RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 ZNF287Q9HBT7 754 aa18.19■□□□□ 0.5
CLSTN3-216ENST00000545663 IL17RBQ9NRM6 502 aa18.19■□□□□ 0.5
CLSTN3-216ENST00000545663 RWDD3Q9Y3V2 267 aa18.19■□□□□ 0.5
CLSTN3-216ENST00000545663 SPTBN2O15020 2390 aa18.19■□□□□ 0.5
CLSTN3-216ENST00000545663 ATF7P17544 494 aaPredicted RBP18.18■□□□□ 0.5
CLSTN3-216ENST00000545663 ATP5JP18859 108 aa18.18■□□□□ 0.5
CLSTN3-216ENST00000545663 TDO2P48775 406 aa18.18■□□□□ 0.5
CLSTN3-216ENST00000545663 BTG3Q14201 252 aaPredicted RBP18.18■□□□□ 0.5
CLSTN3-216ENST00000545663 SYDE2Q5VT97 1194 aa18.18■□□□□ 0.5
CLSTN3-216ENST00000545663 DDX41Q9UJV9 622 aaKnown RBP18.18■□□□□ 0.5
CLSTN3-216ENST00000545663 TREHO43280 583 aa18.17■□□□□ 0.5
CLSTN3-216ENST00000545663 KLHL23Q8NBE8 558 aa18.17■□□□□ 0.5
CLSTN3-216ENST00000545663 KCNG4Q8TDN1 519 aa18.17■□□□□ 0.5
CLSTN3-216ENST00000545663 TBC1D5Q92609 795 aa18.17■□□□□ 0.5
CLSTN3-216ENST00000545663 ATP6V0A1Q93050 837 aa18.17■□□□□ 0.5
CLSTN3-216ENST00000545663 PPP2R3CQ969Q6 453 aa18.17■□□□□ 0.5
CLSTN3-216ENST00000545663 OSBP2Q969R2 916 aa18.17■□□□□ 0.5
CLSTN3-216ENST00000545663 APOL5Q9BWW9 433 aa18.17■□□□□ 0.5
CLSTN3-216ENST00000545663 GPCPD1Q9NPB8 672 aa18.17■□□□□ 0.5
CLSTN3-216ENST00000545663 MRPL42Q9Y6G3 142 aaKnown RBP18.17■□□□□ 0.5
CLSTN3-216ENST00000545663 APPP05067 770 aa18.16■□□□□ 0.5
CLSTN3-216ENST00000545663 PUM1Q14671 1186 aaKnown RBP eCLIP18.16■□□□□ 0.5
CLSTN3-216ENST00000545663 PPTC7Q8NI37 304 aa18.16■□□□□ 0.5
CLSTN3-216ENST00000545663 POF1BQ8WVV4 589 aa18.16■□□□□ 0.5
CLSTN3-216ENST00000545663 ZNF689Q96CS4 500 aaPredicted RBP18.16■□□□□ 0.5
CLSTN3-216ENST00000545663 TAAR1Q96RJ0 339 aa18.16■□□□□ 0.5
CLSTN3-216ENST00000545663 PLVAPQ9BX97 442 aa18.16■□□□□ 0.5
CLSTN3-216ENST00000545663 TLE6Q9H808 572 aa18.16■□□□□ 0.5
CLSTN3-216ENST00000545663 CDH22Q9UJ99 828 aa18.16■□□□□ 0.5
CLSTN3-216ENST00000545663 ATRXP46100 2492 aa18.16■□□□□ 0.5
CLSTN3-216ENST00000545663 MAP1BP46821 2468 aaKnown RBP18.16■□□□□ 0.5
CLSTN3-216ENST00000545663 FRMPD2Q68DX3 1309 aaPredicted RBP18.16■□□□□ 0.5
CLSTN3-216ENST00000545663 PI15O43692 258 aa18.15■□□□□ 0.5
CLSTN3-216ENST00000545663 PPFIA3O75145 1194 aa18.15■□□□□ 0.5
CLSTN3-216ENST00000545663 BTNL9Q6UXG8 535 aa18.15■□□□□ 0.5
CLSTN3-216ENST00000545663 ATP8B4Q8TF62 1192 aa18.15■□□□□ 0.5
CLSTN3-216ENST00000545663 EMID1Q96A84 441 aaPredicted RBP18.15■□□□□ 0.5
CLSTN3-216ENST00000545663 S1PR5Q9H228 398 aa18.15■□□□□ 0.5
CLSTN3-216ENST00000545663 TSHZ2Q9NRE2 1034 aa18.15■□□□□ 0.5
CLSTN3-216ENST00000545663 RALYQ9UKM9 306 aaKnown RBP18.15■□□□□ 0.5
CLSTN3-216ENST00000545663 USP24Q9UPU5 2620 aa18.15■□□□□ 0.5
CLSTN3-216ENST00000545663 C17orf102A2RUQ5 167 aa18.14■□□□□ 0.49
CLSTN3-216ENST00000545663 B4DLN1 442 aa18.14■□□□□ 0.49
CLSTN3-216ENST00000545663 ENPP3O14638 875 aa18.14■□□□□ 0.49
CLSTN3-216ENST00000545663 MRPL12P52815 198 aaKnown RBP18.14■□□□□ 0.49
CLSTN3-216ENST00000545663 LAMC2Q13753 1193 aa18.14■□□□□ 0.49
CLSTN3-216ENST00000545663 ZSCAN25Q6NSZ9 544 aa18.14■□□□□ 0.49
CLSTN3-216ENST00000545663 P2RX5Q93086 422 aa18.14■□□□□ 0.49
CLSTN3-216ENST00000545663 COL20A1Q9P218 1284 aa18.14■□□□□ 0.49
CLSTN3-216ENST00000545663 DGKIO75912 1065 aa18.13■□□□□ 0.49
CLSTN3-216ENST00000545663 RLBP1P12271 317 aa18.13■□□□□ 0.49
CLSTN3-216ENST00000545663 MTMR3Q13615 1198 aa18.13■□□□□ 0.49
CLSTN3-216ENST00000545663 HSDL1Q3SXM5 330 aa18.13■□□□□ 0.49
CLSTN3-216ENST00000545663 ITPRIPQ8IWB1 547 aa18.13■□□□□ 0.49
CLSTN3-216ENST00000545663 UBALD2Q8IYN6 164 aa18.13■□□□□ 0.49
CLSTN3-216ENST00000545663 IFNL3Q8IZI9 196 aa18.13■□□□□ 0.49
CLSTN3-216ENST00000545663 MIER1Q8N108 512 aa18.13■□□□□ 0.49
CLSTN3-216ENST00000545663 DCAF4Q8WV16 495 aa18.13■□□□□ 0.49
CLSTN3-216ENST00000545663 APBB2Q92870 758 aa18.13■□□□□ 0.49
CLSTN3-216ENST00000545663 C16orf70Q9BSU1 422 aa18.13■□□□□ 0.49
CLSTN3-216ENST00000545663 DLL3Q9NYJ7 618 aa18.13■□□□□ 0.49
CLSTN3-216ENST00000545663 SORCS3Q9UPU3 1222 aa18.13■□□□□ 0.49
CLSTN3-216ENST00000545663 M0R2C6 588 aa18.12■□□□□ 0.49
CLSTN3-216ENST00000545663 GPAA1O43292 621 aa18.12■□□□□ 0.49
CLSTN3-216ENST00000545663 PPFIA4O75335 1185 aa18.12■□□□□ 0.49
CLSTN3-216ENST00000545663 SMIM10L2AP0DMW4 78 aa18.12■□□□□ 0.49
CLSTN3-216ENST00000545663 SMIM10L2BP0DMW5 78 aa18.12■□□□□ 0.49
CLSTN3-216ENST00000545663 HOXD8P13378 290 aaPredicted RBP18.12■□□□□ 0.49
CLSTN3-216ENST00000545663 HOXC8P31273 242 aa18.12■□□□□ 0.49
CLSTN3-216ENST00000545663 CLCN5P51795 746 aa18.12■□□□□ 0.49
CLSTN3-216ENST00000545663 ANGPT1Q15389 498 aa18.12■□□□□ 0.49
CLSTN3-216ENST00000545663 USH1GQ495M9 461 aa18.12■□□□□ 0.49
CLSTN3-216ENST00000545663 HSP90AB4PQ58FF6 505 aa18.12■□□□□ 0.49
CLSTN3-216ENST00000545663 ZKSCAN2Q63HK3 967 aa18.12■□□□□ 0.49
CLSTN3-216ENST00000545663 MICAL1Q8TDZ2 1067 aa18.12■□□□□ 0.49
CLSTN3-216ENST00000545663 KIF1BPQ96EK5 621 aa18.12■□□□□ 0.49
CLSTN3-216ENST00000545663 MFSD1Q9H3U5 465 aa18.12■□□□□ 0.49
CLSTN3-216ENST00000545663 RNPEPQ9H4A4 650 aa18.12■□□□□ 0.49
CLSTN3-216ENST00000545663 SUPT16HQ9Y5B9 1047 aaKnown RBP18.12■□□□□ 0.49
CLSTN3-216ENST00000545663 MYO10Q9HD67 2058 aa18.11■□□□□ 0.49
CLSTN3-216ENST00000545663 ASGR2P07307 311 aa18.11■□□□□ 0.49
CLSTN3-216ENST00000545663 GHRP10912 638 aa18.11■□□□□ 0.49
CLSTN3-216ENST00000545663 STXBP2Q15833 593 aa18.11■□□□□ 0.49
CLSTN3-216ENST00000545663 CWF19L1Q69YN2 538 aaKnown RBP18.11■□□□□ 0.49
CLSTN3-216ENST00000545663 FLCNQ8NFG4 579 aa18.11■□□□□ 0.49
CLSTN3-216ENST00000545663 SYTL5Q8TDW5 730 aaPredicted RBP18.11■□□□□ 0.49
CLSTN3-216ENST00000545663 NEK1Q96PY6 1258 aa18.11■□□□□ 0.49
CLSTN3-216ENST00000545663 MRVI1Q9Y6F6 885 aa18.11■□□□□ 0.49
CLSTN3-216ENST00000545663 MYH7P12883 1935 aa18.11■□□□□ 0.49
CLSTN3-216ENST00000545663 C2CD4DB7Z1M9 353 aa18.1■□□□□ 0.49
CLSTN3-216ENST00000545663 LMNAP02545 664 aaKnown RBP18.1■□□□□ 0.49
CLSTN3-216ENST00000545663 CHRNA1P02708 482 aa18.1■□□□□ 0.49
CLSTN3-216ENST00000545663 ST3GAL2Q16842 350 aa18.1■□□□□ 0.49
CLSTN3-216ENST00000545663 PAN2Q504Q3 1202 aaKnown RBP18.1■□□□□ 0.49
CLSTN3-216ENST00000545663 MYSM1Q5VVJ2 828 aa18.1■□□□□ 0.49
CLSTN3-216ENST00000545663 SYCE2Q6PIF2 218 aa18.1■□□□□ 0.49
CLSTN3-216ENST00000545663 DCLK2Q8N568 766 aa18.1■□□□□ 0.49
CLSTN3-216ENST00000545663 NSUN6Q8TEA1 469 aaKnown RBP18.1■□□□□ 0.49
CLSTN3-216ENST00000545663 SPATA33Q96N06 139 aa18.1■□□□□ 0.49
CLSTN3-216ENST00000545663 SETD4Q9NVD3 440 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms