RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 KAT2BQ92831 832 aa15.27■□□□□ 0.04
CCDC130-202ENST00000540216 KCNH7Q9NS40 1196 aa15.27■□□□□ 0.04
CCDC130-202ENST00000540216 ORC3Q9UBD5 711 aaPredicted RBP15.27■□□□□ 0.04
CCDC130-202ENST00000540216 HAS3O00219 553 aa15.26■□□□□ 0.03
CCDC130-202ENST00000540216 MEIS1O00470 390 aa15.26■□□□□ 0.03
CCDC130-202ENST00000540216 LARGE1O95461 756 aa15.26■□□□□ 0.03
CCDC130-202ENST00000540216 TIMP1P01033 207 aa15.26■□□□□ 0.03
CCDC130-202ENST00000540216 ZNF286BP0CG31 522 aa15.26■□□□□ 0.03
CCDC130-202ENST00000540216 ZNF76P36508 570 aa15.26■□□□□ 0.03
CCDC130-202ENST00000540216 SETQ01105 290 aaPredicted RBP15.26■□□□□ 0.03
CCDC130-202ENST00000540216 MFSD10Q14728 455 aa15.26■□□□□ 0.03
CCDC130-202ENST00000540216 FAM47CQ5HY64 1035 aa15.26■□□□□ 0.03
CCDC130-202ENST00000540216 BLIDQ8IZY5 108 aa15.26■□□□□ 0.03
CCDC130-202ENST00000540216 NECAB1Q8N987 351 aa15.26■□□□□ 0.03
CCDC130-202ENST00000540216 BADQ92934 168 aa15.26■□□□□ 0.03
CCDC130-202ENST00000540216 ZSCAN31Q96LW9 406 aaPredicted RBP15.26■□□□□ 0.03
CCDC130-202ENST00000540216 GPR20Q99678 358 aa15.26■□□□□ 0.03
CCDC130-202ENST00000540216 NFASCO94856 1347 aa15.25■□□□□ 0.03
CCDC130-202ENST00000540216 SORBS3O60504 671 aa15.25■□□□□ 0.03
CCDC130-202ENST00000540216 ATP9AO75110 1047 aa15.25■□□□□ 0.03
CCDC130-202ENST00000540216 LGALS2P05162 132 aa15.25■□□□□ 0.03
CCDC130-202ENST00000540216 ITGB8P26012 769 aa15.25■□□□□ 0.03
CCDC130-202ENST00000540216 CIITAP33076 1130 aa15.25■□□□□ 0.03
CCDC130-202ENST00000540216 PSEN2P49810 448 aa15.25■□□□□ 0.03
CCDC130-202ENST00000540216 KIAA0753Q2KHM9 967 aa15.25■□□□□ 0.03
CCDC130-202ENST00000540216 MFSD5Q6N075 450 aa15.25■□□□□ 0.03
CCDC130-202ENST00000540216 TDHQ8IZJ6 230 aa15.25■□□□□ 0.03
CCDC130-202ENST00000540216 C7orf31Q8N865 590 aa15.25■□□□□ 0.03
CCDC130-202ENST00000540216 RASGRP4Q8TDF6 673 aa15.25■□□□□ 0.03
CCDC130-202ENST00000540216 AIFM3Q96NN9 605 aa15.25■□□□□ 0.03
CCDC130-202ENST00000540216 SDF4Q9BRK5 362 aa15.25■□□□□ 0.03
CCDC130-202ENST00000540216 C16orf70Q9BSU1 422 aa15.25■□□□□ 0.03
CCDC130-202ENST00000540216 TRPV6Q9H1D0 765 aa15.25■□□□□ 0.03
CCDC130-202ENST00000540216 HIPK3Q9H422 1215 aa15.25■□□□□ 0.03
CCDC130-202ENST00000540216 JPH1Q9HDC5 661 aaPredicted RBP15.25■□□□□ 0.03
CCDC130-202ENST00000540216 SH2B1Q9NRF2 756 aaPredicted RBP15.25■□□□□ 0.03
CCDC130-202ENST00000540216 TRMT13Q9NUP7 481 aaKnown RBP15.25■□□□□ 0.03
CCDC130-202ENST00000540216 ZNF215Q9UL58 517 aaPredicted RBP15.25■□□□□ 0.03
CCDC130-202ENST00000540216 GTF3C3Q9Y5Q9 886 aa15.25■□□□□ 0.03
CCDC130-202ENST00000540216 IGLV3-22A0A075B6J6 115 aa15.24■□□□□ 0.03
CCDC130-202ENST00000540216 H3BRB1 525 aa15.24■□□□□ 0.03
CCDC130-202ENST00000540216 M0R2N6 131 aa15.24■□□□□ 0.03
CCDC130-202ENST00000540216 ADAMTS3O15072 1205 aa15.24■□□□□ 0.03
CCDC130-202ENST00000540216 ST18O60284 1047 aa15.24■□□□□ 0.03
CCDC130-202ENST00000540216 USP11P51784 963 aa15.24■□□□□ 0.03
CCDC130-202ENST00000540216 FPGSQ05932 587 aa15.24■□□□□ 0.03
CCDC130-202ENST00000540216 NPY5RQ15761 445 aa15.24■□□□□ 0.03
CCDC130-202ENST00000540216 KRT25Q7Z3Z0 450 aa15.24■□□□□ 0.03
CCDC130-202ENST00000540216 PLA2G4DQ86XP0 818 aa15.24■□□□□ 0.03
CCDC130-202ENST00000540216 TMEM199Q8N511 208 aa15.24■□□□□ 0.03
CCDC130-202ENST00000540216 NSUN7Q8NE18 718 aaKnown RBP15.24■□□□□ 0.03
CCDC130-202ENST00000540216 CYP2W1Q8TAV3 490 aa15.24■□□□□ 0.03
CCDC130-202ENST00000540216 SEPT1Q8WYJ6 367 aa15.24■□□□□ 0.03
CCDC130-202ENST00000540216 TBC1D32Q96NH3 1257 aa15.24■□□□□ 0.03
CCDC130-202ENST00000540216 LLPHQ9BRT6 129 aaKnown RBP15.24■□□□□ 0.03
CCDC130-202ENST00000540216 ALG1Q9BT22 464 aa15.24■□□□□ 0.03
CCDC130-202ENST00000540216 PHF20Q9BVI0 1012 aa15.24■□□□□ 0.03
CCDC130-202ENST00000540216 NOC4LQ9BVI4 516 aaKnown RBP15.24■□□□□ 0.03
CCDC130-202ENST00000540216 TUT1Q9H6E5 874 aaKnown RBP15.24■□□□□ 0.03
CCDC130-202ENST00000540216 BCAS3Q9H6U6 928 aa15.24■□□□□ 0.03
CCDC130-202ENST00000540216 AGO4Q9HCK5 861 aaKnown RBP15.24■□□□□ 0.03
CCDC130-202ENST00000540216 SLC9A2Q9UBY0 812 aa15.24■□□□□ 0.03
CCDC130-202ENST00000540216 GTF2IRD1Q9UHL9 959 aa15.24■□□□□ 0.03
CCDC130-202ENST00000540216 DOCK5Q9H7D0 1870 aa15.24■□□□□ 0.03
CCDC130-202ENST00000540216 FAM86B1E9PN63 330 aa15.23■□□□□ 0.03
CCDC130-202ENST00000540216 FAM86B2P0C5J1 330 aa15.23■□□□□ 0.03
CCDC130-202ENST00000540216 CHMP4BP1P59074 171 aa15.23■□□□□ 0.03
CCDC130-202ENST00000540216 PPIGQ13427 754 aaKnown RBP eCLIP15.23■□□□□ 0.035e-7■■■□□ 17.4
CCDC130-202ENST00000540216 PPP1R12CQ9BZL4 782 aa15.23■□□□□ 0.03
CCDC130-202ENST00000540216 PKD2L1Q9P0L9 805 aa15.23■□□□□ 0.03
CCDC130-202ENST00000540216 NOD1Q9Y239 953 aa15.23■□□□□ 0.03
CCDC130-202ENST00000540216 PITPNM1O00562 1244 aa15.22■□□□□ 0.03
CCDC130-202ENST00000540216 ARP10275 920 aa15.22■□□□□ 0.03
CCDC130-202ENST00000540216 FDPSP14324 419 aaKnown RBP15.22■□□□□ 0.03
CCDC130-202ENST00000540216 TCF7P36402 384 aaPredicted RBP15.22■□□□□ 0.03
CCDC130-202ENST00000540216 SP4Q02446 784 aa15.22■□□□□ 0.03
CCDC130-202ENST00000540216 ST3GAL1Q11201 340 aa15.22■□□□□ 0.03
CCDC130-202ENST00000540216 BFSP2Q13515 415 aa15.22■□□□□ 0.03
CCDC130-202ENST00000540216 NONOQ15233 471 aaKnown RBP eCLIP15.22■□□□□ 0.03
CCDC130-202ENST00000540216 PTGISQ16647 500 aa15.22■□□□□ 0.03
CCDC130-202ENST00000540216 GDF6Q6KF10 455 aaPredicted RBP15.22■□□□□ 0.03
CCDC130-202ENST00000540216 CCDC155Q8N6L0 562 aa15.22■□□□□ 0.03
CCDC130-202ENST00000540216 BRMS1Q9HCU9 246 aa15.22■□□□□ 0.03
CCDC130-202ENST00000540216 HDAC6Q9UBN7 1215 aa15.22■□□□□ 0.03
CCDC130-202ENST00000540216 KCNJ14Q9UNX9 436 aa15.22■□□□□ 0.03
CCDC130-202ENST00000540216 EMSYQ7Z589 1322 aa15.21■□□□□ 0.03
CCDC130-202ENST00000540216 CCDC194A0A1B0GVG4 234 aa15.21■□□□□ 0.03
CCDC130-202ENST00000540216 IPO5O00410 1097 aaKnown RBP15.21■□□□□ 0.03
CCDC130-202ENST00000540216 CYP2C9P11712 490 aa15.21■□□□□ 0.03
CCDC130-202ENST00000540216 HOXC8P31273 242 aa15.21■□□□□ 0.03
CCDC130-202ENST00000540216 ACTR2P61160 394 aa15.21■□□□□ 0.03
CCDC130-202ENST00000540216 HMGN5P82970 282 aaKnown RBP15.21■□□□□ 0.03
CCDC130-202ENST00000540216 ITGB3BPQ13352 177 aaPredicted RBP15.21■□□□□ 0.03
CCDC130-202ENST00000540216 TRIM29Q14134 588 aa15.21■□□□□ 0.03
CCDC130-202ENST00000540216 LRIT3Q3SXY7 679 aa15.21■□□□□ 0.03
CCDC130-202ENST00000540216 PRR16Q569H4 304 aa15.21■□□□□ 0.03
CCDC130-202ENST00000540216 MOXD1Q6UVY6 613 aa15.21■□□□□ 0.03
CCDC130-202ENST00000540216 CAGE1Q8TC20 777 aa15.21■□□□□ 0.03
CCDC130-202ENST00000540216 TBCKQ8TEA7 893 aa15.21■□□□□ 0.03
CCDC130-202ENST00000540216 ZNF577Q9BSK1 485 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms