RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 FOXO4P98177 505 aa13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 SEMA3FQ13275 785 aa13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 MAP3K21Q5TCX8 1036 aa13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 SEPT14Q6ZU15 432 aa13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 NLRX1Q86UT6 975 aa13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 SMC1BQ8NDV3 1235 aa13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 TXLNGQ9NUQ3 528 aa13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 SLAIN2Q9P270 581 aa13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 USP17L3A6NCW0 530 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 USP17L4A6NCW7 530 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 PABPN1LA6NDY0 278 aaKnown RBP13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 SH3BGRP55822 239 aaPredicted RBP13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 MECOMQ03112 1051 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 GFPT1Q06210 699 aaPredicted RBP13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 SEPT6Q14141 434 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 XKR9Q5GH70 373 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 USP17L1Q7RTZ2 530 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 KRT26Q7Z3Y9 468 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 BCAP29Q9UHQ4 241 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 ANAPC5Q9UJX4 755 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 TAF6LQ9Y6J9 622 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 ZBED4O75132 1171 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 BAG2O95816 211 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 BPIFB4P59827 614 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 ATP2C1P98194 919 aaPredicted RBP13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 PTK2Q05397 1052 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 NR1I3Q14994 352 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 KSR1Q8IVT5 923 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 CCDC17Q96LX7 622 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 LEMD3Q9Y2U8 911 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 ITIH6Q6UXX5 1313 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 PVALEFA0A1B0GWK0 134 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 GRID2IPA4D2P6 1211 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 MAPK4P31152 587 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 SNX1Q13596 522 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 AP1ARQ63HQ0 302 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 ATG9AQ7Z3C6 839 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 TRIM11Q96F44 468 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 SPATS2LQ9NUQ6 558 aaKnown RBP13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 THRAP3Q9Y2W1 955 aaKnown RBP13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 IQGAP1P46940 1657 aa13.26□□□□□ -0.29
NPC1L1-204ENST00000546276 CASQ2O14958 399 aaPredicted RBP13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 SART1O43290 800 aaKnown RBP13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 LIG4P49917 911 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 KAZNQ674X7 775 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 DIS3Q9Y2L1 958 aaKnown RBP13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 KIF3CO14782 793 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 NCK2O43639 380 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 SLC8A3P57103 927 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 ADCY1Q08828 1119 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 RBM43Q6ZSC3 357 aaKnown RBP13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 DEPTORQ8TB45 409 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 RUBCNQ92622 972 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 KCNB2Q92953 911 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 PSD3Q9NYI0 1048 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 ADD3Q9UEY8 706 aaKnown RBP13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 XDHP47989 1333 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 ESYT3A0FGR9 886 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 GMNCA6NCL1 334 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 MEIS1O00470 390 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 CTDNEP1O95476 244 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 MMEP08473 750 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 KRT19P08727 400 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 CYP4F22Q6NT55 531 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 AFAP1L2Q8N4X5 818 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 SPATA4Q8NEY3 305 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 CCHCR1Q8TD31 782 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 PPP4R1Q8TF05 950 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 LMTK2Q8IWU2 1503 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 H0YCG3 227 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 STAM2O75886 525 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 TMED2Q15363 201 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 NBPF9Q3BBW0 867 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 TBC1D1Q86TI0 1168 aaPredicted RBP13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 NLRP14Q86W24 1093 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 MMS19Q96T76 1030 aa13.25□□□□□ -0.29
NPC1L1-204ENST00000546276 MYO3AQ8NEV4 1616 aa13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 CEP152O94986 1710 aa13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 GSG1L2A8MUP6 293 aa13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 DAPK3O43293 454 aa13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 FDPSP14324 419 aaKnown RBP13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 GUCY1A2P33402 732 aa13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 RAD9BQ6WBX8 426 aa13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 GBP7Q8N8V2 638 aaPredicted RBP13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 ATP6V1G3Q96LB4 118 aa13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 ELAC2Q9BQ52 826 aaKnown RBP13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 DNAJC5Q9H3Z4 198 aa13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 CLGNO14967 610 aa13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 DMP1Q13316 513 aaPredicted RBP13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 SCARF1Q14162 830 aa13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 MROH7-TTC4A0A0A0MT08 1334 aa13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 CHGBP05060 677 aa13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 SLC16A2P36021 539 aa13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 MAP7Q14244 749 aa13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 TAF11Q15544 211 aa13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 FAM83BQ5T0W9 1011 aa13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 KCTD1Q719H9 257 aa13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 RHOT2Q8IXI1 618 aa13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 TTC16Q8NEE8 873 aa13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 CDHR2Q9BYE9 1310 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms