RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 PYM1Q9BRP8 204 aaKnown RBP12.01□□□□□ -0.49
DDB1-221ENST00000543162 PANK2Q9BZ23 570 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 ARHGAP39Q9C0H5 1083 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 SAGE1Q9NXZ1 904 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 CCDC39Q9UFE4 941 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 GJD2Q9UKL4 321 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 STK24Q9Y6E0 443 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 MCM3APO60318 1980 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 DDX39AO00148 427 aaKnown RBP12□□□□□ -0.49
DDB1-221ENST00000543162 DHX15O43143 795 aaKnown RBP12□□□□□ -0.49
DDB1-221ENST00000543162 CHMP2AO43633 222 aa12□□□□□ -0.49
DDB1-221ENST00000543162 ATP9AO75110 1047 aa12□□□□□ -0.49
DDB1-221ENST00000543162 TGFB3P10600 412 aa12□□□□□ -0.49
DDB1-221ENST00000543162 KCNA2P16389 499 aa12□□□□□ -0.49
DDB1-221ENST00000543162 CYP2B6P20813 491 aa12□□□□□ -0.49
DDB1-221ENST00000543162 CTGFP29279 349 aa12□□□□□ -0.49
DDB1-221ENST00000543162 MAP2K1Q02750 393 aaPredicted RBP12□□□□□ -0.49
DDB1-221ENST00000543162 KARSQ15046 597 aaKnown RBP12□□□□□ -0.49
DDB1-221ENST00000543162 ZRSR1Q15695 479 aaKnown RBP12□□□□□ -0.49
DDB1-221ENST00000543162 CCDC183Q5T5S1 534 aa12□□□□□ -0.49
DDB1-221ENST00000543162 KCNV1Q6PIU1 500 aa12□□□□□ -0.49
DDB1-221ENST00000543162 FBXO16Q8IX29 292 aaPredicted RBP12□□□□□ -0.49
DDB1-221ENST00000543162 IQUBQ8NA54 791 aa12□□□□□ -0.49
DDB1-221ENST00000543162 SNX29Q8TEQ0 813 aa12□□□□□ -0.49
DDB1-221ENST00000543162 DHX58Q96C10 678 aa12□□□□□ -0.49
DDB1-221ENST00000543162 CALML4Q96GE6 196 aa12□□□□□ -0.49
DDB1-221ENST00000543162 CDK5RAP3Q96JB5 506 aa12□□□□□ -0.49
DDB1-221ENST00000543162 APBA2Q99767 749 aa12□□□□□ -0.49
DDB1-221ENST00000543162 TINF2Q9BSI4 451 aa12□□□□□ -0.49
DDB1-221ENST00000543162 MMTAG2Q9BU76 263 aaKnown RBP12□□□□□ -0.49
DDB1-221ENST00000543162 BEGAINQ9BUH8 593 aa12□□□□□ -0.49
DDB1-221ENST00000543162 NUP62CLQ9H1M0 184 aa12□□□□□ -0.49
DDB1-221ENST00000543162 UNC45AQ9H3U1 944 aa12□□□□□ -0.49
DDB1-221ENST00000543162 CLSTN2Q9H4D0 955 aa12□□□□□ -0.49
DDB1-221ENST00000543162 VTA1Q9NP79 307 aa12□□□□□ -0.49
DDB1-221ENST00000543162 CDKN2AIPQ9NXV6 580 aaPredicted RBP12□□□□□ -0.49
DDB1-221ENST00000543162 TMEM63CQ9P1W3 806 aa12□□□□□ -0.49
DDB1-221ENST00000543162 USP25Q9UHP3 1055 aa12□□□□□ -0.49
DDB1-221ENST00000543162 SYNGAP1Q96PV0 1343 aa12□□□□□ -0.49
DDB1-221ENST00000543162 A0A087X0B3 334 aa11.99□□□□□ -0.49
DDB1-221ENST00000543162 GPR25O00155 361 aa11.99□□□□□ -0.49
DDB1-221ENST00000543162 SLC26A4O43511 780 aa11.99□□□□□ -0.49
DDB1-221ENST00000543162 CCT6AP40227 531 aaKnown RBP11.99□□□□□ -0.49
DDB1-221ENST00000543162 STAT6P42226 847 aa11.99□□□□□ -0.49
DDB1-221ENST00000543162 KRT76Q01546 638 aa11.99□□□□□ -0.49
DDB1-221ENST00000543162 LONRF3Q496Y0 759 aa11.99□□□□□ -0.49
DDB1-221ENST00000543162 RRAGBQ5VZM2 374 aa11.99□□□□□ -0.49
DDB1-221ENST00000543162 HAUS3Q68CZ6 603 aa11.99□□□□□ -0.49
DDB1-221ENST00000543162 MIER3Q7Z3K6 550 aa11.99□□□□□ -0.49
DDB1-221ENST00000543162 GIMAP8Q8ND71 665 aaPredicted RBP11.99□□□□□ -0.49
DDB1-221ENST00000543162 SCFD2Q8WU76 684 aa11.99□□□□□ -0.49
DDB1-221ENST00000543162 TIGD1Q96MW7 591 aa11.99□□□□□ -0.49
DDB1-221ENST00000543162 SENP7Q9BQF6 1050 aa11.99□□□□□ -0.49
DDB1-221ENST00000543162 GZF1Q9H116 711 aaPredicted RBP11.99□□□□□ -0.49
DDB1-221ENST00000543162 DISC1Q9NRI5 854 aa11.99□□□□□ -0.49
DDB1-221ENST00000543162 NFASCO94856 1347 aa11.99□□□□□ -0.49
DDB1-221ENST00000543162 KDM3AQ9Y4C1 1321 aa11.99□□□□□ -0.49
DDB1-221ENST00000543162 ZSWIM8A7E2V4 1837 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 EML1O00423 815 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 SNAI1O95863 264 aaPredicted RBP11.98□□□□□ -0.49
DDB1-221ENST00000543162 SLFN14P0C7P3 912 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 XRCC5P13010 732 aaKnown RBP11.98□□□□□ -0.49
DDB1-221ENST00000543162 PLCG1P19174 1290 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 HOXD10P28358 340 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 JAK3P52333 1124 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 SP2Q02086 613 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 NEDD9Q14511 834 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 TTLL4Q14679 1199 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 EPHA7Q15375 998 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 CAMK4Q16566 473 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 OLFML2BQ68BL8 750 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 ZNF746Q6NUN9 644 aaPredicted RBP11.98□□□□□ -0.49
DDB1-221ENST00000543162 B3GNT9Q6UX72 402 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 KRBA2Q6ZNG9 492 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 CEP57L1Q8IYX8 460 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 CNNM3Q8NE01 707 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 CD99L2Q8TCZ2 262 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 CCDC34Q96HJ3 373 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 PLIN2Q99541 437 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 EIF2AK1Q9BQI3 630 aaKnown RBP11.98□□□□□ -0.49
DDB1-221ENST00000543162 ANP32EQ9BTT0 268 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 NT5C3AQ9H0P0 336 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 TNMDQ9H2S6 317 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 ABHD16BQ9H3Z7 469 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 JPH1Q9HDC5 661 aaPredicted RBP11.98□□□□□ -0.49
DDB1-221ENST00000543162 SLC9A2Q9UBY0 812 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 SERTAD1Q9UHV2 236 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 HOOK1Q9UJC3 728 aaKnown RBP11.98□□□□□ -0.49
DDB1-221ENST00000543162 SAMM50Q9Y512 469 aa11.98□□□□□ -0.49
DDB1-221ENST00000543162 WDR64B1ANS9 1081 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 CTAGE5O15320 804 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 ACTN4O43707 911 aaKnown RBP11.97□□□□□ -0.49
DDB1-221ENST00000543162 FKTNO75072 461 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 MED24O75448 989 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 CCNE2O96020 404 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 TXNP10599 105 aaKnown RBP11.97□□□□□ -0.49
DDB1-221ENST00000543162 UBA1P22314 1058 aaKnown RBP11.97□□□□□ -0.49
DDB1-221ENST00000543162 RPA1P27694 616 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 SFNP31947 248 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 FLT3LGP49771 235 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms