RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 SUSD3Q96L08 255 aa5.59□□□□□ -1.51
SNHG1-214ENST00000540865 FBXL18Q96ME1 805 aa5.59□□□□□ -1.51
SNHG1-214ENST00000540865 UIMC1Q96RL1 719 aa5.59□□□□□ -1.51
SNHG1-214ENST00000540865 UPF3AQ9H1J1 476 aaKnown RBP5.59□□□□□ -1.51
SNHG1-214ENST00000540865 CD320Q9NPF0 282 aa5.59□□□□□ -1.51
SNHG1-214ENST00000540865 ANO2Q9NQ90 1003 aa5.59□□□□□ -1.51
SNHG1-214ENST00000540865 LMCD1Q9NZU5 365 aa5.59□□□□□ -1.51
SNHG1-214ENST00000540865 ADAMTS5Q9UNA0 930 aa5.59□□□□□ -1.51
SNHG1-214ENST00000540865 ZDBF2Q9HCK1 2354 aa5.58□□□□□ -1.52
SNHG1-214ENST00000540865 DMDP11532 3685 aa5.58□□□□□ -1.52
SNHG1-214ENST00000540865 EPOPA6NHQ4 379 aa5.58□□□□□ -1.52
SNHG1-214ENST00000540865 CABYRO75952 493 aa5.58□□□□□ -1.52
SNHG1-214ENST00000540865 SNAI1O95863 264 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-214ENST00000540865 CA3P07451 260 aa5.58□□□□□ -1.52
SNHG1-214ENST00000540865 CELA2BP08218 269 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-214ENST00000540865 PDIA4P13667 645 aaKnown RBP5.58□□□□□ -1.52
SNHG1-214ENST00000540865 STAT3P40763 770 aa5.58□□□□□ -1.52
SNHG1-214ENST00000540865 SERPINB4P48594 390 aa5.58□□□□□ -1.52
SNHG1-214ENST00000540865 CCL23P55773 120 aa5.58□□□□□ -1.52
SNHG1-214ENST00000540865 DYNLL1P63167 89 aaKnown RBP5.58□□□□□ -1.52
SNHG1-214ENST00000540865 PDE4CQ08493 712 aa5.58□□□□□ -1.52
SNHG1-214ENST00000540865 ZNF211Q13398 564 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-214ENST00000540865 MTX1Q13505 466 aa5.58□□□□□ -1.52
SNHG1-214ENST00000540865 ACVR2BQ13705 512 aa5.58□□□□□ -1.52
SNHG1-214ENST00000540865 GAS6Q14393 721 aa5.58□□□□□ -1.52
SNHG1-214ENST00000540865 EFHC2Q5JST6 749 aa5.58□□□□□ -1.52
SNHG1-214ENST00000540865 C16orf46Q6P387 395 aa5.58□□□□□ -1.52
SNHG1-214ENST00000540865 TMED8Q6PL24 325 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-214ENST00000540865 FAM178BQ8IXR5 827 aa5.58□□□□□ -1.52
SNHG1-214ENST00000540865 GALNT6Q8NCL4 622 aa5.58□□□□□ -1.52
SNHG1-214ENST00000540865 PHOSPHO2Q8TCD6 241 aa5.58□□□□□ -1.52
SNHG1-214ENST00000540865 ARNTL2Q8WYA1 636 aa5.58□□□□□ -1.52
SNHG1-214ENST00000540865 SSH1Q8WYL5 1049 aa5.58□□□□□ -1.52
SNHG1-214ENST00000540865 NOC4LQ9BVI4 516 aaKnown RBP5.58□□□□□ -1.52
SNHG1-214ENST00000540865 TRAIPQ9BWF2 469 aa5.58□□□□□ -1.52
SNHG1-214ENST00000540865 ZCCHC2Q9C0B9 1178 aaKnown RBP5.58□□□□□ -1.52
SNHG1-214ENST00000540865 SH2D4AQ9H788 454 aa5.58□□□□□ -1.52
SNHG1-214ENST00000540865 NEUROD4Q9HD90 331 aa5.58□□□□□ -1.52
SNHG1-214ENST00000540865 ZHX1Q9UKY1 873 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-214ENST00000540865 HCN2Q9UL51 889 aa5.58□□□□□ -1.52
SNHG1-214ENST00000540865 UMODL1Q5DID0 1318 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 ZFHX2Q9C0A1 2572 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-214ENST00000540865 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-214ENST00000540865 DCDC2BA2VCK2 349 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 KIF28PB7ZC32 967 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 TNFRSF10BO14763 440 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 WDR46O15213 610 aaKnown RBP5.57□□□□□ -1.52
SNHG1-214ENST00000540865 CTAGE5O15320 804 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 SRGAP3O43295 1099 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 DCXO43602 365 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 BNIP3LO60238 219 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 ABL1P00519 1130 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 CYP2E1P05181 493 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-214ENST00000540865 CYP7A1P22680 504 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 PLCD1P51178 756 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 TAP1Q03518 808 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 GABPAQ06546 454 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 GRB10Q13322 594 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 LEXMQ3ZCV2 418 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 CCDC184Q52MB2 194 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 KIAA1755Q5JYT7 1200 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 CCDC158Q5M9N0 1113 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 KRT40Q6A162 431 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 TMEM179Q6ZVK1 233 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 MAGEB6Q8N7X4 407 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 COL26A1Q96A83 441 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 VWCEQ96DN2 955 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 ABHD17AQ96GS6 310 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 MYO19Q96H55 970 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 ZNF512BQ96KM6 892 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-214ENST00000540865 SLC9A7Q96T83 725 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 WNT8AQ9H1J5 351 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 ABHD16BQ9H3Z7 469 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 VCPKMTQ9H867 229 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 CERS4Q9HA82 394 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 GPR108Q9NPR9 543 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 ZNF214Q9UL59 606 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-214ENST00000540865 TMX2Q9Y320 296 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-214ENST00000540865 C5orf42Q9H799 3197 aa5.57□□□□□ -1.52
SNHG1-214ENST00000540865 TCF20Q9UGU0 1960 aaKnown RBP5.56□□□□□ -1.52
SNHG1-214ENST00000540865 MYH13Q9UKX3 1938 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 CNTNAP5Q8WYK1 1306 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 SIPA1L1O43166 1804 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 ATAD5Q96QE3 1844 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 TRIOO75962 3097 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 DNAJC25-GNG10A0A024R161 153 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-214ENST00000540865 VWA5AO00534 786 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 MPHOSPH10O00566 681 aaKnown RBP5.56□□□□□ -1.52
SNHG1-214ENST00000540865 KHNYNO15037 678 aaKnown RBP5.56□□□□□ -1.52
SNHG1-214ENST00000540865 ATXN7O15265 892 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-214ENST00000540865 LPXNO60711 386 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 POLR3DP05423 398 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-214ENST00000540865 ACTN1P12814 892 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 RFC2P35250 354 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 SRSF11Q05519 484 aaKnown RBP5.56□□□□□ -1.52
SNHG1-214ENST00000540865 G3BP1Q13283 466 aaKnown RBP eCLIP5.56□□□□□ -1.52
SNHG1-214ENST00000540865 ITGA7Q13683 1181 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 TTLL4Q14679 1199 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms