RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 SLC39A5Q6ZMH5 540 aa8.51□□□□□ -1.05
CPSF7-224ENST00000544990 MICU3Q86XE3 530 aa8.51□□□□□ -1.05
CPSF7-224ENST00000544990 FBXO16Q8IX29 292 aaPredicted RBP8.51□□□□□ -1.05
CPSF7-224ENST00000544990 C7orf61Q8IZ16 206 aa8.51□□□□□ -1.05
CPSF7-224ENST00000544990 KLHDC9Q8NEP7 349 aa8.51□□□□□ -1.05
CPSF7-224ENST00000544990 SYTL5Q8TDW5 730 aaPredicted RBP8.51□□□□□ -1.05
CPSF7-224ENST00000544990 TBC1D5Q92609 795 aa8.51□□□□□ -1.05
CPSF7-224ENST00000544990 FERMT2Q96AC1 680 aa8.51□□□□□ -1.05
CPSF7-224ENST00000544990 TCEANC2Q96MN5 208 aa8.51□□□□□ -1.05
CPSF7-224ENST00000544990 JAKMIP1Q96N16 626 aaKnown RBP8.51□□□□□ -1.05
CPSF7-224ENST00000544990 TAAR1Q96RJ0 339 aa8.51□□□□□ -1.05
CPSF7-224ENST00000544990 IWS1Q96ST2 819 aa8.51□□□□□ -1.05
CPSF7-224ENST00000544990 RMDN3Q96TC7 470 aa8.51□□□□□ -1.05
CPSF7-224ENST00000544990 PHF24Q9UPV7 400 aa8.51□□□□□ -1.05
CPSF7-224ENST00000544990 SNX14Q9Y5W7 946 aa8.51□□□□□ -1.05
CPSF7-224ENST00000544990 ASTN1O14525 1302 aa8.51□□□□□ -1.05
CPSF7-224ENST00000544990 CCDC196A0A1B0GTZ2 297 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.5□□□□□ -1.05
CPSF7-224ENST00000544990 LRRC37A2A6NM11 1700 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 GCOM1H8Y6P7 765 aaPredicted RBP8.5□□□□□ -1.05
CPSF7-224ENST00000544990 NKRFO15226 690 aaKnown RBP eCLIP8.5□□□□□ -1.05
CPSF7-224ENST00000544990 DYNC1LI2O43237 492 aaPredicted RBP8.5□□□□□ -1.05
CPSF7-224ENST00000544990 ZBTB43O43298 467 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 PPP1R11O60927 126 aaPredicted RBP8.5□□□□□ -1.05
CPSF7-224ENST00000544990 POLR2MP0CAP2 368 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 SKIP12755 728 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 EDNRBP24530 442 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 HSD17B4P51659 736 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 RCAN1P53805 252 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 GHRHRQ02643 423 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 COL9A3Q14050 684 aaPredicted RBP8.5□□□□□ -1.05
CPSF7-224ENST00000544990 STXBP2Q15833 593 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 KCNA10Q16322 511 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 LRRC26Q2I0M4 334 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 SLC35G1Q2M3R5 365 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 LINC01559Q495D7 138 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 DUSP28Q4G0W2 176 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 TAPT1Q6NXT6 567 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 APOA5Q6Q788 366 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 TLK2Q86UE8 772 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 SPNS2Q8IVW8 549 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 SRBD1Q8N5C6 995 aaKnown RBP8.5□□□□□ -1.05
CPSF7-224ENST00000544990 SCFD2Q8WU76 684 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 PIBF1Q8WXW3 757 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 CUL5Q93034 780 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 VTI1AQ96AJ9 217 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 LENG1Q96BZ8 264 aaPredicted RBP8.5□□□□□ -1.05
CPSF7-224ENST00000544990 GLT1D1Q96MS3 346 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 USP26Q9BXU7 913 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 WDR11Q9BZH6 1224 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 UPF3AQ9H1J1 476 aaKnown RBP8.5□□□□□ -1.05
CPSF7-224ENST00000544990 STARD7Q9NQZ5 370 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 PDGFCQ9NRA1 345 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 PRKAG2Q9UGJ0 569 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 NAP1L2Q9ULW6 460 aaPredicted RBP8.5□□□□□ -1.05
CPSF7-224ENST00000544990 GNEQ9Y223 722 aaKnown RBP8.5□□□□□ -1.05
CPSF7-224ENST00000544990 KIAA1217Q5T5P2 1943 aa8.5□□□□□ -1.05
CPSF7-224ENST00000544990 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.49□□□□□ -1.05
CPSF7-224ENST00000544990 KLF18A0A0U1RQI7 1052 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 A0A1W2PQ45 241 aaPredicted RBP8.49□□□□□ -1.05
CPSF7-224ENST00000544990 A0A1W2PQY0 241 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 RBM47A0AV96 593 aaKnown RBP8.49□□□□□ -1.05
CPSF7-224ENST00000544990 GOLGA8AA7E2F4 631 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 GOLGA8BA8MQT2 603 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 ADCY6O43306 1168 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 CABYRO75952 493 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 PLEKHA8P1O95397 391 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 ASGR1P07306 291 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 NR3C2P08235 984 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 SMPD1P17405 629 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 EIF2AK2P19525 551 aaKnown RBP8.49□□□□□ -1.05
CPSF7-224ENST00000544990 CASTP20810 708 aaKnown RBP8.49□□□□□ -1.05
CPSF7-224ENST00000544990 RPS6KB1P23443 525 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 ACLYP53396 1101 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 RTP1P59025 263 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 NKX3-2P78367 333 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 TTLL4Q14679 1199 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 RTN1Q16799 776 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 BRDTQ58F21 947 aaPredicted RBP8.49□□□□□ -1.05
CPSF7-224ENST00000544990 C1orf53Q5VUE5 145 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 Q6ZUG5 572 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 TMTC3Q6ZXV5 915 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 RAB11FIP4Q86YS3 637 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 RNF135Q8IUD6 432 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 CMTR1Q8N1G2 835 aaKnown RBP8.49□□□□□ -1.05
CPSF7-224ENST00000544990 FBXL16Q8N461 479 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 ZNF511Q8NB15 262 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 UCN2Q96RP3 112 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 VRTNQ9H8Y1 702 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 PXMP2Q9NR77 195 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 ZMYND8Q9ULU4 1186 aaPredicted RBP8.49□□□□□ -1.05
CPSF7-224ENST00000544990 ATP11BQ9Y2G3 1177 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 MAFBQ9Y5Q3 323 aaPredicted RBP8.49□□□□□ -1.05
CPSF7-224ENST00000544990 DDX49Q9Y6V7 483 aaKnown RBP8.49□□□□□ -1.05
CPSF7-224ENST00000544990 ELP1O95163 1332 aa8.49□□□□□ -1.05
CPSF7-224ENST00000544990 MYADML2A6NDP7 307 aa8.48□□□□□ -1.05
CPSF7-224ENST00000544990 OPLAHO14841 1288 aa8.48□□□□□ -1.05
CPSF7-224ENST00000544990 EIF3JO75822 258 aaKnown RBP8.48□□□□□ -1.05
CPSF7-224ENST00000544990 TXNP10599 105 aaKnown RBP8.48□□□□□ -1.05
CPSF7-224ENST00000544990 CPA1P15085 419 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms