RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 ITGB3BPQ13352 177 aaPredicted RBP23.59■■□□□ 1.37
SCARB1-211ENST00000546215 HSDL1Q3SXM5 330 aa23.59■■□□□ 1.37
SCARB1-211ENST00000546215 PPTC7Q8NI37 304 aa23.59■■□□□ 1.37
SCARB1-211ENST00000546215 PAWRQ96IZ0 340 aaKnown RBP23.59■■□□□ 1.37
SCARB1-211ENST00000546215 COL6A1P12109 1028 aa23.58■■□□□ 1.37
SCARB1-211ENST00000546215 GCFC2P16383 781 aaKnown RBP23.58■■□□□ 1.37
SCARB1-211ENST00000546215 PCSK9Q8NBP7 692 aaKnown RBP23.58■■□□□ 1.37
SCARB1-211ENST00000546215 SPATA33Q96N06 139 aa23.58■■□□□ 1.37
SCARB1-211ENST00000546215 DDX25Q9UHL0 483 aaKnown RBP23.58■■□□□ 1.37
SCARB1-211ENST00000546215 IPO5O00410 1097 aaKnown RBP23.57■■□□□ 1.36
SCARB1-211ENST00000546215 MSH4O15457 936 aa23.57■■□□□ 1.36
SCARB1-211ENST00000546215 SLC37A4O43826 429 aa23.57■■□□□ 1.36
SCARB1-211ENST00000546215 ASGR1P07306 291 aa23.57■■□□□ 1.36
SCARB1-211ENST00000546215 ACLYP53396 1101 aa23.57■■□□□ 1.36
SCARB1-211ENST00000546215 UIMC1Q96RL1 719 aa23.57■■□□□ 1.36
SCARB1-211ENST00000546215 NAP1L4Q99733 375 aaKnown RBP23.57■■□□□ 1.36
SCARB1-211ENST00000546215 ZNF577Q9BSK1 485 aa23.57■■□□□ 1.36
SCARB1-211ENST00000546215 PHF24Q9UPV7 400 aa23.57■■□□□ 1.36
SCARB1-211ENST00000546215 TELO2Q9Y4R8 837 aa23.57■■□□□ 1.36
SCARB1-211ENST00000546215 NFASCO94856 1347 aa23.57■■□□□ 1.36
SCARB1-211ENST00000546215 VPS37CA5D8V6 355 aaPredicted RBP23.57■■□□□ 1.36
SCARB1-211ENST00000546215 MOXD2PA6NHM9 499 aa23.57■■□□□ 1.36
SCARB1-211ENST00000546215 DHX15O43143 795 aaKnown RBP23.57■■□□□ 1.36
SCARB1-211ENST00000546215 CAPN15O75808 1086 aa23.57■■□□□ 1.36
SCARB1-211ENST00000546215 MMP3P08254 477 aa23.57■■□□□ 1.36
SCARB1-211ENST00000546215 BRDTQ58F21 947 aaPredicted RBP23.57■■□□□ 1.36
SCARB1-211ENST00000546215 NECAB2Q7Z6G3 386 aa23.57■■□□□ 1.36
SCARB1-211ENST00000546215 ZEB2O60315 1214 aa23.56■■□□□ 1.36
SCARB1-211ENST00000546215 ETNPPLQ8TBG4 499 aa23.56■■□□□ 1.36
SCARB1-211ENST00000546215 SDF4Q9BRK5 362 aa23.56■■□□□ 1.36
SCARB1-211ENST00000546215 C11orf49Q9H6J7 331 aa23.56■■□□□ 1.36
SCARB1-211ENST00000546215 MTMR6Q9Y217 621 aa23.56■■□□□ 1.36
SCARB1-211ENST00000546215 STX6O43752 255 aa23.55■■□□□ 1.36
SCARB1-211ENST00000546215 HOXD8P13378 290 aaPredicted RBP23.55■■□□□ 1.36
SCARB1-211ENST00000546215 TRAPPC10P48553 1259 aa23.55■■□□□ 1.36
SCARB1-211ENST00000546215 TOB1P50616 345 aaPredicted RBP23.55■■□□□ 1.36
SCARB1-211ENST00000546215 FERMT2Q96AC1 680 aa23.55■■□□□ 1.36
SCARB1-211ENST00000546215 GPR20Q99678 358 aa23.55■■□□□ 1.36
SCARB1-211ENST00000546215 SENP6Q9GZR1 1112 aaPredicted RBP23.55■■□□□ 1.36
SCARB1-211ENST00000546215 JPH1Q9HDC5 661 aaPredicted RBP23.55■■□□□ 1.36
SCARB1-211ENST00000546215 SLC9A2Q9UBY0 812 aa23.55■■□□□ 1.36
SCARB1-211ENST00000546215 A0A1W2PQ45 241 aaPredicted RBP23.54■■□□□ 1.36
SCARB1-211ENST00000546215 A0A1W2PQY0 241 aa23.54■■□□□ 1.36
SCARB1-211ENST00000546215 PPFIA4O75335 1185 aa23.54■■□□□ 1.36
SCARB1-211ENST00000546215 ATP2B1P20020 1258 aa23.54■■□□□ 1.36
SCARB1-211ENST00000546215 PURAQ00577 322 aaKnown RBP23.54■■□□□ 1.36
SCARB1-211ENST00000546215 DGKDQ16760 1214 aa23.54■■□□□ 1.36
SCARB1-211ENST00000546215 CXCL17Q6UXB2 119 aa23.54■■□□□ 1.36
SCARB1-211ENST00000546215 SLC5A5Q92911 643 aa23.54■■□□□ 1.36
SCARB1-211ENST00000546215 GJA10Q969M2 543 aa23.54■■□□□ 1.36
SCARB1-211ENST00000546215 KCNMB3Q9NPA1 279 aa23.54■■□□□ 1.36
SCARB1-211ENST00000546215 TBC1D22BQ9NU19 505 aa23.54■■□□□ 1.36
SCARB1-211ENST00000546215 NOP56O00567 594 aaKnown RBP23.53■■□□□ 1.36
SCARB1-211ENST00000546215 SP4Q02446 784 aa23.53■■□□□ 1.36
SCARB1-211ENST00000546215 POTEDQ86YR6 584 aa23.53■■□□□ 1.36
SCARB1-211ENST00000546215 POLR3EQ9NVU0 708 aa23.53■■□□□ 1.36
SCARB1-211ENST00000546215 NOL7Q9UMY1 257 aaKnown RBP23.53■■□□□ 1.36
SCARB1-211ENST00000546215 KPNA6O60684 536 aa23.52■■□□□ 1.36
SCARB1-211ENST00000546215 MYL3P08590 195 aa23.52■■□□□ 1.36
SCARB1-211ENST00000546215 RGS19P49795 217 aa23.52■■□□□ 1.36
SCARB1-211ENST00000546215 FERMT3Q86UX7 667 aa23.52■■□□□ 1.36
SCARB1-211ENST00000546215 HAS1Q92839 578 aa23.52■■□□□ 1.36
SCARB1-211ENST00000546215 RIT2Q99578 217 aa23.52■■□□□ 1.36
SCARB1-211ENST00000546215 GSTTP1A0A1W2PQM5 241 aa23.52■■□□□ 1.36
SCARB1-211ENST00000546215 PSMD10O75832 226 aa23.52■■□□□ 1.36
SCARB1-211ENST00000546215 CABYRO75952 493 aa23.52■■□□□ 1.36
SCARB1-211ENST00000546215 CCNE2O96020 404 aa23.52■■□□□ 1.36
SCARB1-211ENST00000546215 TTC38Q5R3I4 469 aa23.52■■□□□ 1.36
SCARB1-211ENST00000546215 SEPT1Q8WYJ6 367 aa23.52■■□□□ 1.36
SCARB1-211ENST00000546215 FAM20AQ96MK3 541 aa23.52■■□□□ 1.36
SCARB1-211ENST00000546215 GLT1D1Q96MS3 346 aa23.52■■□□□ 1.36
SCARB1-211ENST00000546215 ELP1O95163 1332 aa23.51■■□□□ 1.35
SCARB1-211ENST00000546215 DDX39AO00148 427 aaKnown RBP23.51■■□□□ 1.35
SCARB1-211ENST00000546215 TBX3O15119 743 aa23.51■■□□□ 1.35
SCARB1-211ENST00000546215 NEMFO60524 1076 aa23.51■■□□□ 1.35
SCARB1-211ENST00000546215 PDIA4P13667 645 aaKnown RBP23.51■■□□□ 1.35
SCARB1-211ENST00000546215 MCM7P33993 719 aa23.51■■□□□ 1.35
SCARB1-211ENST00000546215 ACTR2P61160 394 aa23.51■■□□□ 1.35
SCARB1-211ENST00000546215 NBR1Q14596 966 aa23.51■■□□□ 1.35
SCARB1-211ENST00000546215 ZNF174Q15697 407 aa23.51■■□□□ 1.35
SCARB1-211ENST00000546215 LRCH2Q5VUJ6 765 aa23.51■■□□□ 1.35
SCARB1-211ENST00000546215 BRAPQ7Z569 592 aa23.51■■□□□ 1.35
SCARB1-211ENST00000546215 MTG1Q9BT17 334 aaPredicted RBP23.51■■□□□ 1.35
SCARB1-211ENST00000546215 RESTQ13127 1097 aa23.5■■□□□ 1.35
SCARB1-211ENST00000546215 ORC2Q13416 577 aaPredicted RBP23.5■■□□□ 1.35
SCARB1-211ENST00000546215 RILPL1Q5EBL4 403 aa23.5■■□□□ 1.35
SCARB1-211ENST00000546215 KAT2BQ92831 832 aa23.5■■□□□ 1.35
SCARB1-211ENST00000546215 STARD7Q9NQZ5 370 aa23.5■■□□□ 1.35
SCARB1-211ENST00000546215 PCDHB6Q9Y5E3 794 aa23.5■■□□□ 1.35
SCARB1-211ENST00000546215 SCN10AQ9Y5Y9 1956 aa23.5■■□□□ 1.35
SCARB1-211ENST00000546215 GAS7O60861 476 aa23.49■■□□□ 1.35
SCARB1-211ENST00000546215 ATG7O95352 703 aa23.49■■□□□ 1.35
SCARB1-211ENST00000546215 TCF7P36402 384 aaPredicted RBP23.49■■□□□ 1.35
SCARB1-211ENST00000546215 ZNF746Q6NUN9 644 aaPredicted RBP23.49■■□□□ 1.35
SCARB1-211ENST00000546215 B3GNT9Q6UX72 402 aa23.49■■□□□ 1.35
SCARB1-211ENST00000546215 SLC39A5Q6ZMH5 540 aa23.49■■□□□ 1.35
SCARB1-211ENST00000546215 MTMR9Q96QG7 549 aa23.49■■□□□ 1.35
SCARB1-211ENST00000546215 C16orf70Q9BSU1 422 aa23.49■■□□□ 1.35
SCARB1-211ENST00000546215 TEKT3Q9BXF9 490 aa23.49■■□□□ 1.35
SCARB1-211ENST00000546215 TMEM60Q9H2L4 133 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms