RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 GPR101Q96P66 508 aaPredicted RBP14.38□□□□□ -0.11
CPSF7-223ENST00000544669 AMNQ9BXJ7 453 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 ZCCHC17Q9NP64 241 aaKnown RBP14.38□□□□□ -0.11
CPSF7-223ENST00000544669 AIPL1Q9NZN9 384 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 DNM3Q9UQ16 869 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 MYH1P12882 1939 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 MYH8P13535 1937 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 FRMD3A2A2Y4 597 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 H3BQF6 201 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 POLRMTO00411 1230 aaKnown RBP14.38□□□□□ -0.11
CPSF7-223ENST00000544669 SLC1A4P43007 532 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 KLK7P49862 253 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 HNRNPH2P55795 449 aaKnown RBP14.38□□□□□ -0.11
CPSF7-223ENST00000544669 ALS2CLQ60I27 953 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 AMIGO3Q86WK7 504 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 CREG2Q8IUH2 290 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 ZDHHC15Q96MV8 337 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 OSBPL9Q96SU4 736 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 PLCB1Q9NQ66 1216 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 HDAC6Q9UBN7 1215 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 PCDHA1Q9Y5I3 950 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 CAPN2P17655 700 aa14.37□□□□□ -0.11
CPSF7-223ENST00000544669 MUTP22033 750 aa14.37□□□□□ -0.11
CPSF7-223ENST00000544669 EPHB4P54760 987 aa14.37□□□□□ -0.11
CPSF7-223ENST00000544669 ADAM9Q13443 819 aa14.37□□□□□ -0.11
CPSF7-223ENST00000544669 TDRD12Q587J7 1177 aaKnown RBP14.37□□□□□ -0.11
CPSF7-223ENST00000544669 FAM83BQ5T0W9 1011 aa14.37□□□□□ -0.11
CPSF7-223ENST00000544669 GBP6Q6ZN66 633 aa14.37□□□□□ -0.11
CPSF7-223ENST00000544669 TMEM179Q6ZVK1 233 aa14.37□□□□□ -0.11
CPSF7-223ENST00000544669 VPS36Q86VN1 386 aa14.37□□□□□ -0.11
CPSF7-223ENST00000544669 EIF1ADQ8N9N8 165 aaKnown RBP14.37□□□□□ -0.11
CPSF7-223ENST00000544669 SPATA4Q8NEY3 305 aa14.37□□□□□ -0.11
CPSF7-223ENST00000544669 FLAD1Q8NFF5 587 aa14.37□□□□□ -0.11
CPSF7-223ENST00000544669 CAPZA3Q96KX2 299 aa14.37□□□□□ -0.11
CPSF7-223ENST00000544669 ANO3Q9BYT9 981 aa14.37□□□□□ -0.11
CPSF7-223ENST00000544669 FBXL5Q9UKA1 691 aa14.37□□□□□ -0.11
CPSF7-223ENST00000544669 TRPC5Q9UL62 973 aaPredicted RBP14.37□□□□□ -0.11
CPSF7-223ENST00000544669 KIAA1024Q9UPX6 916 aa14.37□□□□□ -0.11
CPSF7-223ENST00000544669 TRAF3IP3Q9Y228 551 aa14.37□□□□□ -0.11
CPSF7-223ENST00000544669 FOCADQ5VW36 1801 aa14.37□□□□□ -0.11
CPSF7-223ENST00000544669 RCCD1A6NED2 376 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 SPDYE3A6NKU9 549 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 PDXKO00764 312 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 RPA1P27694 616 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 SLC18A3Q16572 532 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 CDC42EP5Q6NZY7 148 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 GPBP1Q86WP2 473 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 IFT20Q8IY31 132 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 GMCL1P1Q8NEA9 526 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 AFAP1L1Q8TED9 768 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 LMBR1Q8WVP7 490 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 IDI2Q9BXS1 227 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 HPCAL4Q9UM19 191 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 QSER1Q2KHR3 1735 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 USP17L10C9JJH3 530 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 GOLGA8KD6RF30 607 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 ZNF263O14978 683 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 SLC16A3O15427 465 aaKnown RBP14.36□□□□□ -0.11
CPSF7-223ENST00000544669 PPP1R12BO60237 982 aaPredicted RBP14.36□□□□□ -0.11
CPSF7-223ENST00000544669 GFPT2O94808 682 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 SSBP05455 408 aaKnown RBP eCLIP14.36□□□□□ -0.11
CPSF7-223ENST00000544669 GAP43P17677 238 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 NAP1L1P55209 391 aaKnown RBP14.36□□□□□ -0.11
CPSF7-223ENST00000544669 PPFIA1Q13136 1202 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 NAB2Q15742 525 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 CERKLQ49MI3 558 aaPredicted RBP14.36□□□□□ -0.11
CPSF7-223ENST00000544669 SLFN13Q68D06 897 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 STXBP4Q6ZWJ1 553 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 GMCL1Q96IK5 515 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 FAM107BQ9H098 131 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 FAN1Q9Y2M0 1017 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 LRRC37AA6NMS7 1700 aa14.36□□□□□ -0.11
CPSF7-223ENST00000544669 CDK5RAP2Q96SN8 1893 aa14.35□□□□□ -0.11
CPSF7-223ENST00000544669 LRRIQ3A6PVS8 624 aaPredicted RBP14.35□□□□□ -0.11
CPSF7-223ENST00000544669 UBAP1LF5GYI3 381 aa14.35□□□□□ -0.11
CPSF7-223ENST00000544669 EDIL3O43854 480 aa14.35□□□□□ -0.11
CPSF7-223ENST00000544669 SRGAP2O75044 1071 aa14.35□□□□□ -0.11
CPSF7-223ENST00000544669 CYP11B2P19099 503 aa14.35□□□□□ -0.11
CPSF7-223ENST00000544669 CIITAP33076 1130 aa14.35□□□□□ -0.11
CPSF7-223ENST00000544669 MMP14P50281 582 aa14.35□□□□□ -0.11
CPSF7-223ENST00000544669 ATP2B2Q01814 1243 aa14.35□□□□□ -0.11
CPSF7-223ENST00000544669 KCNMA1Q12791 1236 aa14.35□□□□□ -0.11
CPSF7-223ENST00000544669 ASIC2Q16515 512 aa14.35□□□□□ -0.11
CPSF7-223ENST00000544669 UBE2SQ16763 222 aa14.35□□□□□ -0.11
CPSF7-223ENST00000544669 QRICH1Q2TAL8 776 aa14.35□□□□□ -0.11
CPSF7-223ENST00000544669 SYT2Q8N9I0 419 aaPredicted RBP14.35□□□□□ -0.11
CPSF7-223ENST00000544669 HPS3Q969F9 1004 aa14.35□□□□□ -0.11
CPSF7-223ENST00000544669 SELENOOQ9BVL4 669 aa14.35□□□□□ -0.11
CPSF7-223ENST00000544669 EHMT1Q9H9B1 1298 aa14.35□□□□□ -0.11
CPSF7-223ENST00000544669 LRRC4BQ9NT99 713 aa14.35□□□□□ -0.11
CPSF7-223ENST00000544669 PCDHA2Q9Y5H9 948 aa14.35□□□□□ -0.11
CPSF7-223ENST00000544669 GOLGA6BA6NDN3 693 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 RIMBP2O15034 1052 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 PPP1R11O60927 126 aaPredicted RBP14.34□□□□□ -0.11
CPSF7-223ENST00000544669 MOCS3O95396 460 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 CCDC172P0C7W6 258 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 EIF6P56537 245 aaKnown RBP14.34□□□□□ -0.11
CPSF7-223ENST00000544669 KLHL30Q0D2K2 578 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 CDC37Q16543 378 aaPredicted RBP14.34□□□□□ -0.11
CPSF7-223ENST00000544669 KNOP1Q1ED39 458 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms