RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 IFIT3O14879 490 aaKnown RBP10.4□□□□□ -0.75
CTNNA1-243ENST00000540387 TPD52L2O43399 206 aaKnown RBP10.4□□□□□ -0.75
CTNNA1-243ENST00000540387 LGR5O75473 907 aa10.4□□□□□ -0.75
CTNNA1-243ENST00000540387 NQO1P15559 274 aaKnown RBP10.4□□□□□ -0.75
CTNNA1-243ENST00000540387 DPEP1P16444 411 aa10.4□□□□□ -0.75
CTNNA1-243ENST00000540387 ERCC5P28715 1186 aaPredicted RBP10.4□□□□□ -0.75
CTNNA1-243ENST00000540387 PTGER2P43116 358 aa10.4□□□□□ -0.75
CTNNA1-243ENST00000540387 ZAP70P43403 619 aa10.4□□□□□ -0.75
CTNNA1-243ENST00000540387 CARSP49589 748 aaKnown RBP10.4□□□□□ -0.75
CTNNA1-243ENST00000540387 SARSP49591 514 aaKnown RBP10.4□□□□□ -0.75
CTNNA1-243ENST00000540387 KCNJ2P63252 427 aa10.4□□□□□ -0.75
CTNNA1-243ENST00000540387 RASA3Q14644 834 aa10.4□□□□□ -0.75
CTNNA1-243ENST00000540387 LBRQ14739 615 aaKnown RBP10.4□□□□□ -0.75
CTNNA1-243ENST00000540387 SGSM1Q2NKQ1 1148 aa10.4□□□□□ -0.75
CTNNA1-243ENST00000540387 PABPC1LQ4VXU2 614 aaKnown RBP10.4□□□□□ -0.75
CTNNA1-243ENST00000540387 NT5DC1Q5TFE4 455 aa10.4□□□□□ -0.75
CTNNA1-243ENST00000540387 SPATA1Q5VX52 437 aa10.4□□□□□ -0.75
CTNNA1-243ENST00000540387 CCDC197Q8NCU1 140 aa10.4□□□□□ -0.75
CTNNA1-243ENST00000540387 KCNV2Q8TDN2 545 aa10.4□□□□□ -0.75
CTNNA1-243ENST00000540387 TSPAN18Q96SJ8 248 aa10.4□□□□□ -0.75
CTNNA1-243ENST00000540387 CASZ1Q86V15 1759 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 CHGBP05060 677 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 PAEPP09466 180 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 KCNA3P22001 575 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 GUCY2FP51841 1108 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 STX17P56962 302 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 KIF23Q02241 960 aaPredicted RBP10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 IFI16Q16666 785 aaKnown RBP10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 CDKAL1Q5VV42 579 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 RINLQ6ZS11 566 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 ANKRD27Q96NW4 1050 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 MOV10L1Q9BXT6 1211 aaKnown RBP10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 AGXT2Q9BYV1 514 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 PAG1Q9NWQ8 432 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 POLLQ9UGP5 575 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 PLAAQ9Y263 795 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 ZNF510Q9Y2H8 683 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 MYH7P12883 1935 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 SPEF2Q9C093 1822 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 C10orf71Q711Q0 1435 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 A8MUI8 341 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 KRT86O43790 486 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 UFL1O94874 794 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 CCT6AP40227 531 aaKnown RBP10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 PTPAQ15257 358 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 FAM133BQ5BKY9 247 aaKnown RBP10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 RNF220Q5VTB9 566 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 C8orf74Q6P047 294 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 TMC4Q7Z404 712 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 ZNF512BQ96KM6 892 aaPredicted RBP10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 PREBQ9HCU5 417 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 GALNT8Q9NY28 637 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 SNX12Q9UMY4 172 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 AGAP1Q9UPQ3 857 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 MAPK8IP1Q9UQF2 711 aa10.39□□□□□ -0.75
CTNNA1-243ENST00000540387 ORC4O43929 436 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 PDHA1P08559 390 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 INHBCP55103 352 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 EXOSC10Q01780 885 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 RASGRF1Q13972 1273 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 ZRSR2Q15696 482 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 ENOX2Q16206 610 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 CAVIN4Q5BKX8 364 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 AKNAD1Q5T1N1 836 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 KLHL10Q6JEL2 608 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 DPY19L2Q6NUT2 758 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 FBXO33Q7Z6M2 555 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 VPS37DQ86XT2 251 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 LMNTD2Q8IXW0 634 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 IFT20Q8IY31 132 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 ELOA2Q8IYF1 753 aaPredicted RBP10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 TBC1D16Q8TBP0 767 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 ZNF274Q96GC6 653 aaPredicted RBP10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 LACRTQ9GZZ8 138 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 SMARCAL1Q9NZC9 954 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 CNOT8Q9UFF9 292 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 GGA1Q9UJY5 639 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 MYH13Q9UKX3 1938 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 RCCD1A6NED2 376 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 LRRC10BA6NIK2 292 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 C6orf229H3BNL8 230 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 UQCRFS1P1P0C7P4 283 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 HIBADHP31937 336 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 MPP3Q13368 585 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 SEPT2Q15019 361 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 CCDC129Q6ZRS4 1044 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 ZNF662Q6ZS27 426 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 GRAMD1CQ8IYS0 662 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 TRIML1Q8N9V2 468 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 IFT81Q8WYA0 676 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 KIFAP3Q92845 792 aa10.38□□□□□ -0.75
CTNNA1-243ENST00000540387 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.38□□□□□ -0.754e-7■■■■■ 68.7
CTNNA1-243ENST00000540387 SYNRGQ9UMZ2 1314 aa10.37□□□□□ -0.75
CTNNA1-243ENST00000540387 IRS2Q9Y4H2 1338 aa10.37□□□□□ -0.75
CTNNA1-243ENST00000540387 ESYT3A0FGR9 886 aa10.37□□□□□ -0.75
CTNNA1-243ENST00000540387 GCOM1H8Y6P7 765 aaPredicted RBP10.37□□□□□ -0.75
CTNNA1-243ENST00000540387 GLI1P08151 1106 aa10.37□□□□□ -0.75
CTNNA1-243ENST00000540387 MYZAPP0CAP1 466 aa10.37□□□□□ -0.75
CTNNA1-243ENST00000540387 SP100P23497 879 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms