RNA–Protein interactions for RNA: ENST00000547102.5

LINC00661-202, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 619 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-202ENST00000547102 USP26Q9BXU7 913 aa12.26□□□□□ -0.45
LINC00661-202ENST00000547102 PBX4Q9BYU1 374 aa12.26□□□□□ -0.45
LINC00661-202ENST00000547102 ZNF576Q9H609 170 aa12.26□□□□□ -0.45
LINC00661-202ENST00000547102 RIC8AQ9NPQ8 531 aa12.26□□□□□ -0.45
LINC00661-202ENST00000547102 PCDHA6Q9UN73 950 aa12.26□□□□□ -0.45
LINC00661-202ENST00000547102 PCDHA8Q9Y5H6 950 aa12.26□□□□□ -0.45
LINC00661-202ENST00000547102 DOCK5Q9H7D0 1870 aa12.25□□□□□ -0.45
LINC00661-202ENST00000547102 TRIP12Q14669 1992 aaPredicted RBP12.25□□□□□ -0.45
LINC00661-202ENST00000547102 C17orf102A2RUQ5 167 aa12.25□□□□□ -0.45
LINC00661-202ENST00000547102 H3BRB1 525 aa12.25□□□□□ -0.45
LINC00661-202ENST00000547102 FOSP01100 380 aaPredicted RBP12.25□□□□□ -0.45
LINC00661-202ENST00000547102 ATP2A2P16615 1042 aaKnown RBP12.25□□□□□ -0.45
LINC00661-202ENST00000547102 PBX2P40425 430 aa12.25□□□□□ -0.45
LINC00661-202ENST00000547102 AKAP17AQ02040 695 aaKnown RBP12.25□□□□□ -0.45
LINC00661-202ENST00000547102 FUT2Q10981 343 aa12.25□□□□□ -0.45
LINC00661-202ENST00000547102 SEMA3FQ13275 785 aa12.25□□□□□ -0.45
LINC00661-202ENST00000547102 AP3B2Q13367 1082 aa12.25□□□□□ -0.45
LINC00661-202ENST00000547102 ERICH6BQ5W0A0 696 aa12.25□□□□□ -0.45
LINC00661-202ENST00000547102 CCDC12Q8WUD4 166 aaPredicted RBP12.25□□□□□ -0.45
LINC00661-202ENST00000547102 MYLIPQ8WY64 445 aa12.25□□□□□ -0.45
LINC00661-202ENST00000547102 GPR20Q99678 358 aa12.25□□□□□ -0.45
LINC00661-202ENST00000547102 C16orf70Q9BSU1 422 aa12.25□□□□□ -0.45
LINC00661-202ENST00000547102 TUT1Q9H6E5 874 aaKnown RBP12.25□□□□□ -0.45
LINC00661-202ENST00000547102 PPP4R2Q9NY27 417 aa12.25□□□□□ -0.45
LINC00661-202ENST00000547102 BARHL2Q9NY43 387 aa12.25□□□□□ -0.45
LINC00661-202ENST00000547102 SMCO2A6NFE2 343 aa12.24□□□□□ -0.45
LINC00661-202ENST00000547102 STXBP3O00186 592 aa12.24□□□□□ -0.45
LINC00661-202ENST00000547102 MAFGO15525 162 aa12.24□□□□□ -0.45
LINC00661-202ENST00000547102 BAIAP3O94812 1187 aa12.24□□□□□ -0.45
LINC00661-202ENST00000547102 CENPBP07199 599 aaPredicted RBP12.24□□□□□ -0.45
LINC00661-202ENST00000547102 SMIM10L2AP0DMW4 78 aa12.24□□□□□ -0.45
LINC00661-202ENST00000547102 SMIM10L2BP0DMW5 78 aa12.24□□□□□ -0.45
LINC00661-202ENST00000547102 GNAT1P11488 350 aa12.24□□□□□ -0.45
LINC00661-202ENST00000547102 CKBP12277 381 aa12.24□□□□□ -0.45
LINC00661-202ENST00000547102 SCG2P13521 617 aa12.24□□□□□ -0.45
LINC00661-202ENST00000547102 CDC27P30260 824 aa12.24□□□□□ -0.45
LINC00661-202ENST00000547102 KCNJ6P48051 423 aa12.24□□□□□ -0.45
LINC00661-202ENST00000547102 RBL2Q08999 1139 aa12.24□□□□□ -0.45
LINC00661-202ENST00000547102 NID2Q14112 1375 aa12.24□□□□□ -0.45
LINC00661-202ENST00000547102 UTP14CQ5TAP6 766 aaKnown RBP12.24□□□□□ -0.45
LINC00661-202ENST00000547102 MAFAQ8NHW3 353 aaPredicted RBP12.24□□□□□ -0.45
LINC00661-202ENST00000547102 DHX38Q92620 1227 aaKnown RBP12.24□□□□□ -0.45
LINC00661-202ENST00000547102 ATP6V0A1Q93050 837 aa12.24□□□□□ -0.45
LINC00661-202ENST00000547102 CTAGE1Q96RT6 745 aa12.24□□□□□ -0.45
LINC00661-202ENST00000547102 SLC9A7Q96T83 725 aa12.24□□□□□ -0.45
LINC00661-202ENST00000547102 ANO3Q9BYT9 981 aa12.24□□□□□ -0.45
LINC00661-202ENST00000547102 SLC28A3Q9HAS3 691 aa12.24□□□□□ -0.45
LINC00661-202ENST00000547102 JADE2Q9NQC1 790 aa12.24□□□□□ -0.45
LINC00661-202ENST00000547102 FAM217BQ9NTX9 383 aaPredicted RBP12.24□□□□□ -0.45
LINC00661-202ENST00000547102 PKD2L1Q9P0L9 805 aa12.24□□□□□ -0.45
LINC00661-202ENST00000547102 UBIAD1Q9Y5Z9 338 aa12.24□□□□□ -0.45
LINC00661-202ENST00000547102 GBF1Q92538 1859 aa12.23□□□□□ -0.45
LINC00661-202ENST00000547102 EMSYQ7Z589 1322 aa12.23□□□□□ -0.45
LINC00661-202ENST00000547102 KCNA2P16389 499 aa12.23□□□□□ -0.45
LINC00661-202ENST00000547102 ITGB5P18084 799 aa12.23□□□□□ -0.45
LINC00661-202ENST00000547102 ADD1P35611 737 aaKnown RBP12.23□□□□□ -0.45
LINC00661-202ENST00000547102 ZNF200P98182 395 aaPredicted RBP12.23□□□□□ -0.45
LINC00661-202ENST00000547102 PFKFB3Q16875 520 aaPredicted RBP12.23□□□□□ -0.45
LINC00661-202ENST00000547102 TYW1BQ6NUM6 668 aa12.23□□□□□ -0.45
LINC00661-202ENST00000547102 TRIM50Q86XT4 487 aa12.23□□□□□ -0.45
LINC00661-202ENST00000547102 FBXL16Q8N461 479 aa12.23□□□□□ -0.45
LINC00661-202ENST00000547102 GAS2L1Q99501 681 aaPredicted RBP12.23□□□□□ -0.45
LINC00661-202ENST00000547102 NKX2-4Q9H2Z4 354 aa12.23□□□□□ -0.45
LINC00661-202ENST00000547102 BCAS3Q9H6U6 928 aa12.23□□□□□ -0.45
LINC00661-202ENST00000547102 PCDHA11Q9Y5I1 949 aa12.23□□□□□ -0.45
LINC00661-202ENST00000547102 CYP46A1Q9Y6A2 500 aa12.23□□□□□ -0.45
LINC00661-202ENST00000547102 LAMA2P24043 3122 aaKnown RBP12.23□□□□□ -0.45
LINC00661-202ENST00000547102 TCF7P36402 384 aaPredicted RBP12.22□□□□□ -0.45
LINC00661-202ENST00000547102 ZNF76P36508 570 aa12.22□□□□□ -0.45
LINC00661-202ENST00000547102 THPOP40225 353 aa12.22□□□□□ -0.45
LINC00661-202ENST00000547102 RABGGTBP53611 331 aa12.22□□□□□ -0.45
LINC00661-202ENST00000547102 GRIN2CQ14957 1233 aa12.22□□□□□ -0.45
LINC00661-202ENST00000547102 PPP2R2DQ66LE6 453 aa12.22□□□□□ -0.45
LINC00661-202ENST00000547102 CNKSR3Q6P9H4 555 aa12.22□□□□□ -0.45
LINC00661-202ENST00000547102 RUFY3Q7L099 469 aa12.22□□□□□ -0.45
LINC00661-202ENST00000547102 SERINC5Q86VE9 423 aa12.22□□□□□ -0.45
LINC00661-202ENST00000547102 CCDC148Q8NFR7 591 aa12.22□□□□□ -0.45
LINC00661-202ENST00000547102 PHOSPHO2Q8TCD6 241 aa12.22□□□□□ -0.45
LINC00661-202ENST00000547102 SEPT1Q8WYJ6 367 aa12.22□□□□□ -0.45
LINC00661-202ENST00000547102 GLG1Q92896 1179 aa12.22□□□□□ -0.45
LINC00661-202ENST00000547102 VWCEQ96DN2 955 aa12.22□□□□□ -0.45
LINC00661-202ENST00000547102 PGBD1Q96JS3 809 aa12.22□□□□□ -0.45
LINC00661-202ENST00000547102 MXRA8Q9BRK3 442 aa12.22□□□□□ -0.45
LINC00661-202ENST00000547102 SDF4Q9BRK5 362 aa12.22□□□□□ -0.45
LINC00661-202ENST00000547102 AGXT2Q9BYV1 514 aa12.22□□□□□ -0.45
LINC00661-202ENST00000547102 C6orf50Q9HD87 102 aa12.22□□□□□ -0.45
LINC00661-202ENST00000547102 JPH1Q9HDC5 661 aaPredicted RBP12.22□□□□□ -0.45
LINC00661-202ENST00000547102 ESYT2A0FGR8 921 aa12.21□□□□□ -0.45
LINC00661-202ENST00000547102 RSPH10B2B2RC85 870 aa12.21□□□□□ -0.45
LINC00661-202ENST00000547102 KIF28PB7ZC32 967 aa12.21□□□□□ -0.45
LINC00661-202ENST00000547102 PRPF3O43395 683 aaKnown RBP12.21□□□□□ -0.45
LINC00661-202ENST00000547102 EFCAB14O75071 495 aa12.21□□□□□ -0.45
LINC00661-202ENST00000547102 ATP9AO75110 1047 aa12.21□□□□□ -0.45
LINC00661-202ENST00000547102 CAND2O75155 1236 aa12.21□□□□□ -0.45
LINC00661-202ENST00000547102 RSPH10BP0C881 870 aa12.21□□□□□ -0.45
LINC00661-202ENST00000547102 GNA11P29992 359 aa12.21□□□□□ -0.45
LINC00661-202ENST00000547102 SREBF1P36956 1147 aa12.21□□□□□ -0.45
LINC00661-202ENST00000547102 ARHGAP4P98171 946 aa12.21□□□□□ -0.45
LINC00661-202ENST00000547102 CEP55Q53EZ4 464 aa12.21□□□□□ -0.45
LINC00661-202ENST00000547102 ZNF618Q5T7W0 954 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms