RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 PIK3R5Q8WYR1 880 aa10.74□□□□□ -0.69
CLIP1-212ENST00000540304 TBC1D5Q92609 795 aa10.74□□□□□ -0.69
CLIP1-212ENST00000540304 TRMT1Q9NXH9 659 aaKnown RBP10.74□□□□□ -0.69
CLIP1-212ENST00000540304 CCPG1Q9ULG6 757 aa10.74□□□□□ -0.69
CLIP1-212ENST00000540304 KIAA1024Q9UPX6 916 aa10.74□□□□□ -0.69
CLIP1-212ENST00000540304 IGLV3-22A0A075B6J6 115 aa10.73□□□□□ -0.69
CLIP1-212ENST00000540304 MED24O75448 989 aa10.73□□□□□ -0.69
CLIP1-212ENST00000540304 PSMD2Q13200 908 aa10.73□□□□□ -0.69
CLIP1-212ENST00000540304 ANGEL2Q5VTE6 544 aaKnown RBP10.73□□□□□ -0.69
CLIP1-212ENST00000540304 E4F1Q66K89 784 aaPredicted RBP10.73□□□□□ -0.69
CLIP1-212ENST00000540304 NCAPH2Q6IBW4 605 aa10.73□□□□□ -0.69
CLIP1-212ENST00000540304 IRF2BP1Q8IU81 584 aa10.73□□□□□ -0.69
CLIP1-212ENST00000540304 CSGALNACT2Q8N6G5 542 aa10.73□□□□□ -0.69
CLIP1-212ENST00000540304 TC2NQ8N9U0 490 aa10.73□□□□□ -0.69
CLIP1-212ENST00000540304 DUSP9Q99956 384 aaKnown RBP10.73□□□□□ -0.69
CLIP1-212ENST00000540304 SRRTQ9BXP5 876 aaKnown RBP10.73□□□□□ -0.69
CLIP1-212ENST00000540304 SLC39A2Q9NP94 309 aa10.73□□□□□ -0.69
CLIP1-212ENST00000540304 BMP2KQ9NSY1 1161 aaPredicted RBP10.73□□□□□ -0.69
CLIP1-212ENST00000540304 TAB2Q9NYJ8 693 aa10.73□□□□□ -0.69
CLIP1-212ENST00000540304 MAGEC2Q9UBF1 373 aaPredicted RBP10.73□□□□□ -0.69
CLIP1-212ENST00000540304 ZNF536O15090 1300 aa10.73□□□□□ -0.69
CLIP1-212ENST00000540304 PLA2G4BP0C869 781 aa10.73□□□□□ -0.69
CLIP1-212ENST00000540304 IDEP14735 1019 aa10.73□□□□□ -0.69
CLIP1-212ENST00000540304 USP14P54578 494 aa10.73□□□□□ -0.69
CLIP1-212ENST00000540304 EHHADHQ08426 723 aa10.73□□□□□ -0.69
CLIP1-212ENST00000540304 PPFIBP1Q86W92 1011 aa10.73□□□□□ -0.69
CLIP1-212ENST00000540304 SCYL3Q8IZE3 742 aa10.73□□□□□ -0.69
CLIP1-212ENST00000540304 GPC2Q8N158 579 aa10.73□□□□□ -0.69
CLIP1-212ENST00000540304 PDCL2Q8N4E4 241 aa10.73□□□□□ -0.69
CLIP1-212ENST00000540304 CYP2W1Q8TAV3 490 aa10.73□□□□□ -0.69
CLIP1-212ENST00000540304 HPS3Q969F9 1004 aa10.73□□□□□ -0.69
CLIP1-212ENST00000540304 EEF2KMTQ96G04 330 aa10.73□□□□□ -0.69
CLIP1-212ENST00000540304 VPS16Q9H269 839 aa10.73□□□□□ -0.69
CLIP1-212ENST00000540304 GPRC5DQ9NZD1 345 aa10.73□□□□□ -0.69
CLIP1-212ENST00000540304 VAV3Q9UKW4 847 aa10.73□□□□□ -0.69
CLIP1-212ENST00000540304 PARP14Q460N5 1801 aa10.73□□□□□ -0.69
CLIP1-212ENST00000540304 E9PMD0 336 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 LMNB1P20700 586 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 RPA1P27694 616 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 SSR1P43307 286 aaKnown RBP10.72□□□□□ -0.69
CLIP1-212ENST00000540304 HSD17B4P51659 736 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 MTMR2Q13614 643 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 ANKRD40Q6AI12 368 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 NYAP1Q6ZVC0 841 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 CREBRFQ8IUR6 639 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 TMEM139Q8IV31 216 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 FAM114A1Q8IWE2 563 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 DNAJC19Q96DA6 116 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 AGBL1Q96MI9 1066 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 BAG1Q99933 345 aaPredicted RBP10.72□□□□□ -0.69
CLIP1-212ENST00000540304 TANGO6Q9C0B7 1094 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 ZNF112Q9UJU3 913 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 SBF1O95248 1867 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 AKR1B15C9JRZ8 316 aaPredicted RBP10.72□□□□□ -0.69
CLIP1-212ENST00000540304 ARHGAP6O43182 974 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 CCP110O43303 1012 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 STX10O60499 249 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 SSBP05455 408 aaKnown RBP eCLIP10.72□□□□□ -0.69
CLIP1-212ENST00000540304 VCAM1P19320 739 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 GUCY2CP25092 1073 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 GYS2P54840 703 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 ADKP55263 362 aaKnown RBP10.72□□□□□ -0.69
CLIP1-212ENST00000540304 PTPN14Q15678 1187 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 CENPPQ6IPU0 288 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 ARHGAP27Q6ZUM4 889 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 ARMCX6Q7L4S7 300 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 CATSPER3Q86XQ3 398 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 GUF1Q8N442 669 aaKnown RBP10.72□□□□□ -0.69
CLIP1-212ENST00000540304 TRPM4Q8TD43 1214 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 WDR18Q9BV38 432 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 AS3MTQ9HBK9 375 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 SLC38A10Q9HBR0 1119 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 RABGAP1Q9Y3P9 1069 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.72□□□□□ -0.699e-7■■■■□ 19.7
CLIP1-212ENST00000540304 POTEFA5A3E0 1075 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 POTEIP0CG38 1075 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 COASYQ13057 564 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 BIRC2Q13490 618 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 DGKZQ13574 1117 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 POTEGQ6S5H5 508 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 POTEEQ6S8J3 1075 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 GPBP1Q86WP2 473 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 MCF2L2Q86YR7 1114 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 PPP1R13BQ96KQ4 1090 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 PANX2Q96RD6 677 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 WRNIP1Q96S55 665 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 SEMA6BQ9H3T3 888 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 EMILIN3Q9NT22 766 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 PANK4Q9NVE7 773 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 PNMA2Q9UL42 364 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 PPP2R3BQ9Y5P8 575 aa10.72□□□□□ -0.69
CLIP1-212ENST00000540304 LGALS16A8MUM7 142 aa10.71□□□□□ -0.69
CLIP1-212ENST00000540304 FLOT1O75955 427 aa10.71□□□□□ -0.69
CLIP1-212ENST00000540304 TPM1P09493 284 aa10.71□□□□□ -0.69
CLIP1-212ENST00000540304 SPATA31C1P0DKV0 1188 aa10.71□□□□□ -0.69
CLIP1-212ENST00000540304 SLC12A3P55017 1021 aa10.71□□□□□ -0.69
CLIP1-212ENST00000540304 GHRHRQ02643 423 aa10.71□□□□□ -0.69
CLIP1-212ENST00000540304 RBL2Q08999 1139 aa10.71□□□□□ -0.69
CLIP1-212ENST00000540304 TRIM14Q14142 442 aa10.71□□□□□ -0.69
CLIP1-212ENST00000540304 CEP55Q53EZ4 464 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms