RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 ARP10275 920 aa16.45■□□□□ 0.22
DDX54-203ENST00000546869 GJB2P29033 226 aa16.45■□□□□ 0.22
DDX54-203ENST00000546869 CDK7P50613 346 aa16.45■□□□□ 0.22
DDX54-203ENST00000546869 HSDL1Q3SXM5 330 aa16.45■□□□□ 0.22
DDX54-203ENST00000546869 CYFIP1Q7L576 1253 aa16.45■□□□□ 0.22
DDX54-203ENST00000546869 NEK8Q86SG6 692 aa16.45■□□□□ 0.22
DDX54-203ENST00000546869 LENG9Q96B70 501 aa16.45■□□□□ 0.22
DDX54-203ENST00000546869 TOX2Q96NM4 488 aa16.45■□□□□ 0.22
DDX54-203ENST00000546869 MTG1Q9BT17 334 aaPredicted RBP16.45■□□□□ 0.22
DDX54-203ENST00000546869 TBC1D22BQ9NU19 505 aa16.45■□□□□ 0.22
DDX54-203ENST00000546869 A0A0U1RQG5 324 aaPredicted RBP16.44■□□□□ 0.22
DDX54-203ENST00000546869 GCFC2P16383 781 aaKnown RBP16.44■□□□□ 0.22
DDX54-203ENST00000546869 NR5A1Q13285 461 aa16.44■□□□□ 0.22
DDX54-203ENST00000546869 INF2Q27J81 1249 aa16.44■□□□□ 0.22
DDX54-203ENST00000546869 CXCL17Q6UXB2 119 aa16.44■□□□□ 0.22
DDX54-203ENST00000546869 PIK3AP1Q6ZUJ8 805 aa16.44■□□□□ 0.22
DDX54-203ENST00000546869 FERMT2Q96AC1 680 aa16.44■□□□□ 0.22
DDX54-203ENST00000546869 GPR20Q99678 358 aa16.44■□□□□ 0.22
DDX54-203ENST00000546869 BCAS3Q9H6U6 928 aa16.44■□□□□ 0.22
DDX54-203ENST00000546869 IPO5O00410 1097 aaKnown RBP16.43■□□□□ 0.22
DDX54-203ENST00000546869 DHX15O43143 795 aaKnown RBP16.43■□□□□ 0.22
DDX54-203ENST00000546869 U2AF2P26368 475 aaKnown RBP eCLIP16.43■□□□□ 0.22
DDX54-203ENST00000546869 ITGB3BPQ13352 177 aaPredicted RBP16.43■□□□□ 0.22
DDX54-203ENST00000546869 LRRC26Q2I0M4 334 aa16.43■□□□□ 0.22
DDX54-203ENST00000546869 PRR16Q569H4 304 aa16.43■□□□□ 0.22
DDX54-203ENST00000546869 EARS2Q5JPH6 523 aaKnown RBP16.43■□□□□ 0.22
DDX54-203ENST00000546869 ANKRD33Q7Z3H0 272 aa16.43■□□□□ 0.22
DDX54-203ENST00000546869 SEPT1Q8WYJ6 367 aa16.43■□□□□ 0.22
DDX54-203ENST00000546869 RIT2Q99578 217 aa16.43■□□□□ 0.22
DDX54-203ENST00000546869 SDF4Q9BRK5 362 aa16.43■□□□□ 0.22
DDX54-203ENST00000546869 ARVCFO00192 962 aa16.42■□□□□ 0.22
DDX54-203ENST00000546869 NOP56O00567 594 aaKnown RBP16.42■□□□□ 0.22
DDX54-203ENST00000546869 ATG7O95352 703 aa16.42■□□□□ 0.22
DDX54-203ENST00000546869 MYL3P08590 195 aa16.42■□□□□ 0.22
DDX54-203ENST00000546869 PTPN11Q06124 597 aaPredicted RBP16.42■□□□□ 0.22
DDX54-203ENST00000546869 ITGA7Q13683 1181 aa16.42■□□□□ 0.22
DDX54-203ENST00000546869 DPF3Q92784 378 aa16.42■□□□□ 0.22
DDX54-203ENST00000546869 KAT2BQ92831 832 aa16.42■□□□□ 0.22
DDX54-203ENST00000546869 ZNF577Q9BSK1 485 aa16.42■□□□□ 0.22
DDX54-203ENST00000546869 C16orf70Q9BSU1 422 aa16.42■□□□□ 0.22
DDX54-203ENST00000546869 KATNAL1Q9BW62 490 aa16.42■□□□□ 0.22
DDX54-203ENST00000546869 JPH1Q9HDC5 661 aaPredicted RBP16.42■□□□□ 0.22
DDX54-203ENST00000546869 SLC9A2Q9UBY0 812 aa16.42■□□□□ 0.22
DDX54-203ENST00000546869 GRIN2DO15399 1336 aa16.42■□□□□ 0.22
DDX54-203ENST00000546869 MROH7Q68CQ1 1323 aa16.42■□□□□ 0.22
DDX54-203ENST00000546869 HAS3O00219 553 aa16.41■□□□□ 0.22
DDX54-203ENST00000546869 TBX3O15119 743 aa16.41■□□□□ 0.22
DDX54-203ENST00000546869 MSH4O15457 936 aa16.41■□□□□ 0.22
DDX54-203ENST00000546869 EVI5O60447 810 aa16.41■□□□□ 0.22
DDX54-203ENST00000546869 F2P00734 622 aa16.41■□□□□ 0.22
DDX54-203ENST00000546869 PDCP20941 246 aa16.41■□□□□ 0.22
DDX54-203ENST00000546869 ATN1P54259 1190 aaPredicted RBP16.41■□□□□ 0.22
DDX54-203ENST00000546869 LETM2Q2VYF4 491 aa16.41■□□□□ 0.22
DDX54-203ENST00000546869 LARP1BQ659C4 914 aaKnown RBP16.41■□□□□ 0.22
DDX54-203ENST00000546869 NFRKBQ6P4R8 1299 aa16.41■□□□□ 0.22
DDX54-203ENST00000546869 SESTD1Q86VW0 696 aa16.41■□□□□ 0.22
DDX54-203ENST00000546869 NOSTRINQ8IVI9 506 aa16.41■□□□□ 0.22
DDX54-203ENST00000546869 HSCBQ8IWL3 235 aa16.41■□□□□ 0.22
DDX54-203ENST00000546869 SLC5A5Q92911 643 aa16.41■□□□□ 0.22
DDX54-203ENST00000546869 VTI1AQ96AJ9 217 aa16.41■□□□□ 0.22
DDX54-203ENST00000546869 NR2E3Q9Y5X4 410 aa16.41■□□□□ 0.22
DDX54-203ENST00000546869 GSTTP1A0A1W2PQM5 241 aa16.4■□□□□ 0.22
DDX54-203ENST00000546869 TDP2O95551 362 aa16.4■□□□□ 0.22
DDX54-203ENST00000546869 TRAPPC10P48553 1259 aa16.4■□□□□ 0.22
DDX54-203ENST00000546869 RTP1P59025 263 aa16.4■□□□□ 0.22
DDX54-203ENST00000546869 GUCY1B3Q02153 619 aa16.4■□□□□ 0.22
DDX54-203ENST00000546869 ORC2Q13416 577 aaPredicted RBP16.4■□□□□ 0.22
DDX54-203ENST00000546869 ZNF746Q6NUN9 644 aaPredicted RBP16.4■□□□□ 0.22
DDX54-203ENST00000546869 ETNPPLQ8TBG4 499 aa16.4■□□□□ 0.22
DDX54-203ENST00000546869 FAM20AQ96MK3 541 aa16.4■□□□□ 0.22
DDX54-203ENST00000546869 KCNMB3Q9NPA1 279 aa16.4■□□□□ 0.22
DDX54-203ENST00000546869 DDX25Q9UHL0 483 aaKnown RBP16.4■□□□□ 0.22
DDX54-203ENST00000546869 MYH7BA7E2Y1 1941 aa16.39■□□□□ 0.21
DDX54-203ENST00000546869 IGKV6D-21A0A0A0MT36 114 aa16.39■□□□□ 0.21
DDX54-203ENST00000546869 FAM205CA6NFA0 338 aa16.39■□□□□ 0.21
DDX54-203ENST00000546869 CCNT1O60563 726 aaKnown RBP16.39■□□□□ 0.21
DDX54-203ENST00000546869 LGR5O75473 907 aa16.39■□□□□ 0.21
DDX54-203ENST00000546869 LGALS2P05162 132 aa16.39■□□□□ 0.21
DDX54-203ENST00000546869 PDIA4P13667 645 aaKnown RBP16.39■□□□□ 0.21
DDX54-203ENST00000546869 FOSBP53539 338 aa16.39■□□□□ 0.21
DDX54-203ENST00000546869 KRT76Q01546 638 aa16.39■□□□□ 0.21
DDX54-203ENST00000546869 NBPF20Q3BBV1 942 aa16.39■□□□□ 0.21
DDX54-203ENST00000546869 SMAP1Q8IYB5 467 aaPredicted RBP16.39■□□□□ 0.21
DDX54-203ENST00000546869 PKD2L1Q9P0L9 805 aa16.39■□□□□ 0.21
DDX54-203ENST00000546869 DCDC2CA8MYV0 355 aa16.38■□□□□ 0.21
DDX54-203ENST00000546869 H3BQV1 296 aa16.38■□□□□ 0.21
DDX54-203ENST00000546869 H3BRB1 525 aa16.38■□□□□ 0.21
DDX54-203ENST00000546869 PSMD10O75832 226 aa16.38■□□□□ 0.21
DDX54-203ENST00000546869 CCNE2O96020 404 aa16.38■□□□□ 0.21
DDX54-203ENST00000546869 CD4P01730 458 aa16.38■□□□□ 0.21
DDX54-203ENST00000546869 TCF7P36402 384 aaPredicted RBP16.38■□□□□ 0.21
DDX54-203ENST00000546869 PSEN2P49810 448 aa16.38■□□□□ 0.21
DDX54-203ENST00000546869 ACTR2P61160 394 aa16.38■□□□□ 0.21
DDX54-203ENST00000546869 PSMC6P62333 389 aa16.38■□□□□ 0.21
DDX54-203ENST00000546869 TLE2Q04725 743 aa16.38■□□□□ 0.21
DDX54-203ENST00000546869 GNL2Q13823 731 aaKnown RBP16.38■□□□□ 0.21
DDX54-203ENST00000546869 TRIM60Q495X7 471 aa16.38■□□□□ 0.21
DDX54-203ENST00000546869 B3GNT9Q6UX72 402 aa16.38■□□□□ 0.21
DDX54-203ENST00000546869 ABHD15Q6UXT9 468 aa16.38■□□□□ 0.21
DDX54-203ENST00000546869 PLPPR4Q7Z2D5 763 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms