RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 SOBPA7XYQ1 873 aa4.97□□□□□ -1.61
SNHG1-220ENST00000544550 RFXAPO00287 272 aa4.97□□□□□ -1.61
SNHG1-220ENST00000544550 ZEB2O60315 1214 aa4.97□□□□□ -1.61
SNHG1-220ENST00000544550 MYOGP15173 224 aa4.97□□□□□ -1.61
SNHG1-220ENST00000544550 RFC2P35250 354 aa4.97□□□□□ -1.61
SNHG1-220ENST00000544550 JAG1P78504 1218 aa4.97□□□□□ -1.61
SNHG1-220ENST00000544550 GRB10Q13322 594 aa4.97□□□□□ -1.61
SNHG1-220ENST00000544550 DSC3Q14574 896 aa4.97□□□□□ -1.61
SNHG1-220ENST00000544550 ABCB5Q2M3G0 1257 aa4.97□□□□□ -1.61
SNHG1-220ENST00000544550 CERKLQ49MI3 558 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-220ENST00000544550 NAA16Q6N069 864 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-220ENST00000544550 TATDN1Q6P1N9 297 aa4.97□□□□□ -1.61
SNHG1-220ENST00000544550 NLRP8Q86W28 1048 aa4.97□□□□□ -1.61
SNHG1-220ENST00000544550 MAPKAPK5Q8IW41 473 aa4.97□□□□□ -1.61
SNHG1-220ENST00000544550 SPATA5Q8NB90 893 aa4.97□□□□□ -1.61
SNHG1-220ENST00000544550 GPR152Q8TDT2 470 aa4.97□□□□□ -1.61
SNHG1-220ENST00000544550 SH3RF3Q8TEJ3 882 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-220ENST00000544550 ALKBH8Q96BT7 664 aaKnown RBP4.97□□□□□ -1.61
SNHG1-220ENST00000544550 EHD4Q9H223 541 aa4.97□□□□□ -1.61
SNHG1-220ENST00000544550 RUBCNLQ9H714 662 aa4.97□□□□□ -1.61
SNHG1-220ENST00000544550 SH2D4AQ9H788 454 aa4.97□□□□□ -1.61
SNHG1-220ENST00000544550 CERS4Q9HA82 394 aa4.97□□□□□ -1.61
SNHG1-220ENST00000544550 GPAMQ9HCL2 828 aa4.97□□□□□ -1.61
SNHG1-220ENST00000544550 NEUROD4Q9HD90 331 aa4.97□□□□□ -1.61
SNHG1-220ENST00000544550 AATFQ9NY61 560 aaKnown RBP eCLIP4.97□□□□□ -1.611e-323■■■□□ 16.4
SNHG1-220ENST00000544550 LRP2BPQ9P2M1 347 aa4.97□□□□□ -1.61
SNHG1-220ENST00000544550 ZHX1Q9UKY1 873 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-220ENST00000544550 PALD1Q9ULE6 856 aa4.97□□□□□ -1.61
SNHG1-220ENST00000544550 DOCK3Q8IZD9 2030 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 EPOPA6NHQ4 379 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 GPR182O15218 404 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 FLOT1O75955 427 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 BAIAP3O94812 1187 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 RPLP1P05386 114 aaKnown RBP4.96□□□□□ -1.62
SNHG1-220ENST00000544550 SUPT20HL2P0C7V6 817 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 IL9P15248 144 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 ZNF16P17020 682 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-220ENST00000544550 TAL1P17542 331 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-220ENST00000544550 KCNA5P22460 613 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 ADORA1P30542 326 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 RBM25P49756 843 aaKnown RBP4.96□□□□□ -1.62
SNHG1-220ENST00000544550 ARSDP51689 593 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 CCL23P55773 120 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 GJA9P57773 515 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 PTSQ03393 145 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 TAP1Q03518 808 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 EXOSC9Q06265 439 aaKnown RBP4.96□□□□□ -1.62
SNHG1-220ENST00000544550 TYRO3Q06418 890 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 LBRQ14739 615 aaKnown RBP4.96□□□□□ -1.62
SNHG1-220ENST00000544550 SHROOM1Q2M3G4 852 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-220ENST00000544550 ZNF792Q3KQV3 632 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 GORABQ5T7V8 394 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 SAMD5Q5TGI4 173 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 KRT40Q6A162 431 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 MAMDC4Q6UXC1 1216 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 HFE2Q6ZVN8 426 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 TTC6Q86TZ1 520 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 KRTAP1-3Q8IUG1 177 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 SUGP1Q8IWZ8 645 aaKnown RBP4.96□□□□□ -1.62
SNHG1-220ENST00000544550 PGBD3Q8N328 593 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 SVOPQ8N4V2 548 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 SLC43A3Q8NBI5 491 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-220ENST00000544550 ZNF384Q8TF68 577 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 PIK3R5Q8WYR1 880 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 LENG1Q96BZ8 264 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-220ENST00000544550 POP1Q99575 1024 aaKnown RBP4.96□□□□□ -1.62
SNHG1-220ENST00000544550 NOC4LQ9BVI4 516 aaKnown RBP4.96□□□□□ -1.62
SNHG1-220ENST00000544550 UPF3AQ9H1J1 476 aaKnown RBP4.96□□□□□ -1.62
SNHG1-220ENST00000544550 ABHD16BQ9H3Z7 469 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 HMG20BQ9P0W2 317 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 CTNNA3Q9UI47 895 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 SERPINB13Q9UIV8 391 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 PTPRCP08575 1304 aa4.96□□□□□ -1.62
SNHG1-220ENST00000544550 KRTAP9-6A0A140TA67 174 aa4.95□□□□□ -1.62
SNHG1-220ENST00000544550 A0A1B0GUL7 405 aa4.95□□□□□ -1.62
SNHG1-220ENST00000544550 MYADML2A6NDP7 307 aa4.95□□□□□ -1.62
SNHG1-220ENST00000544550 LPXNO60711 386 aa4.95□□□□□ -1.62
SNHG1-220ENST00000544550 PGK2P07205 417 aa4.95□□□□□ -1.62
SNHG1-220ENST00000544550 P4HBP07237 508 aaKnown RBP4.95□□□□□ -1.62
SNHG1-220ENST00000544550 THBS1P07996 1170 aa4.95□□□□□ -1.62
SNHG1-220ENST00000544550 UQCRFS1P1P0C7P4 283 aa4.95□□□□□ -1.62
SNHG1-220ENST00000544550 PCSK2P16519 638 aa4.95□□□□□ -1.62
SNHG1-220ENST00000544550 GRNP28799 593 aaKnown RBP4.95□□□□□ -1.62
SNHG1-220ENST00000544550 TIMM10P62072 90 aa4.95□□□□□ -1.62
SNHG1-220ENST00000544550 NKX3-2P78367 333 aa4.95□□□□□ -1.62
SNHG1-220ENST00000544550 PLCB3Q01970 1234 aa4.95□□□□□ -1.62
SNHG1-220ENST00000544550 EHHADHQ08426 723 aa4.95□□□□□ -1.62
SNHG1-220ENST00000544550 ITGA7Q13683 1181 aa4.95□□□□□ -1.62
SNHG1-220ENST00000544550 ACVR2BQ13705 512 aa4.95□□□□□ -1.62
SNHG1-220ENST00000544550 UBAP2LQ14157 1087 aaKnown RBP4.95□□□□□ -1.62
SNHG1-220ENST00000544550 BMP8AQ7Z5Y6 402 aa4.95□□□□□ -1.62
SNHG1-220ENST00000544550 RIOX2Q8IUF8 465 aa4.95□□□□□ -1.62
SNHG1-220ENST00000544550 HERC6Q8IVU3 1022 aa4.95□□□□□ -1.62
SNHG1-220ENST00000544550 WDR63Q8IWG1 891 aa4.95□□□□□ -1.62
SNHG1-220ENST00000544550 ADHFE1Q8IWW8 467 aa4.95□□□□□ -1.62
SNHG1-220ENST00000544550 MAGEB6Q8N7X4 407 aa4.95□□□□□ -1.62
SNHG1-220ENST00000544550 PRSS33Q8NF86 280 aa4.95□□□□□ -1.62
SNHG1-220ENST00000544550 ACER1Q8TDN7 264 aa4.95□□□□□ -1.62
SNHG1-220ENST00000544550 ATG4CQ96DT6 458 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms