RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 ZBED4O75132 1171 aa10.87□□□□□ -0.67
MDH1-215ENST00000539945 CFBP00751 764 aa10.87□□□□□ -0.67
MDH1-215ENST00000539945 IREB2P48200 963 aaKnown RBP10.87□□□□□ -0.67
MDH1-215ENST00000539945 HSD17B4P51659 736 aa10.87□□□□□ -0.67
MDH1-215ENST00000539945 HMGCS2P54868 508 aa10.87□□□□□ -0.67
MDH1-215ENST00000539945 SEMA3FQ13275 785 aa10.87□□□□□ -0.67
MDH1-215ENST00000539945 VGLL4Q14135 290 aa10.87□□□□□ -0.67
MDH1-215ENST00000539945 CT47A1Q5JQC4 288 aaPredicted RBP10.87□□□□□ -0.67
MDH1-215ENST00000539945 ISM2Q6H9L7 571 aa10.87□□□□□ -0.67
MDH1-215ENST00000539945 MCF2L2Q86YR7 1114 aa10.87□□□□□ -0.67
MDH1-215ENST00000539945 SLFN12Q8IYM2 578 aa10.87□□□□□ -0.67
MDH1-215ENST00000539945 RASSF8Q8NHQ8 419 aa10.87□□□□□ -0.67
MDH1-215ENST00000539945 TBC1D5Q92609 795 aa10.87□□□□□ -0.67
MDH1-215ENST00000539945 EHMT1Q9H9B1 1298 aa10.87□□□□□ -0.67
MDH1-215ENST00000539945 MAP3K20Q9NYL2 800 aaKnown RBP10.87□□□□□ -0.67
MDH1-215ENST00000539945 PCDHA12Q9UN75 941 aa10.87□□□□□ -0.67
MDH1-215ENST00000539945 ADAMTS5Q9UNA0 930 aa10.87□□□□□ -0.67
MDH1-215ENST00000539945 PARP14Q460N5 1801 aa10.87□□□□□ -0.67
MDH1-215ENST00000539945 SMTNL1A8MU46 457 aa10.86□□□□□ -0.67
MDH1-215ENST00000539945 VWA5AO00534 786 aa10.86□□□□□ -0.67
MDH1-215ENST00000539945 MARCH6O60337 910 aa10.86□□□□□ -0.67
MDH1-215ENST00000539945 PLCG1P19174 1290 aa10.86□□□□□ -0.67
MDH1-215ENST00000539945 NF2P35240 595 aa10.86□□□□□ -0.67
MDH1-215ENST00000539945 SMCPP49901 116 aaPredicted RBP10.86□□□□□ -0.67
MDH1-215ENST00000539945 OAZ1P54368 228 aa10.86□□□□□ -0.67
MDH1-215ENST00000539945 PRKG1Q13976 671 aa10.86□□□□□ -0.67
MDH1-215ENST00000539945 COG2Q14746 738 aa10.86□□□□□ -0.67
MDH1-215ENST00000539945 HS1BP3Q53T59 392 aa10.86□□□□□ -0.67
MDH1-215ENST00000539945 SARM1Q6SZW1 724 aa10.86□□□□□ -0.67
MDH1-215ENST00000539945 DLK2Q6UY11 383 aa10.86□□□□□ -0.67
MDH1-215ENST00000539945 FCHSD1Q86WN1 690 aa10.86□□□□□ -0.67
MDH1-215ENST00000539945 AOPEPQ8N6M6 819 aa10.86□□□□□ -0.67
MDH1-215ENST00000539945 ETNPPLQ8TBG4 499 aa10.86□□□□□ -0.67
MDH1-215ENST00000539945 CLEC4DQ8WXI8 215 aa10.86□□□□□ -0.67
MDH1-215ENST00000539945 LENG9Q96B70 501 aa10.86□□□□□ -0.67
MDH1-215ENST00000539945 CALML4Q96GE6 196 aa10.86□□□□□ -0.67
MDH1-215ENST00000539945 FAM20AQ96MK3 541 aa10.86□□□□□ -0.67
MDH1-215ENST00000539945 TAF1DQ9H5J8 278 aaPredicted RBP10.86□□□□□ -0.67
MDH1-215ENST00000539945 KBTBD4Q9NVX7 518 aa10.86□□□□□ -0.67
MDH1-215ENST00000539945 TMOD4Q9NZQ9 345 aa10.86□□□□□ -0.67
MDH1-215ENST00000539945 GMPR2Q9P2T1 348 aaKnown RBP10.86□□□□□ -0.67
MDH1-215ENST00000539945 DACH1Q9UI36 760 aa10.86□□□□□ -0.67
MDH1-215ENST00000539945 RABGAP1Q9Y3P9 1069 aa10.86□□□□□ -0.67
MDH1-215ENST00000539945 CTDP1Q9Y5B0 961 aaPredicted RBP10.86□□□□□ -0.67
MDH1-215ENST00000539945 CSADQ9Y600 493 aa10.86□□□□□ -0.67
MDH1-215ENST00000539945 MYPNQ86TC9 1320 aa10.86□□□□□ -0.67
MDH1-215ENST00000539945 RLFQ13129 1914 aa10.86□□□□□ -0.67
MDH1-215ENST00000539945 FAM86B1E9PN63 330 aa10.85□□□□□ -0.67
MDH1-215ENST00000539945 FAM86B2P0C5J1 330 aa10.85□□□□□ -0.67
MDH1-215ENST00000539945 NCAPHQ15003 741 aa10.85□□□□□ -0.67
MDH1-215ENST00000539945 PRR16Q569H4 304 aa10.85□□□□□ -0.67
MDH1-215ENST00000539945 KRT79Q5XKE5 535 aa10.85□□□□□ -0.67
MDH1-215ENST00000539945 CATSPERGQ6ZRH7 1159 aa10.85□□□□□ -0.67
MDH1-215ENST00000539945 PNMA8AQ86V59 439 aaPredicted RBP10.85□□□□□ -0.67
MDH1-215ENST00000539945 REPS2Q8NFH8 660 aa10.85□□□□□ -0.67
MDH1-215ENST00000539945 ATG4CQ96DT6 458 aa10.85□□□□□ -0.67
MDH1-215ENST00000539945 TRIM44Q96DX7 344 aaPredicted RBP10.85□□□□□ -0.67
MDH1-215ENST00000539945 CDCA5Q96FF9 252 aa10.85□□□□□ -0.67
MDH1-215ENST00000539945 RAVER2Q9HCJ3 691 aaKnown RBP10.85□□□□□ -0.67
MDH1-215ENST00000539945 RMND1Q9NWS8 449 aa10.85□□□□□ -0.67
MDH1-215ENST00000539945 TOR4AQ9NXH8 423 aa10.85□□□□□ -0.67
MDH1-215ENST00000539945 OTOFQ9HC10 1997 aa10.85□□□□□ -0.67
MDH1-215ENST00000539945 IGLV3-22A0A075B6J6 115 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 ATP2A1O14983 1001 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 SLC10A3P09131 477 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 ALAS1P13196 640 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 ERCC5P28715 1186 aaPredicted RBP10.84□□□□□ -0.67
MDH1-215ENST00000539945 CASP1P29466 404 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 ZNF76P36508 570 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 ZNF75DP51815 510 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 TPM4P67936 248 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 PLCB2Q00722 1185 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 MYL5Q02045 173 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 PPATQ06203 517 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 GRB10Q13322 594 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 CUL4BQ13620 913 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 TMEM119Q4V9L6 283 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 HYIQ5T013 277 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 PLA2G4DQ86XP0 818 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 ERO1BQ86YB8 467 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 ANKRD13AQ8IZ07 590 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 CPXCR1Q8N123 301 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 LRRC15Q8TF66 581 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 STAMQ92783 540 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 PNMA5Q96PV4 448 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 MAF1Q9H063 256 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 HOXC10Q9NYD6 342 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 RPTORQ8N122 1335 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 WDR90Q96KV7 1748 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 UTRNP46939 3433 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 NFIBO00712 420 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 MSH4O15457 936 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 RPN1P04843 607 aaKnown RBP10.84□□□□□ -0.67
MDH1-215ENST00000539945 AMPD3Q01432 767 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 SPIRE1Q08AE8 756 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 KCNB1Q14721 858 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 CEP55Q53EZ4 464 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.84□□□□□ -0.67
MDH1-215ENST00000539945 SNX29Q8TEQ0 813 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 CDK5RAP3Q96JB5 506 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms