RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 DNAJC17Q9NVM6 304 aaKnown RBP11.94□□□□□ -0.5
ERBB2-204ENST00000541774 SNX12Q9UMY4 172 aa11.94□□□□□ -0.5
ERBB2-204ENST00000541774 ATICP31939 592 aa11.94□□□□□ -0.5
ERBB2-204ENST00000541774 SCNN1BP51168 640 aa11.94□□□□□ -0.5
ERBB2-204ENST00000541774 KIF11P52732 1056 aa11.94□□□□□ -0.5
ERBB2-204ENST00000541774 AGGF1Q8N302 714 aaeCLIP11.94□□□□□ -0.5
ERBB2-204ENST00000541774 TMCO5AQ8N6Q1 288 aa11.94□□□□□ -0.5
ERBB2-204ENST00000541774 MDM1Q8TC05 714 aa11.94□□□□□ -0.5
ERBB2-204ENST00000541774 FERMT2Q96AC1 680 aa11.94□□□□□ -0.5
ERBB2-204ENST00000541774 VPS37BQ9H9H4 285 aa11.94□□□□□ -0.5
ERBB2-204ENST00000541774 PNMA2Q9UL42 364 aa11.94□□□□□ -0.5
ERBB2-204ENST00000541774 TRAF3IP3Q9Y228 551 aa11.94□□□□□ -0.5
ERBB2-204ENST00000541774 CYP27B1O15528 508 aa11.94□□□□□ -0.5
ERBB2-204ENST00000541774 GMNNO75496 209 aa11.94□□□□□ -0.5
ERBB2-204ENST00000541774 ACADSP16219 412 aa11.94□□□□□ -0.5
ERBB2-204ENST00000541774 VHLP40337 213 aa11.94□□□□□ -0.5
ERBB2-204ENST00000541774 MRPS9P82933 396 aaKnown RBP11.94□□□□□ -0.5
ERBB2-204ENST00000541774 MED21Q13503 144 aa11.94□□□□□ -0.5
ERBB2-204ENST00000541774 ZCWPW2Q504Y3 356 aa11.94□□□□□ -0.5
ERBB2-204ENST00000541774 RASSF3Q86WH2 238 aa11.94□□□□□ -0.5
ERBB2-204ENST00000541774 IWS1Q96ST2 819 aa11.94□□□□□ -0.5
ERBB2-204ENST00000541774 CUEDC2Q9H467 287 aa11.94□□□□□ -0.5
ERBB2-204ENST00000541774 HDAC9Q9UKV0 1011 aa11.94□□□□□ -0.5
ERBB2-204ENST00000541774 TMA7Q9Y2S6 64 aaKnown RBP11.94□□□□□ -0.5
ERBB2-204ENST00000541774 KIF23Q02241 960 aaPredicted RBP11.93□□□□□ -0.5
ERBB2-204ENST00000541774 C17orf50Q8WW18 174 aa11.93□□□□□ -0.5
ERBB2-204ENST00000541774 NMD3Q96D46 503 aaKnown RBP11.93□□□□□ -0.5
ERBB2-204ENST00000541774 CATSPER2Q96P56 530 aa11.93□□□□□ -0.5
ERBB2-204ENST00000541774 CCDC68Q9H2F9 335 aa11.93□□□□□ -0.5
ERBB2-204ENST00000541774 DMGDHQ9UI17 866 aaKnown RBP11.93□□□□□ -0.5
ERBB2-204ENST00000541774 ADGRL3Q9HAR2 1447 aa11.93□□□□□ -0.5
ERBB2-204ENST00000541774 ZMYM6O95789 1325 aa11.93□□□□□ -0.5
ERBB2-204ENST00000541774 EME2A4GXA9 379 aaPredicted RBP11.93□□□□□ -0.5
ERBB2-204ENST00000541774 TAF5LO75529 589 aa11.93□□□□□ -0.5
ERBB2-204ENST00000541774 GSTA1P08263 222 aa11.93□□□□□ -0.5
ERBB2-204ENST00000541774 CAPN12Q6ZSI9 719 aa11.93□□□□□ -0.5
ERBB2-204ENST00000541774 TRIM11Q96F44 468 aa11.93□□□□□ -0.5
ERBB2-204ENST00000541774 UIMC1Q96RL1 719 aa11.93□□□□□ -0.5
ERBB2-204ENST00000541774 B4E1Z4 1266 aa11.93□□□□□ -0.5
ERBB2-204ENST00000541774 LSM1O15116 133 aaKnown RBP11.93□□□□□ -0.5
ERBB2-204ENST00000541774 CYP21A2P08686 494 aa11.93□□□□□ -0.5
ERBB2-204ENST00000541774 VIL1P09327 827 aaKnown RBP11.93□□□□□ -0.5
ERBB2-204ENST00000541774 GCLCP48506 637 aaPredicted RBP11.93□□□□□ -0.5
ERBB2-204ENST00000541774 FXR1P51114 621 aaKnown RBP eCLIP11.93□□□□□ -0.5
ERBB2-204ENST00000541774 TFCP2Q12800 502 aa11.93□□□□□ -0.5
ERBB2-204ENST00000541774 TOB2Q14106 344 aaPredicted RBP11.93□□□□□ -0.5
ERBB2-204ENST00000541774 KRT80Q6KB66 452 aa11.93□□□□□ -0.5
ERBB2-204ENST00000541774 MSL3Q8N5Y2 521 aaKnown RBP11.93□□□□□ -0.5
ERBB2-204ENST00000541774 SYT2Q8N9I0 419 aaPredicted RBP11.93□□□□□ -0.5
ERBB2-204ENST00000541774 SMCR8Q8TEV9 937 aaPredicted RBP11.93□□□□□ -0.5
ERBB2-204ENST00000541774 RUBCNQ92622 972 aa11.93□□□□□ -0.5
ERBB2-204ENST00000541774 ATP6V0A1Q93050 837 aa11.93□□□□□ -0.5
ERBB2-204ENST00000541774 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.93□□□□□ -0.52e-6■■■■□ 21.9
ERBB2-204ENST00000541774 KCND1Q9NSA2 647 aa11.93□□□□□ -0.5
ERBB2-204ENST00000541774 BCAP29Q9UHQ4 241 aa11.93□□□□□ -0.5
ERBB2-204ENST00000541774 ZFP69BQ9UJL9 534 aa11.93□□□□□ -0.5
ERBB2-204ENST00000541774 TTC26A0AVF1 554 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 DEXIO95424 95 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 PSMC1P62191 440 aaKnown RBP11.92□□□□□ -0.5
ERBB2-204ENST00000541774 KPNB1Q14974 876 aaKnown RBP11.92□□□□□ -0.5
ERBB2-204ENST00000541774 DCAF17Q5H9S7 520 aaPredicted RBP11.92□□□□□ -0.5
ERBB2-204ENST00000541774 TTC38Q5R3I4 469 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 CNNM4Q6P4Q7 775 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 CRELD2Q6UXH1 353 aaPredicted RBP11.92□□□□□ -0.5
ERBB2-204ENST00000541774 SH2D4AQ9H788 454 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 FAM53CQ9NYF3 392 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 SMARCAL1Q9NZC9 954 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 MROH1Q8NDA8 1641 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 EEF1GP26641 437 aaKnown RBP11.92□□□□□ -0.5
ERBB2-204ENST00000541774 MLH1P40692 756 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 BYSLQ13895 437 aaKnown RBP11.92□□□□□ -0.5
ERBB2-204ENST00000541774 SLC17A8Q8NDX2 589 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 FAM161BQ96MY7 647 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 ANKRD27Q96NW4 1050 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 TGS1Q96RS0 853 aaKnown RBP11.92□□□□□ -0.5
ERBB2-204ENST00000541774 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.92□□□□□ -0.5
ERBB2-204ENST00000541774 ADGRB1O14514 1584 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 POC1B-GALNT4F8VUJ3 575 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 APOEP02649 317 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 GHRP10912 638 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 TNFAIP3P21580 790 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 GSTT1P30711 240 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 KLC3Q6P597 504 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 RPS6KC1Q96S38 1066 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 TBC1D23Q9NUY8 699 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 NDC80O14777 642 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 UBOX5O94941 541 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 ABCB4P21439 1286 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 IGBP1P78318 339 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 SKOR1P84550 965 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 TRPC3Q13507 836 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 LRRC36Q1X8D7 754 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 CSRNP2Q9H175 543 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 TMEM60Q9H2L4 133 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 SLC39A2Q9NP94 309 aa11.92□□□□□ -0.5
ERBB2-204ENST00000541774 AP2B1P63010 937 aa11.91□□□□□ -0.5
ERBB2-204ENST00000541774 LRRC34Q8IZ02 419 aa11.91□□□□□ -0.5
ERBB2-204ENST00000541774 PIGOQ8TEQ8 1089 aa11.91□□□□□ -0.5
ERBB2-204ENST00000541774 RBM41Q96IZ5 413 aaKnown RBP11.91□□□□□ -0.5
ERBB2-204ENST00000541774 NDNQ99608 321 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms