RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 UHRF1BP1Q6BDS2 1440 aa11.59□□□□□ -0.55
GABRB3-204ENST00000541819 BCAMP50895 628 aa11.59□□□□□ -0.55
GABRB3-204ENST00000541819 FOXD4Q12950 439 aaPredicted RBP11.59□□□□□ -0.55
GABRB3-204ENST00000541819 ZC3H12BQ5HYM0 836 aaKnown RBP11.59□□□□□ -0.55
GABRB3-204ENST00000541819 KRT27Q7Z3Y8 459 aa11.59□□□□□ -0.55
GABRB3-204ENST00000541819 RPF1Q9H9Y2 349 aaKnown RBP11.59□□□□□ -0.55
GABRB3-204ENST00000541819 LGR6Q9HBX8 967 aa11.59□□□□□ -0.55
GABRB3-204ENST00000541819 DONSONQ9NYP3 566 aa11.59□□□□□ -0.55
GABRB3-204ENST00000541819 NXF1Q9UBU9 619 aaKnown RBP11.59□□□□□ -0.55
GABRB3-204ENST00000541819 SUN2Q9UH99 717 aa11.59□□□□□ -0.55
GABRB3-204ENST00000541819 ABCA10Q8WWZ4 1543 aa11.59□□□□□ -0.55
GABRB3-204ENST00000541819 CLRN2A0PK11 232 aa11.59□□□□□ -0.55
GABRB3-204ENST00000541819 SNX2O60749 519 aa11.59□□□□□ -0.55
GABRB3-204ENST00000541819 TTLL1O95922 423 aa11.59□□□□□ -0.55
GABRB3-204ENST00000541819 IFNAR2P48551 515 aa11.59□□□□□ -0.55
GABRB3-204ENST00000541819 RAP1GDS1P52306 607 aa11.59□□□□□ -0.55
GABRB3-204ENST00000541819 NSUN2Q08J23 767 aaKnown RBP eCLIP11.59□□□□□ -0.55
GABRB3-204ENST00000541819 RNF207Q6ZRF8 634 aa11.59□□□□□ -0.55
GABRB3-204ENST00000541819 SLC7A5P2Q9GIP4 190 aa11.59□□□□□ -0.55
GABRB3-204ENST00000541819 PCDHA4Q9UN74 947 aa11.59□□□□□ -0.55
GABRB3-204ENST00000541819 POLIQ9UNA4 740 aa11.59□□□□□ -0.55
GABRB3-204ENST00000541819 ZNF445P59923 1031 aa11.59□□□□□ -0.55
GABRB3-204ENST00000541819 TAF1BQ53T94 588 aaPredicted RBP11.59□□□□□ -0.55
GABRB3-204ENST00000541819 TEKT4Q8WW24 435 aa11.59□□□□□ -0.55
GABRB3-204ENST00000541819 PIK3C2GO75747 1445 aa11.59□□□□□ -0.55
GABRB3-204ENST00000541819 SRGAP2CP0DJJ0 459 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 CHRNDQ07001 517 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 CYP4F22Q6NT55 531 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 NLGN1Q8N2Q7 840 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 TXLNGQ9NUQ3 528 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 EPN1Q9Y6I3 576 aaPredicted RBP11.58□□□□□ -0.56
GABRB3-204ENST00000541819 SCINQ9Y6U3 715 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 XDHP47989 1333 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 PFKFB2O60825 505 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 MYL3P08590 195 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 IREB2P48200 963 aaKnown RBP11.58□□□□□ -0.56
GABRB3-204ENST00000541819 RWDD4Q6NW29 188 aaKnown RBP11.58□□□□□ -0.56
GABRB3-204ENST00000541819 PDXDC1Q6P996 788 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 VPS39Q96JC1 886 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 GTPBP10A4D1E9 387 aaKnown RBP11.58□□□□□ -0.56
GABRB3-204ENST00000541819 hCG_1984214I3L0E3 225 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 ZNF713Q8N859 430 aaPredicted RBP11.58□□□□□ -0.56
GABRB3-204ENST00000541819 AK8Q96MA6 479 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 CAPN11Q9UMQ6 739 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 ZNF804BA4D1E1 1349 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 IQANK1A0A1B0GTG1 560 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 ZBED1O96006 694 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 KIAA1755Q5JYT7 1200 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 SPICE1Q8N0Z3 855 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 ZBTB38Q8NAP3 1195 aaPredicted RBP11.58□□□□□ -0.56
GABRB3-204ENST00000541819 EDC4Q6P2E9 1401 aaKnown RBP11.58□□□□□ -0.56
GABRB3-204ENST00000541819 CFLARO15519 480 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 ANP32DO95626 131 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 GCFC2P16383 781 aaKnown RBP11.58□□□□□ -0.56
GABRB3-204ENST00000541819 PTGDRQ13258 359 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 ME3Q16798 604 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 ZMAT2Q96NC0 199 aaKnown RBP11.58□□□□□ -0.56
GABRB3-204ENST00000541819 LRRC37BQ96QE4 947 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 TRAIPQ9BWF2 469 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 FTOQ9C0B1 505 aaKnown RBP eCLIP11.58□□□□□ -0.56
GABRB3-204ENST00000541819 PCIF1Q9H4Z3 704 aa11.58□□□□□ -0.56
GABRB3-204ENST00000541819 CDV3Q9UKY7 258 aaKnown RBP11.58□□□□□ -0.56
GABRB3-204ENST00000541819 ABCC12Q96J65 1359 aa11.57□□□□□ -0.56
GABRB3-204ENST00000541819 RASGRF2O14827 1237 aa11.57□□□□□ -0.56
GABRB3-204ENST00000541819 ADCY1Q08828 1119 aa11.57□□□□□ -0.56
GABRB3-204ENST00000541819 CAPRIN1Q14444 709 aaKnown RBP11.57□□□□□ -0.56
GABRB3-204ENST00000541819 MTERF2Q49AM1 385 aa11.57□□□□□ -0.56
GABRB3-204ENST00000541819 TUBGCP2Q9BSJ2 902 aa11.57□□□□□ -0.56
GABRB3-204ENST00000541819 COG4Q9H9E3 785 aa11.57□□□□□ -0.56
GABRB3-204ENST00000541819 RBM46Q8TBY0 533 aaKnown RBP11.57□□□□□ -0.56
GABRB3-204ENST00000541819 DHTKD1Q96HY7 919 aaPredicted RBP11.57□□□□□ -0.56
GABRB3-204ENST00000541819 STX18Q9P2W9 335 aaKnown RBP11.57□□□□□ -0.56
GABRB3-204ENST00000541819 HPCAL4Q9UM19 191 aa11.57□□□□□ -0.56
GABRB3-204ENST00000541819 BLMP54132 1417 aaPredicted RBP11.57□□□□□ -0.56
GABRB3-204ENST00000541819 ATP10DQ9P241 1426 aa11.57□□□□□ -0.56
GABRB3-204ENST00000541819 PGRMC1O00264 195 aaKnown RBP11.57□□□□□ -0.56
GABRB3-204ENST00000541819 PLS3P13797 630 aa11.57□□□□□ -0.56
GABRB3-204ENST00000541819 LIG3P49916 1009 aa11.57□□□□□ -0.56
GABRB3-204ENST00000541819 FLOT2Q14254 428 aa11.57□□□□□ -0.56
GABRB3-204ENST00000541819 ZKSCAN8Q15776 578 aaPredicted RBP11.57□□□□□ -0.56
GABRB3-204ENST00000541819 TMC4Q7Z404 712 aa11.57□□□□□ -0.56
GABRB3-204ENST00000541819 IFT43Q96FT9 208 aa11.57□□□□□ -0.56
GABRB3-204ENST00000541819 G3BP2Q9UN86 482 aaKnown RBP11.57□□□□□ -0.56
GABRB3-204ENST00000541819 PARD3Q8TEW0 1356 aa11.57□□□□□ -0.56
GABRB3-204ENST00000541819 PNMA6EA0A0J9YXQ4 647 aa11.57□□□□□ -0.56
GABRB3-204ENST00000541819 HADHAP40939 763 aa11.57□□□□□ -0.56
GABRB3-204ENST00000541819 RBM6P78332 1123 aaKnown RBP11.57□□□□□ -0.56
GABRB3-204ENST00000541819 ZNF827Q17R98 1081 aa11.57□□□□□ -0.56
GABRB3-204ENST00000541819 PIP4K2CQ8TBX8 421 aa11.57□□□□□ -0.56
GABRB3-204ENST00000541819 ENOX1Q8TC92 643 aaKnown RBP11.57□□□□□ -0.56
GABRB3-204ENST00000541819 CHCHD3Q9NX63 227 aaKnown RBP11.57□□□□□ -0.56
GABRB3-204ENST00000541819 NEMP1O14524 444 aa11.56□□□□□ -0.56
GABRB3-204ENST00000541819 EPHB4P54760 987 aa11.56□□□□□ -0.56
GABRB3-204ENST00000541819 SLMAPQ14BN4 828 aa11.56□□□□□ -0.56
GABRB3-204ENST00000541819 TBC1D10BQ4KMP7 808 aaPredicted RBP11.56□□□□□ -0.56
GABRB3-204ENST00000541819 PPP1R16BQ96T49 567 aa11.56□□□□□ -0.56
GABRB3-204ENST00000541819 UBE2TQ9NPD8 197 aaPredicted RBP11.56□□□□□ -0.56
GABRB3-204ENST00000541819 STAT2P52630 851 aa11.56□□□□□ -0.56
GABRB3-204ENST00000541819 OSTNP61366 133 aa11.56□□□□□ -0.56
GABRB3-204ENST00000541819 IMPG1Q17R60 797 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms