476 COASYQ13057 564 aa13.66□□□□□ -0.22
TUBA1B-203ENST00000547476 BTG3Q14201 252 aaPredicted RBP13.66□□□□□ -0.22
TUBA1B-203ENST00000547476 ARHGEF16Q5VV41 709 aa13.66□□□□□ -0.22
TUBA1B-203ENST00000547476 RGS22Q8NE09 1264 aa13.66□□□□□ -0.22
TUBA1B-203ENST00000547476 CLP1Q92989 425 aaKnown RBP13.66□□□□□ -0.22
TUBA1B-203ENST00000547476 IWS1Q96ST2 819 aa13.66□□□□□ -0.22
TUBA1B-203ENST00000547476 RMDN3Q96TC7 470 aa13.66□□□□□ -0.22
TUBA1B-203ENST00000547476 TMEM47Q9BQJ4 181 aa13.66□□□□□ -0.22
TUBA1B-203ENST00000547476 PHF7Q9BWX1 381 aaPredicted RBP13.66□□□□□ -0.22
TUBA1B-203ENST00000547476 TOMM22Q9NS69 142 aa13.66□□□□□ -0.22
TUBA1B-203ENST00000547476 BARX2Q9UMQ3 279 aaPredicted RBP13.66□□□□□ -0.22
TUBA1B-203ENST00000547476 RIF1Q5UIP0 2472 aaKnown RBP13.66□□□□□ -0.22
TUBA1B-203ENST00000547476 FAM186AA6NE01 2351 aa13.65□□□□□ -0.22
TUBA1B-203ENST00000547476 TREHO43280 583 aa13.65□□□□□ -0.22
TUBA1B-203ENST00000547476 CAND2O75155 1236 aa13.65□□□□□ -0.22
TUBA1B-203ENST00000547476 PPFIA4O75335 1185 aa13.65□□□□□ -0.22
TUBA1B-203ENST00000547476 PDHBP11177 359 aa13.65□□□□□ -0.22
TUBA1B-203ENST00000547476 EIF2AK2P19525 551 aaKnown RBP13.65□□□□□ -0.22
TUBA1B-203ENST00000547476 ICAM3P32942 547 aa13.65□□□□□ -0.22
TUBA1B-203ENST00000547476 NOVP48745 357 aa13.65□□□□□ -0.22
TUBA1B-203ENST00000547476 PTPN21Q16825 1174 aa13.65□□□□□ -0.22
TUBA1B-203ENST00000547476 TSHZ3Q63HK5 1081 aa13.65□□□□□ -0.22
TUBA1B-203ENST00000547476 ADGRD2Q7Z7M1 963 aa13.65□□□□□ -0.22
TUBA1B-203ENST00000547476 ZBTB33Q86T24 672 aa13.65□□□□□ -0.22
TUBA1B-203ENST00000547476 EFHBQ8N7U6 833 aa13.65□□□□□ -0.22
TUBA1B-203ENST00000547476 SYTL5Q8TDW5 730 aaPredicted RBP13.65□□□□□ -0.22
TUBA1B-203ENST00000547476 TBC1D5Q92609 795 aa13.65□□□□□ -0.22
TUBA1B-203ENST00000547476 GPATCH3Q96I76 525 aa13.65□□□□□ -0.22
TUBA1B-203ENST00000547476 SPATA33Q96N06 139 aa13.65□□□□□ -0.22
TUBA1B-203ENST00000547476 PLVAPQ9BX97 442 aa13.65□□□□□ -0.22
TUBA1B-203ENST00000547476 COL20A1Q9P218 1284 aa13.65□□□□□ -0.22
TUBA1B-203ENST00000547476 EIF3JO75822 258 aaKnown RBP13.64□□□□□ -0.23
TUBA1B-203ENST00000547476 PDGFBP01127 241 aaPredicted RBP13.64□□□□□ -0.23
TUBA1B-203ENST00000547476 SMIM10L2AP0DMW4 78 aa13.64□□□□□ -0.23
TUBA1B-203ENST00000547476 SMIM10L2BP0DMW5 78 aa13.64□□□□□ -0.23
TUBA1B-203ENST00000547476 HOXD8P13378 290 aaPredicted RBP13.64□□□□□ -0.23
TUBA1B-203ENST00000547476 NBL1P41271 181 aa13.64□□□□□ -0.23
TUBA1B-203ENST00000547476 NRIP1P48552 1158 aa13.64□□□□□ -0.23
TUBA1B-203ENST00000547476 ZNF543Q08ER8 600 aa13.64□□□□□ -0.23
TUBA1B-203ENST00000547476 CAMK1Q14012 370 aa13.64□□□□□ -0.23
TUBA1B-203ENST00000547476 HSDL1Q3SXM5 330 aa13.64□□□□□ -0.23
TUBA1B-203ENST00000547476 RBM23Q86U06 439 aaKnown RBP13.64□□□□□ -0.23
TUBA1B-203ENST00000547476 RIPOR3Q96MK2 946 aa13.64□□□□□ -0.23
TUBA1B-203ENST00000547476 PLAGL2Q9UPG8 496 aa13.64□□□□□ -0.23
TUBA1B-203ENST00000547476 VPS13AQ96RL7 3174 aa13.64□□□□□ -0.23
TUBA1B-203ENST00000547476 ABCB11O95342 1321 aa13.64□□□□□ -0.23
TUBA1B-203ENST00000547476 KIAA1671Q9BY89 1806 aa13.63□□□□□ -0.23
TUBA1B-203ENST00000547476 RRP12Q5JTH9 1297 aaKnown RBP13.63□□□□□ -0.23
TUBA1B-203ENST00000547476 MYSM1Q5VVJ2 828 aa13.63□□□□□ -0.23
TUBA1B-203ENST00000547476 MCF2L2Q86YR7 1114 aa13.63□□□□□ -0.23
TUBA1B-203ENST00000547476 P2RX5Q93086 422 aa13.63□□□□□ -0.23
TUBA1B-203ENST00000547476 NKD2Q969F2 451 aaPredicted RBP13.63□□□□□ -0.23
TUBA1B-203ENST00000547476 C16orf70Q9BSU1 422 aa13.63□□□□□ -0.23
TUBA1B-203ENST00000547476 RNPEPQ9H4A4 650 aa13.63□□□□□ -0.23
TUBA1B-203ENST00000547476 RC3H2Q9HBD1 1191 aaKnown RBP13.63□□□□□ -0.23
TUBA1B-203ENST00000547476 H3BRB1 525 aa13.62□□□□□ -0.23
TUBA1B-203ENST00000547476 GGPS1O95749 300 aa13.62□□□□□ -0.23
TUBA1B-203ENST00000547476 GLP2RO95838 553 aa13.62□□□□□ -0.23
TUBA1B-203ENST00000547476 NR3C2P08235 984 aa13.62□□□□□ -0.23
TUBA1B-203ENST00000547476 ATF7P17544 494 aaPredicted RBP13.62□□□□□ -0.23
TUBA1B-203ENST00000547476 DNAJB1P25685 340 aa13.62□□□□□ -0.23
TUBA1B-203ENST00000547476 HOXC8P31273 242 aa13.62□□□□□ -0.23
TUBA1B-203ENST00000547476 CDC37Q16543 378 aaPredicted RBP13.62□□□□□ -0.23
TUBA1B-203ENST00000547476 CELF3Q5SZQ8 465 aaKnown RBP13.62□□□□□ -0.23
TUBA1B-203ENST00000547476 ADSSL1Q8N142 457 aa13.62□□□□□ -0.23
TUBA1B-203ENST00000547476 MAF1Q9H063 256 aa13.62□□□□□ -0.23
TUBA1B-203ENST00000547476 TUT1Q9H6E5 874 aaKnown RBP13.62□□□□□ -0.23
TUBA1B-203ENST00000547476 CCDC171Q6TFL3 1326 aa13.62□□□□□ -0.23
TUBA1B-203ENST00000547476 ORC4O43929 436 aa13.61□□□□□ -0.23
TUBA1B-203ENST00000547476 ITGB1P05556 798 aa13.61□□□□□ -0.23
TUBA1B-203ENST00000547476 GOLGA8HP0CJ92 632 aa13.61□□□□□ -0.23
TUBA1B-203ENST00000547476 GHRP10912 638 aa13.61□□□□□ -0.23
TUBA1B-203ENST00000547476 GNAT1P11488 350 aa13.61□□□□□ -0.23
TUBA1B-203ENST00000547476 MCTP2Q6DN12 878 aa13.61□□□□□ -0.23
TUBA1B-203ENST00000547476 KCNV1Q6PIU1 500 aa13.61□□□□□ -0.23
TUBA1B-203ENST00000547476 FRMD5Q7Z6J6 570 aa13.61□□□□□ -0.23
TUBA1B-203ENST00000547476 SPPL3Q8TCT6 385 aa13.61□□□□□ -0.23
TUBA1B-203ENST00000547476 POF1BQ8WVV4 589 aa13.61□□□□□ -0.23
TUBA1B-203ENST00000547476 ZNF689Q96CS4 500 aaPredicted RBP13.61□□□□□ -0.23
TUBA1B-203ENST00000547476 CPVLQ9H3G5 476 aa13.61□□□□□ -0.23
TUBA1B-203ENST00000547476 MLXIPQ9HAP2 919 aa13.61□□□□□ -0.23
TUBA1B-203ENST00000547476 PXMP2Q9NR77 195 aa13.61□□□□□ -0.23
TUBA1B-203ENST00000547476 ZBTB40Q9NUA8 1239 aa13.61□□□□□ -0.23
TUBA1B-203ENST00000547476 ANAPC4Q9UJX5 808 aa13.61□□□□□ -0.23
TUBA1B-203ENST00000547476 DDX19BQ9UMR2 479 aa13.61□□□□□ -0.23
TUBA1B-203ENST00000547476 DNAH14Q0VDD8 3507 aa13.61□□□□□ -0.23
TUBA1B-203ENST00000547476 MYH6P13533 1939 aa13.6□□□□□ -0.23
TUBA1B-203ENST00000547476 RGS20O76081 388 aa13.6□□□□□ -0.23
TUBA1B-203ENST00000547476 LGALS2P05162 132 aa13.6□□□□□ -0.23
TUBA1B-203ENST00000547476 SNHG28P0DPA3 235 aa13.6□□□□□ -0.23
TUBA1B-203ENST00000547476 MYCLP12524 364 aaPredicted RBP13.6□□□□□ -0.23
TUBA1B-203ENST00000547476 UBA1P22314 1058 aaKnown RBP13.6□□□□□ -0.23
TUBA1B-203ENST00000547476 SP100P23497 879 aaPredicted RBP13.6□□□□□ -0.23
TUBA1B-203ENST00000547476 NAALADL2Q58DX5 795 aa13.6□□□□□ -0.23
TUBA1B-203ENST00000547476 GPATCH4Q5T3I0 446 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms