RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 LBHD1Q9BQE6 289 aaPredicted RBP10.53□□□□□ -0.72
SNHG1-215ENST00000540904 SENP7Q9BQF6 1050 aa10.53□□□□□ -0.72
SNHG1-215ENST00000540904 MXRA8Q9BRK3 442 aa10.53□□□□□ -0.72
SNHG1-215ENST00000540904 TRPV6Q9H1D0 765 aa10.53□□□□□ -0.72
SNHG1-215ENST00000540904 PCDHA4Q9UN74 947 aa10.53□□□□□ -0.72
SNHG1-215ENST00000540904 KCNJ14Q9UNX9 436 aa10.53□□□□□ -0.72
SNHG1-215ENST00000540904 ALPK3Q96L96 1907 aa10.52□□□□□ -0.72
SNHG1-215ENST00000540904 FAM86B1E9PN63 330 aa10.52□□□□□ -0.73
SNHG1-215ENST00000540904 TLR3O15455 904 aaKnown RBP10.52□□□□□ -0.73
SNHG1-215ENST00000540904 B4GALT4O60513 344 aa10.52□□□□□ -0.73
SNHG1-215ENST00000540904 JAK2O60674 1132 aa10.52□□□□□ -0.73
SNHG1-215ENST00000540904 PPFIA4O75335 1185 aa10.52□□□□□ -0.73
SNHG1-215ENST00000540904 FAM86B2P0C5J1 330 aa10.52□□□□□ -0.73
SNHG1-215ENST00000540904 FDPSP14324 419 aaKnown RBP10.52□□□□□ -0.73
SNHG1-215ENST00000540904 RAG1P15918 1043 aa10.52□□□□□ -0.73
SNHG1-215ENST00000540904 KCNA2P16389 499 aa10.52□□□□□ -0.73
SNHG1-215ENST00000540904 ST3GAL1Q11201 340 aa10.52□□□□□ -0.73
SNHG1-215ENST00000540904 CCDC83Q8IWF9 413 aa10.52□□□□□ -0.73
SNHG1-215ENST00000540904 BLIDQ8IZY5 108 aa10.52□□□□□ -0.73
SNHG1-215ENST00000540904 GIMAP8Q8ND71 665 aaPredicted RBP10.52□□□□□ -0.73
SNHG1-215ENST00000540904 NSUN7Q8NE18 718 aaKnown RBP10.52□□□□□ -0.73
SNHG1-215ENST00000540904 WASF1Q92558 559 aa10.52□□□□□ -0.73
SNHG1-215ENST00000540904 KAT2BQ92831 832 aa10.52□□□□□ -0.73
SNHG1-215ENST00000540904 GDF15Q99988 308 aa10.52□□□□□ -0.73
SNHG1-215ENST00000540904 ALG1Q9BT22 464 aa10.52□□□□□ -0.73
SNHG1-215ENST00000540904 SEZ6LQ9BYH1 1024 aa10.52□□□□□ -0.73
SNHG1-215ENST00000540904 KCNH7Q9NS40 1196 aa10.52□□□□□ -0.73
SNHG1-215ENST00000540904 GJB4Q9NTQ9 266 aa10.52□□□□□ -0.73
SNHG1-215ENST00000540904 TELO2Q9Y4R8 837 aa10.52□□□□□ -0.73
SNHG1-215ENST00000540904 DNAH12Q6ZR08 3092 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 MEIS1O00470 390 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 KIAA0355O15063 1070 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 MAFGO15525 162 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 ST18O60284 1047 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 F2P00734 622 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 CD4P01730 458 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 CYP3A4P08684 503 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 PRR29P0C7W0 189 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 ARP10275 920 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 HOXD8P13378 290 aaPredicted RBP10.51□□□□□ -0.73
SNHG1-215ENST00000540904 ITGB8P26012 769 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 PSEN2P49810 448 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 FOSBP53539 338 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 MFSD10Q14728 455 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 NPY5RQ15761 445 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 GALNT17Q6IS24 598 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 NFRKBQ6P4R8 1299 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 PLA2G4DQ86XP0 818 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 FAM177A1Q8N128 213 aaPredicted RBP10.51□□□□□ -0.73
SNHG1-215ENST00000540904 DAGLBQ8NCG7 672 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 CRYGNQ8WXF5 182 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 BADQ92934 168 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 ZSCAN31Q96LW9 406 aaPredicted RBP10.51□□□□□ -0.73
SNHG1-215ENST00000540904 GPR20Q99678 358 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 PHF20Q9BVI0 1012 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 KATNAL1Q9BW62 490 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 BACH2Q9BYV9 841 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 AGO4Q9HCK5 861 aaKnown RBP10.51□□□□□ -0.73
SNHG1-215ENST00000540904 TRMT13Q9NUP7 481 aaKnown RBP10.51□□□□□ -0.73
SNHG1-215ENST00000540904 TBX21Q9UL17 535 aa10.51□□□□□ -0.73
SNHG1-215ENST00000540904 M0R2N6 131 aa10.5□□□□□ -0.73
SNHG1-215ENST00000540904 LGALS2P05162 132 aa10.5□□□□□ -0.73
SNHG1-215ENST00000540904 KIAA0753Q2KHM9 967 aa10.5□□□□□ -0.73
SNHG1-215ENST00000540904 PRR16Q569H4 304 aa10.5□□□□□ -0.73
SNHG1-215ENST00000540904 UTP14CQ5TAP6 766 aaKnown RBP10.5□□□□□ -0.73
SNHG1-215ENST00000540904 NIPA1Q7RTP0 329 aa10.5□□□□□ -0.73
SNHG1-215ENST00000540904 TRIM50Q86XT4 487 aa10.5□□□□□ -0.73
SNHG1-215ENST00000540904 C7orf31Q8N865 590 aa10.5□□□□□ -0.73
SNHG1-215ENST00000540904 TBCKQ8TEA7 893 aa10.5□□□□□ -0.73
SNHG1-215ENST00000540904 UIMC1Q96RL1 719 aa10.5□□□□□ -0.73
SNHG1-215ENST00000540904 SDF4Q9BRK5 362 aa10.5□□□□□ -0.73
SNHG1-215ENST00000540904 C16orf70Q9BSU1 422 aa10.5□□□□□ -0.73
SNHG1-215ENST00000540904 PPP1R12CQ9BZL4 782 aa10.5□□□□□ -0.73
SNHG1-215ENST00000540904 UBE2OQ9C0C9 1292 aaKnown RBP10.5□□□□□ -0.73
SNHG1-215ENST00000540904 PRO3102Q9H379 93 aa10.5□□□□□ -0.73
SNHG1-215ENST00000540904 JPH1Q9HDC5 661 aaPredicted RBP10.5□□□□□ -0.73
SNHG1-215ENST00000540904 SH2B1Q9NRF2 756 aaPredicted RBP10.5□□□□□ -0.73
SNHG1-215ENST00000540904 KIAA1217Q5T5P2 1943 aa10.5□□□□□ -0.73
SNHG1-215ENST00000540904 IGLV3-22A0A075B6J6 115 aa10.49□□□□□ -0.73
SNHG1-215ENST00000540904 CCDC194A0A1B0GVG4 234 aa10.49□□□□□ -0.73
SNHG1-215ENST00000540904 H3BRB1 525 aa10.49□□□□□ -0.73
SNHG1-215ENST00000540904 DDX39AO00148 427 aaKnown RBP10.49□□□□□ -0.73
SNHG1-215ENST00000540904 HAS3O00219 553 aa10.49□□□□□ -0.73
SNHG1-215ENST00000540904 TIMP1P01033 207 aa10.49□□□□□ -0.73
SNHG1-215ENST00000540904 SUPT20HL2P0C7V6 817 aa10.49□□□□□ -0.73
SNHG1-215ENST00000540904 CYP2C9P11712 490 aa10.49□□□□□ -0.73
SNHG1-215ENST00000540904 CYP2C18P33260 490 aa10.49□□□□□ -0.73
SNHG1-215ENST00000540904 BMP8BP34820 402 aa10.49□□□□□ -0.73
SNHG1-215ENST00000540904 TCF7P36402 384 aaPredicted RBP10.49□□□□□ -0.73
SNHG1-215ENST00000540904 USP11P51784 963 aa10.49□□□□□ -0.73
SNHG1-215ENST00000540904 SETQ01105 290 aaPredicted RBP10.49□□□□□ -0.73
SNHG1-215ENST00000540904 PTPN11Q06124 597 aaPredicted RBP10.49□□□□□ -0.73
SNHG1-215ENST00000540904 ITGB3BPQ13352 177 aaPredicted RBP10.49□□□□□ -0.73
SNHG1-215ENST00000540904 TRIM29Q14134 588 aa10.49□□□□□ -0.73
SNHG1-215ENST00000540904 NONOQ15233 471 aaKnown RBP eCLIP10.49□□□□□ -0.73
SNHG1-215ENST00000540904 PTGISQ16647 500 aa10.49□□□□□ -0.73
SNHG1-215ENST00000540904 HABP4Q5JVS0 413 aaKnown RBP10.49□□□□□ -0.73
SNHG1-215ENST00000540904 KRT25Q7Z3Z0 450 aa10.49□□□□□ -0.73
SNHG1-215ENST00000540904 OXER1Q8TDS5 423 aa10.49□□□□□ -0.73
SNHG1-215ENST00000540904 SEPT1Q8WYJ6 367 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms