RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 TIPINQ9BVW5 301 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 GLIS2Q9BZE0 524 aaPredicted RBP9.26□□□□□ -0.93
C2CD3-215ENST00000540452 BLZF1Q9H2G9 400 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 TMX1Q9H3N1 280 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 RTN4Q9NQC3 1192 aaKnown RBP9.26□□□□□ -0.93
C2CD3-215ENST00000540452 FBXO28Q9NVF7 368 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 RNF181Q9P0P0 153 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 FBXO40Q9UH90 709 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 ODF2LQ9ULJ1 636 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 CTNND2Q9UQB3 1225 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 CSADQ9Y600 493 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 UBE4BO95155 1302 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 GOLGA6L9A6NEM1 432 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 IPO5O00410 1097 aaKnown RBP9.25□□□□□ -0.93
C2CD3-215ENST00000540452 ARHGAP6O43182 974 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 DKC1O60832 514 aaKnown RBP eCLIP9.25□□□□□ -0.93
C2CD3-215ENST00000540452 GNA14O95837 355 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 PLA2G4BP0C869 781 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 SPATA31C1P0DKV0 1188 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 CYP11B2P19099 503 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 SCP2P22307 547 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 FECHP22830 423 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 EPS15P42566 896 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 DNM2P50570 870 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 MARSP56192 900 aaKnown RBP9.25□□□□□ -0.93
C2CD3-215ENST00000540452 CCZ1BP86790 482 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 CCZ1P86791 482 aaPredicted RBP9.25□□□□□ -0.93
C2CD3-215ENST00000540452 MCM6Q14566 821 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 ZYXQ15942 572 aaKnown RBP9.25□□□□□ -0.93
C2CD3-215ENST00000540452 NFIL3Q16649 462 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 EDRF1Q3B7T1 1238 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 LRCH2Q5VUJ6 765 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 CCDC174Q6PII3 467 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 TMC6Q7Z403 805 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 PNMA8AQ86V59 439 aaPredicted RBP9.25□□□□□ -0.93
C2CD3-215ENST00000540452 CATSPER3Q86XQ3 398 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 SLC17A8Q8NDX2 589 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 CHST13Q8NET6 341 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 DNERQ8NFT8 737 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 GTF3C2Q8WUA4 911 aaPredicted RBP9.25□□□□□ -0.93
C2CD3-215ENST00000540452 CACTINQ8WUQ7 758 aaKnown RBP9.25□□□□□ -0.93
C2CD3-215ENST00000540452 TMEM174Q8WUU8 243 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 GPRASP2Q96D09 838 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 PRIMPOLQ96LW4 560 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 CEP63Q96MT8 703 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 TSG101Q99816 390 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 TEKT3Q9BXF9 490 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 TEX13BQ9BXU2 312 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 OLFML3Q9NRN5 406 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 MAGEC2Q9UBF1 373 aaPredicted RBP9.25□□□□□ -0.93
C2CD3-215ENST00000540452 UBIAD1Q9Y5Z9 338 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 PFASO15067 1338 aa9.25□□□□□ -0.93
C2CD3-215ENST00000540452 B4DLN1 442 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 KCNJ18B7U540 433 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 IRF6O14896 467 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 EIF3DO15371 548 aaKnown RBP eCLIP9.24□□□□□ -0.93
C2CD3-215ENST00000540452 GAS7O60861 476 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 USP2O75604 605 aaPredicted RBP9.24□□□□□ -0.93
C2CD3-215ENST00000540452 TOMM70O94826 608 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 SKILP12757 684 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 HOXA13P31271 388 aaPredicted RBP9.24□□□□□ -0.93
C2CD3-215ENST00000540452 SFNP31947 248 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 ABCD1P33897 745 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 PPP2R3AQ06190 1150 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 PABPC4Q13310 644 aaKnown RBP eCLIP9.24□□□□□ -0.93
C2CD3-215ENST00000540452 ALCAMQ13740 583 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 KCNJ12Q14500 433 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 ARID5BQ14865 1188 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 CCDC144BQ3MJ40 725 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 FIGNQ5HY92 759 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 FAM26FQ5R3K3 315 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 STXBP4Q6ZWJ1 553 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 FILIP1Q7Z7B0 1213 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 ERO1BQ86YB8 467 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 ZC3H3Q8IXZ2 948 aaKnown RBP9.24□□□□□ -0.93
C2CD3-215ENST00000540452 ANKRD13AQ8IZ07 590 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 MYOCDQ8IZQ8 938 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 CSGALNACT2Q8N6G5 542 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 SYTL5Q8TDW5 730 aaPredicted RBP9.24□□□□□ -0.93
C2CD3-215ENST00000540452 STAMQ92783 540 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 TRIM47Q96LD4 638 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 AGBL1Q96MI9 1066 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 TRERF1Q96PN7 1200 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 NACC1Q96RE7 527 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 IWS1Q96ST2 819 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 SENP7Q9BQF6 1050 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 EIF2AK1Q9BQI3 630 aaKnown RBP9.24□□□□□ -0.93
C2CD3-215ENST00000540452 NUP58Q9BVL2 599 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 ACAD9Q9H845 621 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 JADE2Q9NQC1 790 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 SAMSN1Q9NSI8 373 aaKnown RBP9.24□□□□□ -0.93
C2CD3-215ENST00000540452 INTS13Q9NVM9 706 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 TCEAL9Q9UHQ7 104 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 ZNF214Q9UL59 606 aaPredicted RBP9.24□□□□□ -0.93
C2CD3-215ENST00000540452 KIAA1024Q9UPX6 916 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 KCNH4Q9UQ05 1017 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 COL4A3BPQ9Y5P4 624 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 SNCAIPQ9Y6H5 919 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 ZHX2Q9Y6X8 837 aa9.24□□□□□ -0.93
C2CD3-215ENST00000540452 ASTN2O75129 1339 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms