RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-215ENST00000546102 CCDC7Q96M83 1385 aa4.44□□□□□ -1.7
CUL3-215ENST00000546102 BLACEA4D250 179 aa4.44□□□□□ -1.7
CUL3-215ENST00000546102 RGS13O14921 159 aa4.44□□□□□ -1.7
CUL3-215ENST00000546102 PRPF3O43395 683 aaKnown RBP4.44□□□□□ -1.7
CUL3-215ENST00000546102 CBFA2T2O43439 604 aa4.44□□□□□ -1.7
CUL3-215ENST00000546102 BRINP1O60477 761 aa4.44□□□□□ -1.7
CUL3-215ENST00000546102 UBOX5O94941 541 aa4.44□□□□□ -1.7
CUL3-215ENST00000546102 NPTXRO95502 500 aa4.44□□□□□ -1.7
CUL3-215ENST00000546102 ASLP04424 464 aa4.44□□□□□ -1.7
CUL3-215ENST00000546102 TMEM253P0C7T8 217 aa4.44□□□□□ -1.7
CUL3-215ENST00000546102 JMJD7P0C870 316 aa4.44□□□□□ -1.7
CUL3-215ENST00000546102 ZNF865P0CJ78 1059 aaPredicted RBP4.44□□□□□ -1.7
CUL3-215ENST00000546102 POU3F2P20265 443 aaPredicted RBP4.44□□□□□ -1.7
CUL3-215ENST00000546102 GBP1P32455 592 aa4.44□□□□□ -1.7
CUL3-215ENST00000546102 PDE6BP35913 854 aa4.44□□□□□ -1.7
CUL3-215ENST00000546102 ID4P47928 161 aa4.44□□□□□ -1.7
CUL3-215ENST00000546102 C4orf46Q504U0 113 aa4.44□□□□□ -1.7
CUL3-215ENST00000546102 DCAF15Q66K64 600 aa4.44□□□□□ -1.7
CUL3-215ENST00000546102 MCATQ8IVS2 390 aaKnown RBP4.44□□□□□ -1.7
CUL3-215ENST00000546102 SPACA3Q8IXA5 215 aa4.44□□□□□ -1.7
CUL3-215ENST00000546102 CCDC144CPQ8IYA2 1237 aa4.44□□□□□ -1.7
CUL3-215ENST00000546102 SLFN12Q8IYM2 578 aa4.44□□□□□ -1.7
CUL3-215ENST00000546102 CNTD1Q8N815 330 aa4.44□□□□□ -1.7
CUL3-215ENST00000546102 USP7Q93009 1102 aa4.44□□□□□ -1.7
CUL3-215ENST00000546102 SLC39A13Q96H72 371 aa4.44□□□□□ -1.7
CUL3-215ENST00000546102 TMEM87BQ96K49 555 aa4.44□□□□□ -1.7
CUL3-215ENST00000546102 DPH2Q9BQC3 489 aaPredicted RBP4.44□□□□□ -1.7
CUL3-215ENST00000546102 CARS2Q9HA77 564 aaKnown RBP4.44□□□□□ -1.7
CUL3-215ENST00000546102 ZNF180Q9UJW8 692 aa4.44□□□□□ -1.7
CUL3-215ENST00000546102 TPX2Q9ULW0 747 aaKnown RBP4.44□□□□□ -1.7
CUL3-215ENST00000546102 RIMS1Q86UR5 1692 aaKnown RBP4.44□□□□□ -1.7
CUL3-215ENST00000546102 PITPNM2Q9BZ72 1349 aa4.44□□□□□ -1.7
CUL3-215ENST00000546102 UBR1Q8IWV7 1749 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 A2ML1A8K2U0 1454 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 CFAP65Q6ZU64 1925 aaKnown RBP4.43□□□□□ -1.7
CUL3-215ENST00000546102 ZNF142P52746 1687 aaPredicted RBP4.43□□□□□ -1.7
CUL3-215ENST00000546102 QRICH2Q9H0J4 1663 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 E2F8A0AVK6 867 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 NOP56O00567 594 aaKnown RBP4.43□□□□□ -1.7
CUL3-215ENST00000546102 GABRDO14764 452 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 FANCGO15287 622 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 CLEC3AO75596 197 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 RAC2P15153 192 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 PAX3P23760 479 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 IGFALSP35858 605 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 GABREP78334 506 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 HLTFQ14527 1009 aaKnown RBP eCLIP4.43□□□□□ -1.7
CUL3-215ENST00000546102 CFAP100Q494V2 611 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 FAM102BQ5T8I3 360 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 PRR23BQ6ZRT6 265 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 TICAM2Q86XR7 235 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 TCEAL8Q8IYN2 117 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 SAMD3Q8N6K7 520 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 ZNF513Q8N8E2 541 aaPredicted RBP4.43□□□□□ -1.7
CUL3-215ENST00000546102 BVESQ8NE79 360 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 GSTCDQ8NEC7 633 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 BAHD1Q8TBE0 780 aaPredicted RBP4.43□□□□□ -1.7
CUL3-215ENST00000546102 BTN2A2Q8WVV5 523 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 SMARCC1Q92922 1105 aaPredicted RBP4.43□□□□□ -1.7
CUL3-215ENST00000546102 IL17RAQ96F46 866 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 SCLYQ96I15 445 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 CCDC74BQ96LY2 380 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 TTC1Q99614 292 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 KRTAP4-2Q9BYR5 136 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 PUS7LQ9H0K6 701 aaKnown RBP4.43□□□□□ -1.7
CUL3-215ENST00000546102 GBP3Q9H0R5 595 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 NSUN3Q9H649 340 aaKnown RBP4.43□□□□□ -1.7
CUL3-215ENST00000546102 ADGRB1O14514 1584 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 TNKSO95271 1327 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 WASHC2AQ641Q2 1341 aa4.43□□□□□ -1.7
CUL3-215ENST00000546102 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.42□□□□□ -1.7
CUL3-215ENST00000546102 TCAF2A6NFQ2 919 aa4.42□□□□□ -1.7
CUL3-215ENST00000546102 B8ZZF3 427 aa4.42□□□□□ -1.7
CUL3-215ENST00000546102 NEMP1O14524 444 aa4.42□□□□□ -1.7
CUL3-215ENST00000546102 ANP32CO43423 234 aa4.42□□□□□ -1.7
CUL3-215ENST00000546102 DLX3O60479 287 aa4.42□□□□□ -1.7
CUL3-215ENST00000546102 EFCAB14O75071 495 aa4.42□□□□□ -1.7
CUL3-215ENST00000546102 PPFIA4O75335 1185 aa4.42□□□□□ -1.7
CUL3-215ENST00000546102 PPM1BO75688 479 aa4.42□□□□□ -1.7
CUL3-215ENST00000546102 CAPNS1P04632 268 aa4.42□□□□□ -1.7
CUL3-215ENST00000546102 PYGMP11217 842 aa4.42□□□□□ -1.7
CUL3-215ENST00000546102 FLT3P36888 993 aa4.42□□□□□ -1.7
CUL3-215ENST00000546102 GDNFP39905 211 aa4.42□□□□□ -1.7
CUL3-215ENST00000546102 RING1Q06587 406 aa4.42□□□□□ -1.7
CUL3-215ENST00000546102 DIP2AQ14689 1571 aa4.42□□□□□ -1.7
CUL3-215ENST00000546102 RALBP1Q15311 655 aa4.42□□□□□ -1.7
CUL3-215ENST00000546102 NKPD1Q17RQ9 610 aa4.42□□□□□ -1.7
CUL3-215ENST00000546102 SKOR2Q2VWA4 1001 aaPredicted RBP4.42□□□□□ -1.7
CUL3-215ENST00000546102 SFRP5Q5T4F7 317 aa4.42□□□□□ -1.7
CUL3-215ENST00000546102 ZBTB37Q5TC79 503 aa4.42□□□□□ -1.7
CUL3-215ENST00000546102 SYDE2Q5VT97 1194 aa4.42□□□□□ -1.7
CUL3-215ENST00000546102 SLC6A19Q695T7 634 aa4.42□□□□□ -1.7
CUL3-215ENST00000546102 CDCA2Q69YH5 1023 aaPredicted RBP4.42□□□□□ -1.7
CUL3-215ENST00000546102 NXNQ6DKJ4 435 aa4.42□□□□□ -1.7
CUL3-215ENST00000546102 CIAPIN1Q6FI81 312 aa4.42□□□□□ -1.7
CUL3-215ENST00000546102 MRPL41Q8IXM3 137 aaKnown RBP4.42□□□□□ -1.7
CUL3-215ENST00000546102 ARHGEF28Q8N1W1 1705 aaKnown RBP4.42□□□□□ -1.7
CUL3-215ENST00000546102 MAGEB6Q8N7X4 407 aa4.42□□□□□ -1.7
CUL3-215ENST00000546102 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.42□□□□□ -1.7
CUL3-215ENST00000546102 ADCY4Q8NFM4 1077 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms