RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 CBX3Q13185 183 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 GLE1Q53GS7 698 aaKnown RBP12.01□□□□□ -0.49
PBX1-212ENST00000540236 PDXDC1Q6P996 788 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 LMBR1LQ6UX01 489 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 SLC25A41Q8N5S1 370 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 ABTB2Q8N961 1025 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 SPIRE2Q8WWL2 714 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 PREBQ9HCU5 417 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 KCND1Q9NSA2 647 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 LRP2BPQ9P2M1 347 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 USP15Q9Y4E8 981 aaPredicted RBP12.01□□□□□ -0.49
PBX1-212ENST00000540236 ARHGAP31Q2M1Z3 1444 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 ITSN2Q9NZM3 1697 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 DCDC2CA8MYV0 355 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 PSMD14O00487 310 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 CCNFP41002 786 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 PRCPP42785 496 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 FNTAP49354 379 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 GALK1P51570 392 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 USP46P62068 366 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 CDR2Q01850 454 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 CATIPQ7Z7H3 387 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 MAML1Q92585 1016 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 MRPL46Q9H2W6 279 aaKnown RBP12.01□□□□□ -0.49
PBX1-212ENST00000540236 C14orf93Q9H972 538 aaKnown RBP12.01□□□□□ -0.49
PBX1-212ENST00000540236 CEP170Q5SW79 1584 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 TTLL13PA6NNM8 815 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 PCYT1AP49585 367 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 CYTH1Q15438 398 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 TTC16Q8NEE8 873 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 USP6NLQ92738 828 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 CCDC77Q9BR77 488 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 RILPL1Q5EBL4 403 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 HPS3Q969F9 1004 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 OSBPL7Q9BZF2 842 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 BRD8Q9H0E9 1235 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 HSPA1LP34931 641 aa12□□□□□ -0.49
PBX1-212ENST00000540236 ZBTB46Q86UZ6 589 aa12□□□□□ -0.49
PBX1-212ENST00000540236 TSKSQ9UJT2 592 aa12□□□□□ -0.49
PBX1-212ENST00000540236 RNF17Q9BXT8 1623 aaKnown RBP12□□□□□ -0.49
PBX1-212ENST00000540236 CCDC195A0A1B0GUA6 201 aa12□□□□□ -0.49
PBX1-212ENST00000540236 FGGP02679 453 aa12□□□□□ -0.49
PBX1-212ENST00000540236 DR1Q01658 176 aa12□□□□□ -0.49
PBX1-212ENST00000540236 THOC5Q13769 683 aaKnown RBP12□□□□□ -0.49
PBX1-212ENST00000540236 ILDR1Q86SU0 546 aaPredicted RBP12□□□□□ -0.49
PBX1-212ENST00000540236 LACRTQ9GZZ8 138 aa12□□□□□ -0.49
PBX1-212ENST00000540236 TRIM43BA6NCK2 446 aa12□□□□□ -0.49
PBX1-212ENST00000540236 FOXO6A8MYZ6 492 aa12□□□□□ -0.49
PBX1-212ENST00000540236 FUT4P22083 530 aa12□□□□□ -0.49
PBX1-212ENST00000540236 EPHB2P29323 1055 aa12□□□□□ -0.49
PBX1-212ENST00000540236 DNM2P50570 870 aa12□□□□□ -0.49
PBX1-212ENST00000540236 ATP1A4Q13733 1029 aa12□□□□□ -0.49
PBX1-212ENST00000540236 LRRC37BQ96QE4 947 aa12□□□□□ -0.49
PBX1-212ENST00000540236 CNOT8Q9UFF9 292 aaKnown RBP12□□□□□ -0.49
PBX1-212ENST00000540236 ALOX15P16050 662 aaPredicted RBP12□□□□□ -0.49
PBX1-212ENST00000540236 ADARP55265 1226 aaKnown RBP12□□□□□ -0.49
PBX1-212ENST00000540236 ITGB3BPQ13352 177 aaPredicted RBP12□□□□□ -0.49
PBX1-212ENST00000540236 CCDC152Q4G0S7 254 aa12□□□□□ -0.49
PBX1-212ENST00000540236 ZNF653Q96CK0 615 aa12□□□□□ -0.49
PBX1-212ENST00000540236 NPHS2Q9NP85 383 aa12□□□□□ -0.49
PBX1-212ENST00000540236 STOML1Q9UBI4 398 aa12□□□□□ -0.49
PBX1-212ENST00000540236 SAMD9Q5K651 1589 aa12□□□□□ -0.49
PBX1-212ENST00000540236 MAPK13O15264 365 aa12□□□□□ -0.49
PBX1-212ENST00000540236 MPP3Q13368 585 aa12□□□□□ -0.49
PBX1-212ENST00000540236 BIRC3Q13489 604 aa12□□□□□ -0.49
PBX1-212ENST00000540236 NEK9Q8TD19 979 aa12□□□□□ -0.49
PBX1-212ENST00000540236 PIGOQ8TEQ8 1089 aa12□□□□□ -0.49
PBX1-212ENST00000540236 ZBTB3Q9H5J0 574 aa12□□□□□ -0.49
PBX1-212ENST00000540236 ANGEL1Q9UNK9 670 aaKnown RBP12□□□□□ -0.49
PBX1-212ENST00000540236 R3HDM2Q9Y2K5 976 aaKnown RBP12□□□□□ -0.49
PBX1-212ENST00000540236 CAPN9O14815 690 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 SHOX2O60902 331 aaPredicted RBP11.99□□□□□ -0.49
PBX1-212ENST00000540236 ZBED6P86452 979 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 IFIT1BQ5T764 474 aaKnown RBP11.99□□□□□ -0.49
PBX1-212ENST00000540236 C1orf146Q5VVC0 180 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 DDX12PQ92771 950 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 ANGPTL2Q9UKU9 493 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 IQGAP2Q13576 1575 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 FAM205CA6NFA0 338 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 LDHAP00338 332 aaKnown RBP11.99□□□□□ -0.49
PBX1-212ENST00000540236 CACNB1Q02641 598 aaPredicted RBP11.99□□□□□ -0.49
PBX1-212ENST00000540236 RASGRP4Q8TDF6 673 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 CNBD2Q96M20 576 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 UBN1Q9NPG3 1134 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 RAPGEF3O95398 923 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 SPRED3Q2MJR0 410 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 PPP1R21Q6ZMI0 780 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 ARMT1Q9H993 441 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 RWDD2AQ9UIY3 292 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 XPO1O14980 1071 aaKnown RBP11.99□□□□□ -0.49
PBX1-212ENST00000540236 TMCC1O94876 653 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 ARL1P40616 181 aaPredicted RBP11.99□□□□□ -0.49
PBX1-212ENST00000540236 PHEXP78562 749 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 IL9RQ01113 521 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 PTGDRQ13258 359 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 DTHD1Q6ZMT9 781 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 LIMA1Q9UHB6 759 aaKnown RBP11.99□□□□□ -0.49
PBX1-212ENST00000540236 AMFRQ9UKV5 643 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 SYCP2Q9BX26 1530 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 ATP10DQ9P241 1426 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms