RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 EPHA10Q5JZY3 1008 aa13.59□□□□□ -0.23
COL4A6-209ENST00000545689 SLC7A3Q8WY07 619 aa13.59□□□□□ -0.23
COL4A6-209ENST00000545689 FAN1Q9Y2M0 1017 aa13.59□□□□□ -0.23
COL4A6-209ENST00000545689 C2orf54Q08AI8 447 aa13.59□□□□□ -0.23
COL4A6-209ENST00000545689 FAM196AQ6ZSG2 479 aa13.59□□□□□ -0.23
COL4A6-209ENST00000545689 SMCR8Q8TEV9 937 aaPredicted RBP13.59□□□□□ -0.23
COL4A6-209ENST00000545689 MED10Q9BTT4 135 aa13.59□□□□□ -0.23
COL4A6-209ENST00000545689 SEPT9Q9UHD8 586 aaPredicted RBP13.59□□□□□ -0.23
COL4A6-209ENST00000545689 SNCBQ16143 134 aa13.59□□□□□ -0.23
COL4A6-209ENST00000545689 LY9Q9HBG7 655 aa13.59□□□□□ -0.23
COL4A6-209ENST00000545689 ADD3Q9UEY8 706 aaKnown RBP13.59□□□□□ -0.23
COL4A6-209ENST00000545689 TACC3Q9Y6A5 838 aa13.59□□□□□ -0.23
COL4A6-209ENST00000545689 SCYL2Q6P3W7 929 aa13.59□□□□□ -0.23
COL4A6-209ENST00000545689 ARHGEF18Q6ZSZ5 1173 aa13.59□□□□□ -0.23
COL4A6-209ENST00000545689 PROCA1Q8NCQ7 364 aaPredicted RBP13.59□□□□□ -0.23
COL4A6-209ENST00000545689 SPC25Q9HBM1 224 aa13.59□□□□□ -0.23
COL4A6-209ENST00000545689 PTPRUQ92729 1446 aa13.59□□□□□ -0.23
COL4A6-209ENST00000545689 POLR1AO95602 1720 aaPredicted RBP13.59□□□□□ -0.23
COL4A6-209ENST00000545689 HMGB1P1B2RPK0 211 aaPredicted RBP13.58□□□□□ -0.23
COL4A6-209ENST00000545689 CYP27B1O15528 508 aa13.58□□□□□ -0.23
COL4A6-209ENST00000545689 SGO2Q562F6 1265 aa13.58□□□□□ -0.23
COL4A6-209ENST00000545689 ANO3Q9BYT9 981 aa13.58□□□□□ -0.23
COL4A6-209ENST00000545689 TNS3Q68CZ2 1445 aa13.58□□□□□ -0.24
COL4A6-209ENST00000545689 A6NJR5 290 aa13.58□□□□□ -0.24
COL4A6-209ENST00000545689 PLEKHA8P1O95397 391 aa13.58□□□□□ -0.24
COL4A6-209ENST00000545689 CYP2E1P05181 493 aaPredicted RBP13.58□□□□□ -0.24
COL4A6-209ENST00000545689 COA7Q96BR5 231 aa13.58□□□□□ -0.24
COL4A6-209ENST00000545689 ISCA1Q9BUE6 129 aa13.58□□□□□ -0.24
COL4A6-209ENST00000545689 GOLPH3LQ9H4A5 285 aa13.58□□□□□ -0.24
COL4A6-209ENST00000545689 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.58□□□□□ -0.24
COL4A6-209ENST00000545689 TSPOAP1O95153 1857 aa13.58□□□□□ -0.24
COL4A6-209ENST00000545689 PFDN6O15212 129 aa13.58□□□□□ -0.24
COL4A6-209ENST00000545689 SGMS1Q86VZ5 419 aa13.58□□□□□ -0.24
COL4A6-209ENST00000545689 AIFM3Q96NN9 605 aa13.58□□□□□ -0.24
COL4A6-209ENST00000545689 MMS19Q96T76 1030 aa13.58□□□□□ -0.24
COL4A6-209ENST00000545689 TUBB6Q9BUF5 446 aa13.58□□□□□ -0.24
COL4A6-209ENST00000545689 KIF3CO14782 793 aa13.58□□□□□ -0.24
COL4A6-209ENST00000545689 TLR3O15455 904 aaKnown RBP13.58□□□□□ -0.24
COL4A6-209ENST00000545689 SART1O43290 800 aaKnown RBP13.58□□□□□ -0.24
COL4A6-209ENST00000545689 TMEM179Q6ZVK1 233 aa13.58□□□□□ -0.24
COL4A6-209ENST00000545689 RPUSD2Q8IZ73 545 aaKnown RBP13.58□□□□□ -0.24
COL4A6-209ENST00000545689 Q9H521 79 aa13.58□□□□□ -0.24
COL4A6-209ENST00000545689 KIAA1210Q9ULL0 1709 aa13.58□□□□□ -0.24
COL4A6-209ENST00000545689 PNPLA7Q6ZV29 1317 aa13.58□□□□□ -0.24
COL4A6-209ENST00000545689 NPR1P16066 1061 aa13.58□□□□□ -0.24
COL4A6-209ENST00000545689 GRM4Q14833 912 aa13.58□□□□□ -0.24
COL4A6-209ENST00000545689 MUM1Q2TAK8 710 aa13.58□□□□□ -0.24
COL4A6-209ENST00000545689 USP17L2Q6R6M4 530 aa13.58□□□□□ -0.24
COL4A6-209ENST00000545689 ACTR5Q9H9F9 607 aaPredicted RBP13.58□□□□□ -0.24
COL4A6-209ENST00000545689 ABHD10Q9NUJ1 306 aa13.58□□□□□ -0.24
COL4A6-209ENST00000545689 ANKFY1Q9P2R3 1169 aa13.58□□□□□ -0.24
COL4A6-209ENST00000545689 CRB1P82279 1406 aa13.57□□□□□ -0.24
COL4A6-209ENST00000545689 PALM3A6NDB9 673 aaPredicted RBP13.57□□□□□ -0.24
COL4A6-209ENST00000545689 CAPN9O14815 690 aa13.57□□□□□ -0.24
COL4A6-209ENST00000545689 COBLO75128 1261 aa13.57□□□□□ -0.24
COL4A6-209ENST00000545689 ATP1A3P13637 1013 aa13.57□□□□□ -0.24
COL4A6-209ENST00000545689 CCT5P48643 541 aa13.57□□□□□ -0.24
COL4A6-209ENST00000545689 PFDN4Q9NQP4 134 aa13.57□□□□□ -0.24
COL4A6-209ENST00000545689 PRPSAP1Q14558 356 aa13.57□□□□□ -0.24
COL4A6-209ENST00000545689 CYB5R4Q7L1T6 521 aa13.57□□□□□ -0.24
COL4A6-209ENST00000545689 MAP2K2P36507 400 aa13.57□□□□□ -0.24
COL4A6-209ENST00000545689 CASP8Q14790 479 aa13.57□□□□□ -0.24
COL4A6-209ENST00000545689 DYNLL2Q96FJ2 89 aa13.57□□□□□ -0.24
COL4A6-209ENST00000545689 PPP1R12CQ9BZL4 782 aa13.57□□□□□ -0.24
COL4A6-209ENST00000545689 STK38LQ9Y2H1 464 aa13.57□□□□□ -0.24
COL4A6-209ENST00000545689 SH3BP5O60239 455 aa13.57□□□□□ -0.24
COL4A6-209ENST00000545689 PSAPP07602 524 aa13.57□□□□□ -0.24
COL4A6-209ENST00000545689 INHBAP08476 426 aa13.57□□□□□ -0.24
COL4A6-209ENST00000545689 DDIT3P35638 169 aa13.57□□□□□ -0.24
COL4A6-209ENST00000545689 MXI1P50539 228 aa13.57□□□□□ -0.24
COL4A6-209ENST00000545689 GABPAQ06546 454 aa13.57□□□□□ -0.24
COL4A6-209ENST00000545689 RFX6Q8HWS3 928 aa13.57□□□□□ -0.24
COL4A6-209ENST00000545689 NACA2Q9H009 215 aa13.57□□□□□ -0.24
COL4A6-209ENST00000545689 GFPT2O94808 682 aa13.57□□□□□ -0.24
COL4A6-209ENST00000545689 RUBCNQ92622 972 aa13.57□□□□□ -0.24
COL4A6-209ENST00000545689 PLA2G12BQ9BX93 195 aa13.57□□□□□ -0.24
COL4A6-209ENST00000545689 IPO11Q9UI26 975 aaKnown RBP13.57□□□□□ -0.24
COL4A6-209ENST00000545689 ANAPC5Q9UJX4 755 aa13.57□□□□□ -0.24
COL4A6-209ENST00000545689 RPS6KA4O75676 772 aa13.56□□□□□ -0.24
COL4A6-209ENST00000545689 RABL6Q3YEC7 729 aaPredicted RBP13.56□□□□□ -0.24
COL4A6-209ENST00000545689 NEK9Q8TD19 979 aa13.56□□□□□ -0.24
COL4A6-209ENST00000545689 PAGR1Q9BTK6 254 aa13.56□□□□□ -0.24
COL4A6-209ENST00000545689 VPS41P49754 854 aa13.56□□□□□ -0.24
COL4A6-209ENST00000545689 ADAT2Q7Z6V5 191 aaKnown RBP13.56□□□□□ -0.24
COL4A6-209ENST00000545689 RRP15Q9Y3B9 282 aaKnown RBP13.56□□□□□ -0.24
COL4A6-209ENST00000545689 RIPOR2Q9Y4F9 1068 aa13.56□□□□□ -0.24
COL4A6-209ENST00000545689 A0A087WUV0 522 aaPredicted RBP13.56□□□□□ -0.24
COL4A6-209ENST00000545689 MIF4GDA9UHW6 222 aaKnown RBP13.56□□□□□ -0.24
COL4A6-209ENST00000545689 H7C0C1 242 aa13.56□□□□□ -0.24
COL4A6-209ENST00000545689 SLC16A2P36021 539 aa13.56□□□□□ -0.24
COL4A6-209ENST00000545689 ATP5OP48047 213 aa13.56□□□□□ -0.24
COL4A6-209ENST00000545689 JAK3P52333 1124 aa13.56□□□□□ -0.24
COL4A6-209ENST00000545689 TRIM28Q13263 835 aaKnown RBP13.56□□□□□ -0.24
COL4A6-209ENST00000545689 RAD54LQ92698 747 aa13.56□□□□□ -0.24
COL4A6-209ENST00000545689 USP17L3A6NCW0 530 aa13.56□□□□□ -0.24
COL4A6-209ENST00000545689 USP17L4A6NCW7 530 aa13.56□□□□□ -0.24
COL4A6-209ENST00000545689 CUL4BQ13620 913 aa13.56□□□□□ -0.24
COL4A6-209ENST00000545689 USP17L1Q7RTZ2 530 aa13.56□□□□□ -0.24
COL4A6-209ENST00000545689 UBE2TQ9NPD8 197 aaPredicted RBP13.56□□□□□ -0.24
COL4A6-209ENST00000545689 IQSEC2Q5JU85 1478 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms