RNA–Protein interactions for RNA: ENST00000545784.5

LINC00939-203, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best)

Gene LINC00939, Length 2,078 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-203ENST00000545784 U2AF2P26368 475 aaKnown RBP eCLIP11.71□□□□□ -0.53
LINC00939-203ENST00000545784 GSDMDP57764 484 aa11.71□□□□□ -0.53
LINC00939-203ENST00000545784 FAM173BQ6P4H8 233 aa11.71□□□□□ -0.53
LINC00939-203ENST00000545784 C16orf45Q96MC5 204 aaPredicted RBP11.71□□□□□ -0.53
LINC00939-203ENST00000545784 ARID3AQ99856 593 aa11.71□□□□□ -0.53
LINC00939-203ENST00000545784 FOXP1Q9H334 677 aaPredicted RBP11.71□□□□□ -0.53
LINC00939-203ENST00000545784 KCND1Q9NSA2 647 aa11.71□□□□□ -0.53
LINC00939-203ENST00000545784 ANO10Q9NW15 660 aa11.71□□□□□ -0.53
LINC00939-203ENST00000545784 NRBP1Q9UHY1 535 aa11.71□□□□□ -0.53
LINC00939-203ENST00000545784 RCOR1Q9UKL0 485 aa11.71□□□□□ -0.53
LINC00939-203ENST00000545784 FAM205CA6NFA0 338 aa11.71□□□□□ -0.54
LINC00939-203ENST00000545784 BECN2A8MW95 431 aa11.71□□□□□ -0.54
LINC00939-203ENST00000545784 KINO60870 393 aaKnown RBP11.71□□□□□ -0.54
LINC00939-203ENST00000545784 TUBB4AP04350 444 aa11.71□□□□□ -0.54
LINC00939-203ENST00000545784 PRKAR2AP13861 404 aaKnown RBP11.71□□□□□ -0.54
LINC00939-203ENST00000545784 ARHGAP4P98171 946 aa11.71□□□□□ -0.54
LINC00939-203ENST00000545784 PDE4DQ08499 809 aa11.71□□□□□ -0.54
LINC00939-203ENST00000545784 ACVR2BQ13705 512 aa11.71□□□□□ -0.54
LINC00939-203ENST00000545784 STXBP2Q15833 593 aa11.71□□□□□ -0.54
LINC00939-203ENST00000545784 TPD52L1Q16890 204 aaPredicted RBP11.71□□□□□ -0.54
LINC00939-203ENST00000545784 SLC9C1Q4G0N8 1177 aa11.71□□□□□ -0.54
LINC00939-203ENST00000545784 KRT25Q7Z3Z0 450 aa11.71□□□□□ -0.54
LINC00939-203ENST00000545784 TSC1Q92574 1164 aa11.71□□□□□ -0.54
LINC00939-203ENST00000545784 ZFP91Q96JP5 570 aaPredicted RBP11.71□□□□□ -0.54
LINC00939-203ENST00000545784 ABHD16BQ9H3Z7 469 aa11.71□□□□□ -0.54
LINC00939-203ENST00000545784 PDGFCQ9NRA1 345 aa11.71□□□□□ -0.54
LINC00939-203ENST00000545784 B4DLN1 442 aa11.7□□□□□ -0.54
LINC00939-203ENST00000545784 MYCLP12524 364 aaPredicted RBP11.7□□□□□ -0.54
LINC00939-203ENST00000545784 ITGB5P18084 799 aa11.7□□□□□ -0.54
LINC00939-203ENST00000545784 CCND2P30279 289 aa11.7□□□□□ -0.54
LINC00939-203ENST00000545784 CBX1P83916 185 aa11.7□□□□□ -0.54
LINC00939-203ENST00000545784 NCBP1Q09161 790 aaKnown RBP11.7□□□□□ -0.54
LINC00939-203ENST00000545784 IQCB1Q15051 598 aa11.7□□□□□ -0.54
LINC00939-203ENST00000545784 LRRC8AQ8IWT6 810 aa11.7□□□□□ -0.54
LINC00939-203ENST00000545784 FBXO16Q8IX29 292 aaPredicted RBP11.7□□□□□ -0.54
LINC00939-203ENST00000545784 CEP57L1Q8IYX8 460 aa11.7□□□□□ -0.54
LINC00939-203ENST00000545784 CYP2W1Q8TAV3 490 aa11.7□□□□□ -0.54
LINC00939-203ENST00000545784 TBCKQ8TEA7 893 aa11.7□□□□□ -0.54
LINC00939-203ENST00000545784 ZNF333Q96JL9 665 aa11.7□□□□□ -0.54
LINC00939-203ENST00000545784 VTA1Q9NP79 307 aa11.7□□□□□ -0.54
LINC00939-203ENST00000545784 UBIAD1Q9Y5Z9 338 aa11.7□□□□□ -0.54
LINC00939-203ENST00000545784 CCND3P30281 292 aaPredicted RBP11.69□□□□□ -0.54
LINC00939-203ENST00000545784 CIITAP33076 1130 aa11.69□□□□□ -0.54
LINC00939-203ENST00000545784 USP11P51784 963 aa11.69□□□□□ -0.54
LINC00939-203ENST00000545784 FAM160A1Q05DH4 1040 aa11.69□□□□□ -0.54
LINC00939-203ENST00000545784 SEMA3FQ13275 785 aa11.69□□□□□ -0.54
LINC00939-203ENST00000545784 SAFBQ15424 915 aaKnown RBP eCLIP11.69□□□□□ -0.54
LINC00939-203ENST00000545784 TMEM63BQ5T3F8 832 aa11.69□□□□□ -0.54
LINC00939-203ENST00000545784 CEP135Q66GS9 1140 aa11.69□□□□□ -0.54
LINC00939-203ENST00000545784 PIK3AP1Q6ZUJ8 805 aa11.69□□□□□ -0.54
LINC00939-203ENST00000545784 EEPD1Q7L9B9 569 aa11.69□□□□□ -0.54
LINC00939-203ENST00000545784 INPP4AQ96PE3 977 aaPredicted RBP11.69□□□□□ -0.54
LINC00939-203ENST00000545784 MPHOSPH6Q99547 160 aaKnown RBP11.69□□□□□ -0.54
LINC00939-203ENST00000545784 BRMS1Q9HCU9 246 aa11.69□□□□□ -0.54
LINC00939-203ENST00000545784 RTEL1Q9NZ71 1219 aa11.69□□□□□ -0.54
LINC00939-203ENST00000545784 IMPACTQ9P2X3 320 aa11.69□□□□□ -0.54
LINC00939-203ENST00000545784 CYP3A7-CYP3A51PA0A087WV96 503 aa11.69□□□□□ -0.54
LINC00939-203ENST00000545784 MEIS1O00470 390 aa11.69□□□□□ -0.54
LINC00939-203ENST00000545784 NRDCO43847 1150 aa11.69□□□□□ -0.54
LINC00939-203ENST00000545784 STAM2O75886 525 aa11.69□□□□□ -0.54
LINC00939-203ENST00000545784 CYP3A7P24462 503 aa11.69□□□□□ -0.54
LINC00939-203ENST00000545784 LRMPQ12912 555 aa11.69□□□□□ -0.54
LINC00939-203ENST00000545784 NONOQ15233 471 aaKnown RBP eCLIP11.69□□□□□ -0.54
LINC00939-203ENST00000545784 MTFR1Q15390 333 aa11.69□□□□□ -0.54
LINC00939-203ENST00000545784 INF2Q27J81 1249 aa11.69□□□□□ -0.54
LINC00939-203ENST00000545784 CCDC62Q6P9F0 684 aa11.69□□□□□ -0.54
LINC00939-203ENST00000545784 NOSTRINQ8IVI9 506 aa11.69□□□□□ -0.54
LINC00939-203ENST00000545784 CACTINQ8WUQ7 758 aaKnown RBP11.69□□□□□ -0.54
LINC00939-203ENST00000545784 UNC93B1Q9H1C4 597 aa11.69□□□□□ -0.54
LINC00939-203ENST00000545784 EHMT1Q9H9B1 1298 aa11.69□□□□□ -0.54
LINC00939-203ENST00000545784 PLXNA1Q9UIW2 1896 aa11.69□□□□□ -0.54
LINC00939-203ENST00000545784 RBBP6Q7Z6E9 1792 aaKnown RBP11.68□□□□□ -0.54
LINC00939-203ENST00000545784 CCDC194A0A1B0GVG4 234 aa11.68□□□□□ -0.54
LINC00939-203ENST00000545784 SPATA31C2B4DYI2 1134 aa11.68□□□□□ -0.54
LINC00939-203ENST00000545784 FAM86B1E9PN63 330 aa11.68□□□□□ -0.54
LINC00939-203ENST00000545784 ADCY6O43306 1168 aa11.68□□□□□ -0.54
LINC00939-203ENST00000545784 FAM86B2P0C5J1 330 aa11.68□□□□□ -0.54
LINC00939-203ENST00000545784 ICAM3P32942 547 aa11.68□□□□□ -0.54
LINC00939-203ENST00000545784 GABPB1Q06547 395 aaPredicted RBP11.68□□□□□ -0.54
LINC00939-203ENST00000545784 PTPN14Q15678 1187 aa11.68□□□□□ -0.54
LINC00939-203ENST00000545784 CCDC144BQ3MJ40 725 aa11.68□□□□□ -0.54
LINC00939-203ENST00000545784 CEP55Q53EZ4 464 aa11.68□□□□□ -0.54
LINC00939-203ENST00000545784 LENG9Q96B70 501 aa11.68□□□□□ -0.54
LINC00939-203ENST00000545784 MBOAT7Q96N66 472 aa11.68□□□□□ -0.54
LINC00939-203ENST00000545784 MXRA8Q9BRK3 442 aa11.68□□□□□ -0.54
LINC00939-203ENST00000545784 JADE2Q9NQC1 790 aa11.68□□□□□ -0.54
LINC00939-203ENST00000545784 IGLV3-22A0A075B6J6 115 aa11.67□□□□□ -0.54
LINC00939-203ENST00000545784 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.67□□□□□ -0.54
LINC00939-203ENST00000545784 POTEFA5A3E0 1075 aa11.67□□□□□ -0.54
LINC00939-203ENST00000545784 WNT7AO00755 349 aa11.67□□□□□ -0.54
LINC00939-203ENST00000545784 SEPT4O43236 478 aa11.67□□□□□ -0.54
LINC00939-203ENST00000545784 ARIH2O95376 493 aa11.67□□□□□ -0.54
LINC00939-203ENST00000545784 SMPD1P17405 629 aa11.67□□□□□ -0.54
LINC00939-203ENST00000545784 SP2Q02086 613 aa11.67□□□□□ -0.54
LINC00939-203ENST00000545784 TAF3Q5VWG9 929 aa11.67□□□□□ -0.54
LINC00939-203ENST00000545784 LHX8Q68G74 356 aa11.67□□□□□ -0.54
LINC00939-203ENST00000545784 IQSEC1Q6DN90 963 aa11.67□□□□□ -0.54
LINC00939-203ENST00000545784 SEPT14Q6ZU15 432 aa11.67□□□□□ -0.54
LINC00939-203ENST00000545784 WDR11Q9BZH6 1224 aa11.67□□□□□ -0.54
LINC00939-203ENST00000545784 PAK6Q9NQU5 681 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms