RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 AMPD3Q01432 767 aa27.46■■□□□ 1.99
TTC3-225ENST00000540756 ERMNQ8TAM6 284 aa27.46■■□□□ 1.99
TTC3-225ENST00000540756 MS4A4AQ96JQ5 239 aa27.46■■□□□ 1.99
TTC3-225ENST00000540756 MOV10L1Q9BXT6 1211 aaKnown RBP27.46■■□□□ 1.99
TTC3-225ENST00000540756 RMND1Q9NWS8 449 aa27.46■■□□□ 1.99
TTC3-225ENST00000540756 DACH1Q9UI36 760 aa27.46■■□□□ 1.99
TTC3-225ENST00000540756 ASTN1O14525 1302 aa27.46■■□□□ 1.99
TTC3-225ENST00000540756 TESPA1A2RU30 521 aaPredicted RBP27.46■■□□□ 1.99
TTC3-225ENST00000540756 DHX15O43143 795 aaKnown RBP27.46■■□□□ 1.99
TTC3-225ENST00000540756 ATP9AO75110 1047 aa27.46■■□□□ 1.99
TTC3-225ENST00000540756 RHOBTB3O94955 611 aa27.46■■□□□ 1.99
TTC3-225ENST00000540756 PRCPP42785 496 aa27.46■■□□□ 1.99
TTC3-225ENST00000540756 FSTL1Q12841 308 aa27.46■■□□□ 1.99
TTC3-225ENST00000540756 CTTNQ14247 550 aaKnown RBP27.46■■□□□ 1.99
TTC3-225ENST00000540756 KCNB1Q14721 858 aa27.46■■□□□ 1.99
TTC3-225ENST00000540756 SARM1Q6SZW1 724 aa27.46■■□□□ 1.99
TTC3-225ENST00000540756 B3GNT9Q6UX72 402 aa27.46■■□□□ 1.99
TTC3-225ENST00000540756 VSIG10LQ86VR7 867 aa27.46■■□□□ 1.99
TTC3-225ENST00000540756 SPC24Q8NBT2 197 aa27.46■■□□□ 1.99
TTC3-225ENST00000540756 CHST13Q8NET6 341 aa27.46■■□□□ 1.99
TTC3-225ENST00000540756 DDX12PQ92771 950 aa27.46■■□□□ 1.99
TTC3-225ENST00000540756 KIAA1217Q5T5P2 1943 aa27.46■■□□□ 1.99
TTC3-225ENST00000540756 PLA2G4BP0C869 781 aa27.45■■□□□ 1.99
TTC3-225ENST00000540756 FCER1AP12319 257 aa27.45■■□□□ 1.99
TTC3-225ENST00000540756 NIPA1Q7RTP0 329 aa27.45■■□□□ 1.99
TTC3-225ENST00000540756 ANKRD35Q8N283 1001 aa27.45■■□□□ 1.99
TTC3-225ENST00000540756 NSUN6Q8TEA1 469 aaKnown RBP27.45■■□□□ 1.99
TTC3-225ENST00000540756 HSD17B14Q9BPX1 270 aa27.45■■□□□ 1.99
TTC3-225ENST00000540756 NFE2L3Q9Y4A8 694 aa27.45■■□□□ 1.99
TTC3-225ENST00000540756 C2orf69Q8N8R5 385 aa27.45■■□□□ 1.98
TTC3-225ENST00000540756 DYDC2Q96IM9 177 aa27.45■■□□□ 1.98
TTC3-225ENST00000540756 TEKT3Q9BXF9 490 aa27.45■■□□□ 1.98
TTC3-225ENST00000540756 CTNND2Q9UQB3 1225 aa27.45■■□□□ 1.98
TTC3-225ENST00000540756 NPHP3-ACAD11A0A0J9YXS1 232 aa27.44■■□□□ 1.98
TTC3-225ENST00000540756 SLITRK3O94933 977 aa27.44■■□□□ 1.98
TTC3-225ENST00000540756 ITGBL1O95965 494 aaPredicted RBP27.44■■□□□ 1.98
TTC3-225ENST00000540756 ERCC3P19447 782 aa27.44■■□□□ 1.98
TTC3-225ENST00000540756 ERCC5P28715 1186 aaPredicted RBP27.44■■□□□ 1.98
TTC3-225ENST00000540756 PDE4DQ08499 809 aa27.44■■□□□ 1.98
TTC3-225ENST00000540756 ENOX1Q8TC92 643 aaKnown RBP27.44■■□□□ 1.98
TTC3-225ENST00000540756 WRAP73Q9P2S5 460 aaPredicted RBP27.44■■□□□ 1.98
TTC3-225ENST00000540756 ZBTB39O15060 712 aa27.43■■□□□ 1.98
TTC3-225ENST00000540756 RGS20O76081 388 aa27.43■■□□□ 1.98
TTC3-225ENST00000540756 OSBPP22059 807 aa27.43■■□□□ 1.98
TTC3-225ENST00000540756 FKBP1BP68106 108 aa27.43■■□□□ 1.98
TTC3-225ENST00000540756 STK4Q13043 487 aa27.43■■□□□ 1.98
TTC3-225ENST00000540756 PABPC4Q13310 644 aaKnown RBP eCLIP27.43■■□□□ 1.98
TTC3-225ENST00000540756 TRIM44Q96DX7 344 aaPredicted RBP27.43■■□□□ 1.98
TTC3-225ENST00000540756 RIT2Q99578 217 aa27.43■■□□□ 1.98
TTC3-225ENST00000540756 POLR3CQ9BUI4 534 aaPredicted RBP27.43■■□□□ 1.98
TTC3-225ENST00000540756 SAMSN1Q9NSI8 373 aaKnown RBP27.43■■□□□ 1.98
TTC3-225ENST00000540756 CCND2P30279 289 aa27.43■■□□□ 1.98
TTC3-225ENST00000540756 CACNB1Q02641 598 aaPredicted RBP27.43■■□□□ 1.98
TTC3-225ENST00000540756 RAD51AP2Q09MP3 1159 aa27.43■■□□□ 1.98
TTC3-225ENST00000540756 TPH2Q8IWU9 490 aa27.43■■□□□ 1.98
TTC3-225ENST00000540756 GIMAP8Q8ND71 665 aaPredicted RBP27.43■■□□□ 1.98
TTC3-225ENST00000540756 DNAJC19Q96DA6 116 aa27.43■■□□□ 1.98
TTC3-225ENST00000540756 UNCXA6NJT0 531 aa27.42■■□□□ 1.98
TTC3-225ENST00000540756 SLC12A3P55017 1021 aa27.42■■□□□ 1.98
TTC3-225ENST00000540756 SEMA3FQ13275 785 aa27.42■■□□□ 1.98
TTC3-225ENST00000540756 BRI3BPQ8WY22 251 aa27.42■■□□□ 1.98
TTC3-225ENST00000540756 EXOC1Q9NV70 894 aa27.42■■□□□ 1.98
TTC3-225ENST00000540756 SYNRGQ9UMZ2 1314 aa27.42■■□□□ 1.98
TTC3-225ENST00000540756 ARSHQ5FYA8 562 aa27.41■■□□□ 1.98
TTC3-225ENST00000540756 PIGOQ8TEQ8 1089 aa27.41■■□□□ 1.98
TTC3-225ENST00000540756 BCAS3Q9H6U6 928 aa27.41■■□□□ 1.98
TTC3-225ENST00000540756 DOCK5Q9H7D0 1870 aa27.41■■□□□ 1.98
TTC3-225ENST00000540756 CCL15-CCL14A0A0B4J2E2 113 aa27.41■■□□□ 1.98
TTC3-225ENST00000540756 BTBD19C9JJ37 291 aa27.41■■□□□ 1.98
TTC3-225ENST00000540756 IDEP14735 1019 aa27.41■■□□□ 1.98
TTC3-225ENST00000540756 CCL15Q16663 113 aa27.41■■□□□ 1.98
TTC3-225ENST00000540756 GPBP1Q86WP2 473 aa27.41■■□□□ 1.98
TTC3-225ENST00000540756 DNM3Q9UQ16 869 aa27.41■■□□□ 1.98
TTC3-225ENST00000540756 SLC26A4O43511 780 aa27.4■■□□□ 1.98
TTC3-225ENST00000540756 ADSSL1Q8N142 457 aa27.4■■□□□ 1.98
TTC3-225ENST00000540756 KIAA0895Q8NCT3 520 aa27.4■■□□□ 1.98
TTC3-225ENST00000540756 NELFBQ8WX92 580 aa27.4■■□□□ 1.98
TTC3-225ENST00000540756 SLC39A2Q9NP94 309 aa27.4■■□□□ 1.98
TTC3-225ENST00000540756 IFNKQ9P0W0 207 aa27.4■■□□□ 1.98
TTC3-225ENST00000540756 PDHXO00330 501 aa27.4■■□□□ 1.98
TTC3-225ENST00000540756 CYP11B2P19099 503 aa27.4■■□□□ 1.98
TTC3-225ENST00000540756 PMS1P54277 932 aaKnown RBP27.4■■□□□ 1.98
TTC3-225ENST00000540756 TPM4P67936 248 aa27.4■■□□□ 1.98
TTC3-225ENST00000540756 UNC13DQ70J99 1090 aa27.4■■□□□ 1.98
TTC3-225ENST00000540756 BANK1Q8NDB2 785 aa27.4■■□□□ 1.98
TTC3-225ENST00000540756 FBXO40Q9UH90 709 aa27.4■■□□□ 1.98
TTC3-225ENST00000540756 TRIM49BA6NDI0 452 aa27.39■■□□□ 1.98
TTC3-225ENST00000540756 PTMAP06454 111 aaKnown RBP27.39■■□□□ 1.98
TTC3-225ENST00000540756 CETPP11597 493 aa27.39■■□□□ 1.98
TTC3-225ENST00000540756 ZNF18P17022 549 aa27.39■■□□□ 1.98
TTC3-225ENST00000540756 FANCCQ00597 558 aa27.39■■□□□ 1.98
TTC3-225ENST00000540756 INPP4AQ96PE3 977 aaPredicted RBP27.39■■□□□ 1.98
TTC3-225ENST00000540756 XPO4Q9C0E2 1151 aaKnown RBP27.39■■□□□ 1.98
TTC3-225ENST00000540756 BHMT2Q9H2M3 363 aa27.39■■□□□ 1.98
TTC3-225ENST00000540756 NRBP1Q9UHY1 535 aa27.39■■□□□ 1.98
TTC3-225ENST00000540756 GTF2A2P52657 109 aa27.38■■□□□ 1.97
TTC3-225ENST00000540756 EPHA7Q15375 998 aa27.38■■□□□ 1.97
TTC3-225ENST00000540756 CT47A1Q5JQC4 288 aaPredicted RBP27.38■■□□□ 1.97
TTC3-225ENST00000540756 SPRYD7Q5W111 196 aa27.38■■□□□ 1.97
TTC3-225ENST00000540756 CNNM4Q6P4Q7 775 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms