RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 U2AF2P26368 475 aaKnown RBP eCLIP13.49□□□□□ -0.25
LTBR-214ENST00000545445 CDK7P50613 346 aa13.49□□□□□ -0.25
LTBR-214ENST00000545445 ALDH5A1P51649 535 aaPredicted RBP13.49□□□□□ -0.25
LTBR-214ENST00000545445 FOSBP53539 338 aa13.49□□□□□ -0.25
LTBR-214ENST00000545445 GUCY1B3Q02153 619 aa13.49□□□□□ -0.25
LTBR-214ENST00000545445 CNTN2Q02246 1040 aa13.49□□□□□ -0.25
LTBR-214ENST00000545445 ARHGEF16Q5VV41 709 aa13.49□□□□□ -0.25
LTBR-214ENST00000545445 JAKMIP3Q5VZ66 844 aa13.49□□□□□ -0.25
LTBR-214ENST00000545445 MAMDC4Q6UXC1 1216 aa13.49□□□□□ -0.25
LTBR-214ENST00000545445 FAM126BQ8IXS8 530 aa13.49□□□□□ -0.25
LTBR-214ENST00000545445 HERVK_113Q902F9 699 aa13.49□□□□□ -0.25
LTBR-214ENST00000545445 VTI1AQ96AJ9 217 aa13.49□□□□□ -0.25
LTBR-214ENST00000545445 IPO9Q96P70 1041 aaKnown RBP13.49□□□□□ -0.25
LTBR-214ENST00000545445 TAAR1Q96RJ0 339 aa13.49□□□□□ -0.25
LTBR-214ENST00000545445 ANO3Q9BYT9 981 aa13.49□□□□□ -0.25
LTBR-214ENST00000545445 TSPYL2Q9H2G4 693 aaPredicted RBP13.49□□□□□ -0.25
LTBR-214ENST00000545445 SLC28A3Q9HAS3 691 aa13.49□□□□□ -0.25
LTBR-214ENST00000545445 IL23AQ9NPF7 189 aa13.49□□□□□ -0.25
LTBR-214ENST00000545445 PXMP2Q9NR77 195 aa13.49□□□□□ -0.25
LTBR-214ENST00000545445 COL20A1Q9P218 1284 aa13.49□□□□□ -0.25
LTBR-214ENST00000545445 FAM184BQ9ULE4 1060 aa13.49□□□□□ -0.25
LTBR-214ENST00000545445 ELP1O95163 1332 aa13.48□□□□□ -0.25
LTBR-214ENST00000545445 SYNGAP1Q96PV0 1343 aa13.48□□□□□ -0.25
LTBR-214ENST00000545445 VPS37CA5D8V6 355 aaPredicted RBP13.48□□□□□ -0.25
LTBR-214ENST00000545445 SOWAHBA6NEL2 793 aa13.48□□□□□ -0.25
LTBR-214ENST00000545445 BTBD18B2RXH4 712 aa13.48□□□□□ -0.25
LTBR-214ENST00000545445 ADCY6O43306 1168 aa13.48□□□□□ -0.25
LTBR-214ENST00000545445 STAM2O75886 525 aa13.48□□□□□ -0.25
LTBR-214ENST00000545445 SNAI1O95863 264 aaPredicted RBP13.48□□□□□ -0.25
LTBR-214ENST00000545445 ASGR1P07306 291 aa13.48□□□□□ -0.25
LTBR-214ENST00000545445 C6orf222P0C671 652 aaPredicted RBP13.48□□□□□ -0.25
LTBR-214ENST00000545445 SREBF1P36956 1147 aa13.48□□□□□ -0.25
LTBR-214ENST00000545445 RABGGTBP53611 331 aa13.48□□□□□ -0.25
LTBR-214ENST00000545445 NONOQ15233 471 aaKnown RBP eCLIP13.48□□□□□ -0.25
LTBR-214ENST00000545445 SKIV2LQ15477 1246 aaKnown RBP13.48□□□□□ -0.25
LTBR-214ENST00000545445 MORC4Q8TE76 937 aa13.48□□□□□ -0.25
LTBR-214ENST00000545445 NAP1L4Q99733 375 aaKnown RBP13.48□□□□□ -0.25
LTBR-214ENST00000545445 PDCD2LQ9BRP1 358 aa13.48□□□□□ -0.25
LTBR-214ENST00000545445 LRFN3Q9BTN0 628 aa13.48□□□□□ -0.25
LTBR-214ENST00000545445 EPHX3Q9H6B9 360 aa13.48□□□□□ -0.25
LTBR-214ENST00000545445 HCN4Q9Y3Q4 1203 aa13.48□□□□□ -0.25
LTBR-214ENST00000545445 UMODL1Q5DID0 1318 aa13.47□□□□□ -0.25
LTBR-214ENST00000545445 A0A0U1RQG5 324 aaPredicted RBP13.47□□□□□ -0.25
LTBR-214ENST00000545445 ARVCFO00192 962 aa13.47□□□□□ -0.25
LTBR-214ENST00000545445 DUSP11O75319 330 aaKnown RBP13.47□□□□□ -0.25
LTBR-214ENST00000545445 NR3C2P08235 984 aa13.47□□□□□ -0.25
LTBR-214ENST00000545445 CYP3A4P08684 503 aa13.47□□□□□ -0.25
LTBR-214ENST00000545445 MYOGP15173 224 aa13.47□□□□□ -0.25
LTBR-214ENST00000545445 EDNRBP24530 442 aa13.47□□□□□ -0.25
LTBR-214ENST00000545445 CST5P28325 142 aaPredicted RBP13.47□□□□□ -0.25
LTBR-214ENST00000545445 CCND2P30279 289 aa13.47□□□□□ -0.25
LTBR-214ENST00000545445 USP11P51784 963 aa13.47□□□□□ -0.25
LTBR-214ENST00000545445 PDE4DQ08499 809 aa13.47□□□□□ -0.25
LTBR-214ENST00000545445 NR5A1Q13285 461 aa13.47□□□□□ -0.25
LTBR-214ENST00000545445 PGM5Q15124 567 aa13.47□□□□□ -0.25
LTBR-214ENST00000545445 STXBP2Q15833 593 aa13.47□□□□□ -0.25
LTBR-214ENST00000545445 PCNX4Q63HM2 1172 aa13.47□□□□□ -0.25
LTBR-214ENST00000545445 PPP2R2DQ66LE6 453 aa13.47□□□□□ -0.25
LTBR-214ENST00000545445 MCTP1Q6DN14 999 aa13.47□□□□□ -0.25
LTBR-214ENST00000545445 OTOP2Q7RTS6 562 aa13.47□□□□□ -0.25
LTBR-214ENST00000545445 BRAPQ7Z569 592 aa13.47□□□□□ -0.25
LTBR-214ENST00000545445 NOSTRINQ8IVI9 506 aa13.47□□□□□ -0.25
LTBR-214ENST00000545445 RASGRP4Q8TDF6 673 aa13.47□□□□□ -0.25
LTBR-214ENST00000545445 OXER1Q8TDS5 423 aa13.47□□□□□ -0.25
LTBR-214ENST00000545445 TNFRSF25Q93038 417 aa13.47□□□□□ -0.25
LTBR-214ENST00000545445 FGD4Q96M96 766 aa13.47□□□□□ -0.25
LTBR-214ENST00000545445 MTIF3Q9H2K0 278 aaKnown RBP13.47□□□□□ -0.25
LTBR-214ENST00000545445 ZSCAN16Q9H4T2 348 aaPredicted RBP13.47□□□□□ -0.25
LTBR-214ENST00000545445 TMEM260Q9NX78 707 aa13.47□□□□□ -0.25
LTBR-214ENST00000545445 MTMR6Q9Y217 621 aa13.47□□□□□ -0.25
LTBR-214ENST00000545445 TLR3O15455 904 aaKnown RBP13.46□□□□□ -0.25
LTBR-214ENST00000545445 EIF3JO75822 258 aaKnown RBP13.46□□□□□ -0.25
LTBR-214ENST00000545445 FGBP02675 491 aa13.46□□□□□ -0.25
LTBR-214ENST00000545445 EIF2AK2P19525 551 aaKnown RBP13.46□□□□□ -0.25
LTBR-214ENST00000545445 TRAPPC10P48553 1259 aa13.46□□□□□ -0.25
LTBR-214ENST00000545445 NUCB2P80303 420 aa13.46□□□□□ -0.25
LTBR-214ENST00000545445 ARHGAP4P98171 946 aa13.46□□□□□ -0.25
LTBR-214ENST00000545445 PIK3AP1Q6ZUJ8 805 aa13.46□□□□□ -0.25
LTBR-214ENST00000545445 VSIG10LQ86VR7 867 aa13.46□□□□□ -0.25
LTBR-214ENST00000545445 PCSK9Q8NBP7 692 aaKnown RBP13.46□□□□□ -0.25
LTBR-214ENST00000545445 TBCKQ8TEA7 893 aa13.46□□□□□ -0.25
LTBR-214ENST00000545445 CIZ1Q9ULV3 898 aaPredicted RBP13.46□□□□□ -0.25
LTBR-214ENST00000545445 NOL7Q9UMY1 257 aaKnown RBP13.46□□□□□ -0.25
LTBR-214ENST00000545445 ASTN1O14525 1302 aa13.45□□□□□ -0.26
LTBR-214ENST00000545445 ZNFX1Q9P2E3 1918 aaKnown RBP13.45□□□□□ -0.26
LTBR-214ENST00000545445 ADAMTS3O15072 1205 aa13.45□□□□□ -0.26
LTBR-214ENST00000545445 CD4P01730 458 aa13.45□□□□□ -0.26
LTBR-214ENST00000545445 ZSCAN22P10073 491 aaPredicted RBP13.45□□□□□ -0.26
LTBR-214ENST00000545445 GCFC2P16383 781 aaKnown RBP13.45□□□□□ -0.26
LTBR-214ENST00000545445 ACVR2BQ13705 512 aa13.45□□□□□ -0.26
LTBR-214ENST00000545445 AAK1Q2M2I8 961 aa13.45□□□□□ -0.26
LTBR-214ENST00000545445 GNASQ5JWF2 1037 aa13.45□□□□□ -0.26
LTBR-214ENST00000545445 MOXD1Q6UVY6 613 aa13.45□□□□□ -0.26
LTBR-214ENST00000545445 ARMCX2Q7L311 632 aa13.45□□□□□ -0.26
LTBR-214ENST00000545445 NEK8Q86SG6 692 aa13.45□□□□□ -0.26
LTBR-214ENST00000545445 CRYGNQ8WXF5 182 aa13.45□□□□□ -0.26
LTBR-214ENST00000545445 PURBQ96QR8 312 aaKnown RBP13.45□□□□□ -0.26
LTBR-214ENST00000545445 UPF3AQ9H1J1 476 aaKnown RBP13.45□□□□□ -0.26
LTBR-214ENST00000545445 ABHD16BQ9H3Z7 469 aa13.45□□□□□ -0.26
LTBR-214ENST00000545445 HIPK3Q9H422 1215 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms