RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 ANAPC15P60006 121 aa13.15□□□□□ -0.3
TMEM258-205ENST00000540434 STK3Q13188 491 aa13.15□□□□□ -0.3
TMEM258-205ENST00000540434 ITGA7Q13683 1181 aa13.15□□□□□ -0.3
TMEM258-205ENST00000540434 WWC2Q6AWC2 1192 aa13.15□□□□□ -0.3
TMEM258-205ENST00000540434 PTCRAQ6ISU1 281 aaPredicted RBP13.15□□□□□ -0.3
TMEM258-205ENST00000540434 CXCL17Q6UXB2 119 aa13.15□□□□□ -0.3
TMEM258-205ENST00000540434 TMCO2Q7Z6W1 182 aaPredicted RBP13.15□□□□□ -0.3
TMEM258-205ENST00000540434 PNMA2Q9UL42 364 aa13.15□□□□□ -0.3
TMEM258-205ENST00000540434 TRIP12Q14669 1992 aaPredicted RBP13.14□□□□□ -0.31
TMEM258-205ENST00000540434 ASB14A6NK59 587 aa13.14□□□□□ -0.31
TMEM258-205ENST00000540434 RGS20O76081 388 aa13.14□□□□□ -0.31
TMEM258-205ENST00000540434 EIF2AK2P19525 551 aaKnown RBP13.14□□□□□ -0.31
TMEM258-205ENST00000540434 PSMC6P62333 389 aa13.14□□□□□ -0.31
TMEM258-205ENST00000540434 UBE2SQ16763 222 aa13.14□□□□□ -0.31
TMEM258-205ENST00000540434 LEXMQ3ZCV2 418 aa13.14□□□□□ -0.31
TMEM258-205ENST00000540434 FCHSD1Q86WN1 690 aa13.14□□□□□ -0.31
TMEM258-205ENST00000540434 COPS5Q92905 334 aa13.14□□□□□ -0.31
TMEM258-205ENST00000540434 RMDN3Q96TC7 470 aa13.14□□□□□ -0.31
TMEM258-205ENST00000540434 ALDH8A1Q9H2A2 487 aaPredicted RBP13.14□□□□□ -0.31
TMEM258-205ENST00000540434 BCAS3Q9H6U6 928 aa13.14□□□□□ -0.31
TMEM258-205ENST00000540434 PXMP2Q9NR77 195 aa13.14□□□□□ -0.31
TMEM258-205ENST00000540434 RBM28Q9NW13 759 aaKnown RBP13.14□□□□□ -0.31
TMEM258-205ENST00000540434 MTUS1Q9ULD2 1270 aa13.14□□□□□ -0.31
TMEM258-205ENST00000540434 GNEQ9Y223 722 aaKnown RBP13.14□□□□□ -0.31
TMEM258-205ENST00000540434 C5orf42Q9H799 3197 aa13.13□□□□□ -0.31
TMEM258-205ENST00000540434 SPTBN4Q9H254 2564 aa13.13□□□□□ -0.31
TMEM258-205ENST00000540434 RBM47A0AV96 593 aaKnown RBP13.13□□□□□ -0.31
TMEM258-205ENST00000540434 STXBP3O00186 592 aa13.13□□□□□ -0.31
TMEM258-205ENST00000540434 CABYRO75952 493 aa13.13□□□□□ -0.31
TMEM258-205ENST00000540434 RCAN1P53805 252 aa13.13□□□□□ -0.31
TMEM258-205ENST00000540434 ST3GAL1Q11201 340 aa13.13□□□□□ -0.31
TMEM258-205ENST00000540434 NOL8Q76FK4 1167 aaKnown RBP13.13□□□□□ -0.31
TMEM258-205ENST00000540434 HEATR3Q7Z4Q2 680 aa13.13□□□□□ -0.31
TMEM258-205ENST00000540434 MCF2L2Q86YR7 1114 aa13.13□□□□□ -0.31
TMEM258-205ENST00000540434 NECAB1Q8N987 351 aa13.13□□□□□ -0.31
TMEM258-205ENST00000540434 DNERQ8NFT8 737 aa13.13□□□□□ -0.31
TMEM258-205ENST00000540434 ZNF274Q96GC6 653 aaPredicted RBP13.13□□□□□ -0.31
TMEM258-205ENST00000540434 PDCD2LQ9BRP1 358 aa13.13□□□□□ -0.31
TMEM258-205ENST00000540434 ADD3Q9UEY8 706 aaKnown RBP13.13□□□□□ -0.31
TMEM258-205ENST00000540434 MYO15AQ9UKN7 3530 aa13.13□□□□□ -0.31
TMEM258-205ENST00000540434 ZFHX2Q9C0A1 2572 aaPredicted RBP13.12□□□□□ -0.31
TMEM258-205ENST00000540434 KIAA1217Q5T5P2 1943 aa13.12□□□□□ -0.31
TMEM258-205ENST00000540434 GRXCR2A6NFK2 248 aa13.12□□□□□ -0.31
TMEM258-205ENST00000540434 H3BQ06 376 aaPredicted RBP13.12□□□□□ -0.31
TMEM258-205ENST00000540434 GCOM1H8Y6P7 765 aaPredicted RBP13.12□□□□□ -0.31
TMEM258-205ENST00000540434 GFRA3O60609 400 aa13.12□□□□□ -0.31
TMEM258-205ENST00000540434 CTDNEP1O95476 244 aa13.12□□□□□ -0.31
TMEM258-205ENST00000540434 NR3C2P08235 984 aa13.12□□□□□ -0.31
TMEM258-205ENST00000540434 POLR2MP0CAP2 368 aa13.12□□□□□ -0.31
TMEM258-205ENST00000540434 CYP2C9P11712 490 aa13.12□□□□□ -0.31
TMEM258-205ENST00000540434 NEK4P51957 841 aa13.12□□□□□ -0.31
TMEM258-205ENST00000540434 MRPS9P82933 396 aaKnown RBP13.12□□□□□ -0.31
TMEM258-205ENST00000540434 TNFAIP2Q03169 654 aa13.12□□□□□ -0.31
TMEM258-205ENST00000540434 SCRN1Q12765 414 aa13.12□□□□□ -0.31
TMEM258-205ENST00000540434 ME3Q16798 604 aa13.12□□□□□ -0.31
TMEM258-205ENST00000540434 HERC6Q8IVU3 1022 aa13.12□□□□□ -0.31
TMEM258-205ENST00000540434 PGBD1Q96JS3 809 aa13.12□□□□□ -0.31
TMEM258-205ENST00000540434 AIFM3Q96NN9 605 aa13.12□□□□□ -0.31
TMEM258-205ENST00000540434 SEZ6LQ9BYH1 1024 aa13.12□□□□□ -0.31
TMEM258-205ENST00000540434 TELO2Q9Y4R8 837 aa13.12□□□□□ -0.31
TMEM258-205ENST00000540434 DMDP11532 3685 aa13.11□□□□□ -0.31
TMEM258-205ENST00000540434 DYNC1LI2O43237 492 aaPredicted RBP13.11□□□□□ -0.31
TMEM258-205ENST00000540434 PRPF3O43395 683 aaKnown RBP13.11□□□□□ -0.31
TMEM258-205ENST00000540434 MYCLP12524 364 aaPredicted RBP13.11□□□□□ -0.31
TMEM258-205ENST00000540434 IFNAR1P17181 557 aa13.11□□□□□ -0.31
TMEM258-205ENST00000540434 FOXK2Q01167 660 aa13.11□□□□□ -0.31
TMEM258-205ENST00000540434 PDE4DQ08499 809 aa13.11□□□□□ -0.31
TMEM258-205ENST00000540434 TCF15Q12870 199 aa13.11□□□□□ -0.31
TMEM258-205ENST00000540434 PGM5Q15124 567 aa13.11□□□□□ -0.31
TMEM258-205ENST00000540434 FSCN1Q16658 493 aaKnown RBP13.11□□□□□ -0.31
TMEM258-205ENST00000540434 PFKFB3Q16875 520 aaPredicted RBP13.11□□□□□ -0.31
TMEM258-205ENST00000540434 ARHGEF16Q5VV41 709 aa13.11□□□□□ -0.31
TMEM258-205ENST00000540434 CCDC62Q6P9F0 684 aa13.11□□□□□ -0.31
TMEM258-205ENST00000540434 SEPT14Q6ZU15 432 aa13.11□□□□□ -0.31
TMEM258-205ENST00000540434 VSIG10LQ86VR7 867 aa13.11□□□□□ -0.31
TMEM258-205ENST00000540434 NSUN6Q8TEA1 469 aaKnown RBP13.11□□□□□ -0.31
TMEM258-205ENST00000540434 PPP1R13LQ8WUF5 828 aa13.11□□□□□ -0.31
TMEM258-205ENST00000540434 SLC26A6Q9BXS9 759 aa13.11□□□□□ -0.31
TMEM258-205ENST00000540434 C22orf23Q9BZE7 217 aa13.11□□□□□ -0.31
TMEM258-205ENST00000540434 PSTPIP2Q9H939 334 aa13.11□□□□□ -0.31
TMEM258-205ENST00000540434 VTA1Q9NP79 307 aa13.11□□□□□ -0.31
TMEM258-205ENST00000540434 TMEM260Q9NX78 707 aa13.11□□□□□ -0.31
TMEM258-205ENST00000540434 SEC63Q9UGP8 760 aaKnown RBP13.11□□□□□ -0.31
TMEM258-205ENST00000540434 PIK3CDO00329 1044 aa13.1□□□□□ -0.31
TMEM258-205ENST00000540434 EDIL3O43854 480 aa13.1□□□□□ -0.31
TMEM258-205ENST00000540434 PFKFB2O60825 505 aa13.1□□□□□ -0.31
TMEM258-205ENST00000540434 PFKMP08237 780 aa13.1□□□□□ -0.31
TMEM258-205ENST00000540434 RBM25P49756 843 aaKnown RBP13.1□□□□□ -0.31
TMEM258-205ENST00000540434 SP2Q02086 613 aa13.1□□□□□ -0.31
TMEM258-205ENST00000540434 LY6KQ17RY6 165 aa13.1□□□□□ -0.31
TMEM258-205ENST00000540434 IQSEC1Q6DN90 963 aa13.1□□□□□ -0.31
TMEM258-205ENST00000540434 PHOSPHO2Q8TCD6 241 aa13.1□□□□□ -0.31
TMEM258-205ENST00000540434 MFSD14AQ96MC6 490 aa13.1□□□□□ -0.31
TMEM258-205ENST00000540434 WDR11Q9BZH6 1224 aa13.1□□□□□ -0.31
TMEM258-205ENST00000540434 GJB4Q9NTQ9 266 aa13.1□□□□□ -0.31
TMEM258-205ENST00000540434 TRMT13Q9NUP7 481 aaKnown RBP13.1□□□□□ -0.31
TMEM258-205ENST00000540434 BARHL2Q9NY43 387 aa13.1□□□□□ -0.31
TMEM258-205ENST00000540434 TANC1Q9C0D5 1861 aa13.1□□□□□ -0.31
TMEM258-205ENST00000540434 FRMPD4Q14CM0 1322 aa13.1□□□□□ -0.31
TMEM258-205ENST00000540434 SCN10AQ9Y5Y9 1956 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms