RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 EFCAB14O75071 495 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 DDAH1O94760 285 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 UPP2O95045 317 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 CXCL10P02778 98 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 AMHP03971 560 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 PARP1P09874 1014 aaKnown RBP10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 ZNF286BP0CG31 522 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 CALM1P0DP23 149 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 CALM2P0DP24 149 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 CALM3P0DP25 149 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 CPA1P15085 419 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 EDNRBP24530 442 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 RCAN1P53805 252 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 NHLH1Q02575 133 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 ARHGAP1Q07960 439 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 GPM6BQ13491 265 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 MFSD10Q14728 455 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 DGKDQ16760 1214 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 PUS10Q3MIT2 529 aaKnown RBP10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 SESTD1Q86VW0 696 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 ZNF654Q8IZM8 581 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 BANK1Q8NDB2 785 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 KAT2BQ92831 832 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 MRPL38Q96DV4 380 aaKnown RBP10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 TCEANC2Q96MN5 208 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 TAAR1Q96RJ0 339 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 CTAGE1Q96RT6 745 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 KATNAL1Q9BW62 490 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 LRRC2Q9BYS8 371 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 C22orf23Q9BZE7 217 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 PNMA2Q9UL42 364 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 FAM50BQ9Y247 325 aa10.05□□□□□ -0.8
CLSTN3-212ENST00000541770 RALGAPA2Q2PPJ7 1873 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 PALM3A6NDB9 673 aaPredicted RBP10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 LGR5O75473 907 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 CSPG5O95196 566 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 GOLGA8HP0CJ92 632 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 THPOP40225 353 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 EVCP57679 992 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 ZNF200P98182 395 aaPredicted RBP10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 PTK7Q13308 1070 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 GRM4Q14833 912 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 STXBP2Q15833 593 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 KIAA0753Q2KHM9 967 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 EPC2Q52LR7 807 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 TIGD5Q53EQ6 642 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 TCEAL5Q5H9L2 206 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 CCDC62Q6P9F0 684 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 APOA5Q6Q788 366 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 SYNE3Q6ZMZ3 975 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 NFXL1Q6ZNB6 911 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 Q6ZUG5 572 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 DBF4BQ8NFT6 615 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 TBC1D5Q92609 795 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 WNT8BQ93098 351 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 YME1L1Q96TA2 773 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 UBA5Q9GZZ9 404 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 CPVLQ9H3G5 476 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 CLDND1Q9NY35 253 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 MAD2L2Q9UI95 211 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 SLC12A7Q9Y666 1083 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 MRVI1Q9Y6F6 885 aa10.04□□□□□ -0.8
CLSTN3-212ENST00000541770 ATG2AQ2TAZ0 1938 aa10.03□□□□□ -0.8
CLSTN3-212ENST00000541770 DHX16O60231 1041 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-212ENST00000541770 EIF2AK2P19525 551 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-212ENST00000541770 SMARCA1P28370 1054 aa10.03□□□□□ -0.8
CLSTN3-212ENST00000541770 KIF5BP33176 963 aa10.03□□□□□ -0.8
CLSTN3-212ENST00000541770 FGD1P98174 961 aa10.03□□□□□ -0.8
CLSTN3-212ENST00000541770 CLUL1Q15846 466 aa10.03□□□□□ -0.8
CLSTN3-212ENST00000541770 ARHGEF16Q5VV41 709 aa10.03□□□□□ -0.8
CLSTN3-212ENST00000541770 CTCFLQ8NI51 663 aaPredicted RBP10.03□□□□□ -0.8
CLSTN3-212ENST00000541770 NEK9Q8TD19 979 aa10.03□□□□□ -0.8
CLSTN3-212ENST00000541770 NSUN6Q8TEA1 469 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-212ENST00000541770 BRF1Q92994 677 aa10.03□□□□□ -0.8
CLSTN3-212ENST00000541770 RMDN3Q96TC7 470 aa10.03□□□□□ -0.8
CLSTN3-212ENST00000541770 KIF2CQ99661 725 aa10.03□□□□□ -0.8
CLSTN3-212ENST00000541770 UPF3BQ9BZI7 483 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-212ENST00000541770 PDRG1Q9NUG6 133 aa10.03□□□□□ -0.8
CLSTN3-212ENST00000541770 NID2Q14112 1375 aa10.02□□□□□ -0.8
CLSTN3-212ENST00000541770 KLF18A0A0U1RQI7 1052 aa10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 RSPH10B2B2RC85 870 aa10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 KLRF2D3W0D1 207 aa10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 RSPH10BP0C881 870 aa10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 GNAQP50148 359 aa10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 ZP2Q05996 745 aa10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 RBL2Q08999 1139 aa10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 TOB2Q14106 344 aaPredicted RBP10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 MBTPS1Q14703 1052 aa10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 ANKRD1Q15327 319 aa10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 CDC37Q16543 378 aaPredicted RBP10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 HFE2Q6ZVN8 426 aa10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 STAG2Q8N3U4 1231 aa10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 FANCBQ8NB91 859 aa10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 SYTL5Q8TDW5 730 aaPredicted RBP10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 PABPC5Q96DU9 382 aaKnown RBP10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 TBC1D32Q96NH3 1257 aa10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 SAMD11Q96NU1 681 aa10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 LZTS2Q9BRK4 669 aa10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 MYL10Q9BUA6 226 aa10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 NSUN3Q9H649 340 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms