RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 ADAMTS17Q8TE56 1095 aa7.49□□□□□ -1.21
XRCC4-206ENST00000542685 ZNF652Q9Y2D9 606 aa7.49□□□□□ -1.21
XRCC4-206ENST00000542685 NPFFR2Q9Y5X5 522 aa7.49□□□□□ -1.21
XRCC4-206ENST00000542685 DUSP10Q9Y6W6 482 aa7.49□□□□□ -1.21
XRCC4-206ENST00000542685 FHAD1B1AJZ9 1412 aa7.49□□□□□ -1.21
XRCC4-206ENST00000542685 SETD5Q9C0A6 1442 aa7.49□□□□□ -1.21
XRCC4-206ENST00000542685 POLR1AO95602 1720 aaPredicted RBP7.49□□□□□ -1.21
XRCC4-206ENST00000542685 LRRC9Q6ZRR7 1453 aa7.49□□□□□ -1.21
XRCC4-206ENST00000542685 DLX3O60479 287 aa7.48□□□□□ -1.21
XRCC4-206ENST00000542685 CNR2P34972 360 aa7.48□□□□□ -1.21
XRCC4-206ENST00000542685 NKX3-2P78367 333 aa7.48□□□□□ -1.21
XRCC4-206ENST00000542685 CR1LQ2VPA4 569 aa7.48□□□□□ -1.21
XRCC4-206ENST00000542685 ZFYVE27Q5T4F4 411 aa7.48□□□□□ -1.21
XRCC4-206ENST00000542685 THOC2Q8NI27 1593 aaKnown RBP7.48□□□□□ -1.21
XRCC4-206ENST00000542685 IPO4Q8TEX9 1081 aaKnown RBP7.48□□□□□ -1.21
XRCC4-206ENST00000542685 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.48□□□□□ -1.21
XRCC4-206ENST00000542685 EPB41L1Q9H4G0 881 aa7.48□□□□□ -1.21
XRCC4-206ENST00000542685 NGRNQ9NPE2 291 aaKnown RBP7.48□□□□□ -1.21
XRCC4-206ENST00000542685 PCDHB4Q9Y5E5 795 aa7.48□□□□□ -1.21
XRCC4-206ENST00000542685 WDR97A6NE52 1622 aa7.48□□□□□ -1.21
XRCC4-206ENST00000542685 RAB3GAP2Q9H2M9 1393 aa7.47□□□□□ -1.21
XRCC4-206ENST00000542685 MSCO60682 206 aa7.47□□□□□ -1.21
XRCC4-206ENST00000542685 RPL13P26373 211 aaKnown RBP7.47□□□□□ -1.21
XRCC4-206ENST00000542685 TOE1Q96GM8 510 aaKnown RBP7.47□□□□□ -1.21
XRCC4-206ENST00000542685 MAP7D2Q96T17 732 aa7.47□□□□□ -1.21
XRCC4-206ENST00000542685 PHF20Q9BVI0 1012 aa7.47□□□□□ -1.21
XRCC4-206ENST00000542685 JAM3Q9BX67 310 aa7.47□□□□□ -1.21
XRCC4-206ENST00000542685 KRTAP9-3Q9BYQ3 159 aa7.47□□□□□ -1.21
XRCC4-206ENST00000542685 LNPKQ9C0E8 428 aa7.47□□□□□ -1.21
XRCC4-206ENST00000542685 PDCL3Q9H2J4 239 aa7.47□□□□□ -1.21
XRCC4-206ENST00000542685 CFTRP13569 1480 aa7.47□□□□□ -1.21
XRCC4-206ENST00000542685 FYCO1Q9BQS8 1478 aa7.47□□□□□ -1.21
XRCC4-206ENST00000542685 ARID4BQ4LE39 1312 aaPredicted RBP7.47□□□□□ -1.21
XRCC4-206ENST00000542685 TCRBV5S2A0A599 114 aa7.46□□□□□ -1.22
XRCC4-206ENST00000542685 IQCA1LA6NCM1 817 aa7.46□□□□□ -1.22
XRCC4-206ENST00000542685 PRODHO43272 600 aa7.46□□□□□ -1.22
XRCC4-206ENST00000542685 TADA3O75528 432 aa7.46□□□□□ -1.22
XRCC4-206ENST00000542685 TPM2P07951 284 aa7.46□□□□□ -1.22
XRCC4-206ENST00000542685 RGL3Q3MIN7 710 aa7.46□□□□□ -1.22
XRCC4-206ENST00000542685 LCE5AQ5TCM9 118 aa7.46□□□□□ -1.22
XRCC4-206ENST00000542685 MCTP2Q6DN12 878 aa7.46□□□□□ -1.22
XRCC4-206ENST00000542685 SGSM3Q96HU1 749 aa7.46□□□□□ -1.22
XRCC4-206ENST00000542685 NAP1L5Q96NT1 182 aaPredicted RBP7.46□□□□□ -1.22
XRCC4-206ENST00000542685 AARSD1Q9BTE6 412 aaKnown RBP7.46□□□□□ -1.22
XRCC4-206ENST00000542685 KRTAP4-2Q9BYR5 136 aa7.46□□□□□ -1.22
XRCC4-206ENST00000542685 TRIM55Q9BYV6 548 aa7.46□□□□□ -1.22
XRCC4-206ENST00000542685 GPR27Q9NS67 375 aa7.46□□□□□ -1.22
XRCC4-206ENST00000542685 MYOTQ9UBF9 498 aa7.46□□□□□ -1.22
XRCC4-206ENST00000542685 PPARGC1AQ9UBK2 798 aaKnown RBP7.46□□□□□ -1.22
XRCC4-206ENST00000542685 CC2D2AQ9P2K1 1620 aa7.45□□□□□ -1.22
XRCC4-206ENST00000542685 E9PSI1 815 aa7.45□□□□□ -1.22
XRCC4-206ENST00000542685 DDX3XO00571 662 aaKnown RBP eCLIP7.45□□□□□ -1.22
XRCC4-206ENST00000542685 RAB33AQ14088 237 aa7.45□□□□□ -1.22
XRCC4-206ENST00000542685 EMC4Q5J8M3 183 aa7.45□□□□□ -1.22
XRCC4-206ENST00000542685 ZSWIM3Q96MP5 696 aa7.45□□□□□ -1.22
XRCC4-206ENST00000542685 CDIP1Q9H305 208 aa7.45□□□□□ -1.22
XRCC4-206ENST00000542685 ARHGEF4Q9NR80 690 aa7.45□□□□□ -1.22
XRCC4-206ENST00000542685 IGSF5Q9NSI5 407 aa7.45□□□□□ -1.22
XRCC4-206ENST00000542685 DTLQ9NZJ0 730 aa7.45□□□□□ -1.22
XRCC4-206ENST00000542685 PCF11O94913 1555 aaKnown RBP7.45□□□□□ -1.22
XRCC4-206ENST00000542685 CUL7Q14999 1698 aa7.44□□□□□ -1.22
XRCC4-206ENST00000542685 CTTNBP2Q8WZ74 1663 aa7.44□□□□□ -1.22
XRCC4-206ENST00000542685 ADAM9Q13443 819 aa7.44□□□□□ -1.22
XRCC4-206ENST00000542685 CNGB1Q14028 1251 aaPredicted RBP7.44□□□□□ -1.22
XRCC4-206ENST00000542685 PRAMEF18Q5VWM3 479 aa7.44□□□□□ -1.22
XRCC4-206ENST00000542685 TEPPQ6URK8 271 aa7.44□□□□□ -1.22
XRCC4-206ENST00000542685 KCNT2Q6UVM3 1135 aa7.44□□□□□ -1.22
XRCC4-206ENST00000542685 SMOC1Q9H4F8 434 aa7.44□□□□□ -1.22
XRCC4-206ENST00000542685 PRDM4Q9UKN5 801 aa7.44□□□□□ -1.22
XRCC4-206ENST00000542685 HECW1Q76N89 1606 aa7.44□□□□□ -1.22
XRCC4-206ENST00000542685 ABCA5Q8WWZ7 1642 aa7.44□□□□□ -1.22
XRCC4-206ENST00000542685 GCC2Q8IWJ2 1684 aa7.44□□□□□ -1.22
XRCC4-206ENST00000542685 BLACEA4D250 179 aa7.43□□□□□ -1.22
XRCC4-206ENST00000542685 KRIT1O00522 736 aa7.43□□□□□ -1.22
XRCC4-206ENST00000542685 MAFKO60675 156 aa7.43□□□□□ -1.22
XRCC4-206ENST00000542685 PABPC1P11940 636 aaKnown RBP7.43□□□□□ -1.22
XRCC4-206ENST00000542685 L1TD1Q5T7N2 865 aaKnown RBP7.43□□□□□ -1.22
XRCC4-206ENST00000542685 NSMFQ6X4W1 530 aa7.43□□□□□ -1.22
XRCC4-206ENST00000542685 ST13P5Q8NFI4 369 aaPredicted RBP7.43□□□□□ -1.22
XRCC4-206ENST00000542685 PIP4K2CQ8TBX8 421 aa7.43□□□□□ -1.22
XRCC4-206ENST00000542685 KRTAP4-11Q9BYQ6 195 aa7.43□□□□□ -1.22
XRCC4-206ENST00000542685 BCCIPQ9P287 314 aaKnown RBP eCLIP7.43□□□□□ -1.22
XRCC4-206ENST00000542685 K7ESM1 405 aa7.42□□□□□ -1.22
XRCC4-206ENST00000542685 SLC27A2O14975 620 aa7.42□□□□□ -1.22
XRCC4-206ENST00000542685 STK10O94804 968 aaKnown RBP7.42□□□□□ -1.22
XRCC4-206ENST00000542685 LRG1P02750 347 aa7.42□□□□□ -1.22
XRCC4-206ENST00000542685 FGFR1P11362 822 aa7.42□□□□□ -1.22
XRCC4-206ENST00000542685 CANXP27824 592 aaKnown RBP7.42□□□□□ -1.22
XRCC4-206ENST00000542685 FAM26FQ5R3K3 315 aa7.42□□□□□ -1.22
XRCC4-206ENST00000542685 PRR31Q5SQ13 230 aa7.42□□□□□ -1.22
XRCC4-206ENST00000542685 YOD1Q5VVQ6 348 aaPredicted RBP7.42□□□□□ -1.22
XRCC4-206ENST00000542685 RSPO2Q6UXX9 243 aaPredicted RBP7.42□□□□□ -1.22
XRCC4-206ENST00000542685 MTERF4Q7Z6M4 381 aaKnown RBP7.42□□□□□ -1.22
XRCC4-206ENST00000542685 FAM124AQ86V42 546 aa7.42□□□□□ -1.22
XRCC4-206ENST00000542685 SMAP1Q8IYB5 467 aaPredicted RBP7.42□□□□□ -1.22
XRCC4-206ENST00000542685 TXNDC5Q8NBS9 432 aaKnown RBP7.42□□□□□ -1.22
XRCC4-206ENST00000542685 PHOSPHO1Q8TCT1 267 aa7.42□□□□□ -1.22
XRCC4-206ENST00000542685 DCAF4Q8WV16 495 aa7.42□□□□□ -1.22
XRCC4-206ENST00000542685 OSBP2Q969R2 916 aa7.42□□□□□ -1.22
XRCC4-206ENST00000542685 CLIC6Q96NY7 704 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms