RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 GPKOWQ92917 476 aaPredicted RBP eCLIP8.57□□□□□ -1.04
CCDC60-204ENST00000539847 SHISA4Q96DD7 197 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 ZNF512BQ96KM6 892 aaPredicted RBP8.57□□□□□ -1.04
CCDC60-204ENST00000539847 TRIM47Q96LD4 638 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 CEP89Q96ST8 783 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 SEC62Q99442 399 aaKnown RBP8.57□□□□□ -1.04
CCDC60-204ENST00000539847 ARHGAP9Q9BRR9 750 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 TACO1Q9BSH4 297 aaKnown RBP8.57□□□□□ -1.04
CCDC60-204ENST00000539847 LRRC2Q9BYS8 371 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 ARHGAP39Q9C0H5 1083 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 UNC93B1Q9H1C4 597 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 NCOA5Q9HCD5 579 aaKnown RBP8.57□□□□□ -1.04
CCDC60-204ENST00000539847 CEP131Q9UPN4 1083 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 KLF18A0A0U1RQI7 1052 aa8.56□□□□□ -1.04
CCDC60-204ENST00000539847 PDHXO00330 501 aa8.56□□□□□ -1.04
CCDC60-204ENST00000539847 BMP15O95972 392 aa8.56□□□□□ -1.04
CCDC60-204ENST00000539847 IFIT1P09914 478 aaKnown RBP8.56□□□□□ -1.04
CCDC60-204ENST00000539847 BCRP11274 1271 aa8.56□□□□□ -1.04
CCDC60-204ENST00000539847 LIFRP42702 1097 aa8.56□□□□□ -1.04
CCDC60-204ENST00000539847 GTF2A1P52655 376 aaPredicted RBP8.56□□□□□ -1.04
CCDC60-204ENST00000539847 FCGRTP55899 365 aa8.56□□□□□ -1.04
CCDC60-204ENST00000539847 GUCY1B3Q02153 619 aa8.56□□□□□ -1.04
CCDC60-204ENST00000539847 SPAG1Q07617 926 aa8.56□□□□□ -1.04
CCDC60-204ENST00000539847 DPYDQ12882 1025 aa8.56□□□□□ -1.04
CCDC60-204ENST00000539847 CASP8Q14790 479 aa8.56□□□□□ -1.04
CCDC60-204ENST00000539847 POSTNQ15063 836 aa8.56□□□□□ -1.04
CCDC60-204ENST00000539847 PPP2R5BQ15173 497 aa8.56□□□□□ -1.04
CCDC60-204ENST00000539847 PUM3Q15397 648 aaKnown RBP8.56□□□□□ -1.04
CCDC60-204ENST00000539847 RILPL1Q5EBL4 403 aa8.56□□□□□ -1.04
CCDC60-204ENST00000539847 DNAJC21Q5F1R6 531 aaKnown RBP8.56□□□□□ -1.04
CCDC60-204ENST00000539847 KRT40Q6A162 431 aa8.56□□□□□ -1.04
CCDC60-204ENST00000539847 TMED8Q6PL24 325 aaPredicted RBP8.56□□□□□ -1.04
CCDC60-204ENST00000539847 TOGARAM2Q6ZUX3 1019 aa8.56□□□□□ -1.04
CCDC60-204ENST00000539847 ATG9AQ7Z3C6 839 aa8.56□□□□□ -1.04
CCDC60-204ENST00000539847 SGMS1Q86VZ5 419 aa8.56□□□□□ -1.04
CCDC60-204ENST00000539847 ZKSCAN4Q969J2 545 aaPredicted RBP8.56□□□□□ -1.04
CCDC60-204ENST00000539847 EDC3Q96F86 508 aaKnown RBP8.56□□□□□ -1.04
CCDC60-204ENST00000539847 NAPGQ99747 312 aaPredicted RBP8.56□□□□□ -1.04
CCDC60-204ENST00000539847 PYM1Q9BRP8 204 aaKnown RBP8.56□□□□□ -1.04
CCDC60-204ENST00000539847 ALG1Q9BT22 464 aa8.56□□□□□ -1.04
CCDC60-204ENST00000539847 PUS3Q9BZE2 481 aaKnown RBP8.56□□□□□ -1.04
CCDC60-204ENST00000539847 FOXP1Q9H334 677 aaPredicted RBP8.56□□□□□ -1.04
CCDC60-204ENST00000539847 PDE11AQ9HCR9 933 aa8.56□□□□□ -1.04
CCDC60-204ENST00000539847 ABCB6Q9NP58 842 aa8.56□□□□□ -1.04
CCDC60-204ENST00000539847 MAN1B1Q9UKM7 699 aa8.56□□□□□ -1.04
CCDC60-204ENST00000539847 AKAP2Q9Y2D5 859 aa8.56□□□□□ -1.04
CCDC60-204ENST00000539847 JRKLQ9Y4A0 524 aa8.56□□□□□ -1.04
CCDC60-204ENST00000539847 NID2Q14112 1375 aa8.56□□□□□ -1.04
CCDC60-204ENST00000539847 SZT2Q5T011 3432 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 MYPNQ86TC9 1320 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 A0A087WWV3 80 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 ANKRD33BA6NCL7 494 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 GOLGA8BA8MQT2 603 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 EIF3CLB5ME19 914 aaKnown RBP8.55□□□□□ -1.04
CCDC60-204ENST00000539847 KIF28PB7ZC32 967 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 TMEM232C9JQI7 657 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 EYA2O00167 538 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 GOLIM4O00461 696 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 ZNF213O14771 459 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 SHOX2O60902 331 aaPredicted RBP8.55□□□□□ -1.04
CCDC60-204ENST00000539847 FGAP02671 866 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 CCL5P13501 91 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 TCF3P15923 654 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 FGFR2P21802 821 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 TRDNQ13061 729 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 MOGSQ13724 837 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 TRIM29Q14134 588 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 GRIK5Q16478 980 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 EML3Q32P44 896 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 LONRF3Q496Y0 759 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 METTL24Q5JXM2 366 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 GBP6Q6ZN66 633 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 SH3BP5LQ7L8J4 393 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 FASTKD5Q7L8L6 764 aaKnown RBP8.55□□□□□ -1.04
CCDC60-204ENST00000539847 APTXQ7Z2E3 356 aaKnown RBP8.55□□□□□ -1.04
CCDC60-204ENST00000539847 RALYLQ86SE5 291 aaKnown RBP8.55□□□□□ -1.04
CCDC60-204ENST00000539847 SPATS2Q86XZ4 545 aaKnown RBP8.55□□□□□ -1.04
CCDC60-204ENST00000539847 NPAS4Q8IUM7 802 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 C10orf67Q8IYJ2 551 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 PDILTQ8N807 584 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 APPBP2Q92624 585 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 DPF3Q92784 378 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 EIF3CQ99613 913 aaKnown RBP8.55□□□□□ -1.04
CCDC60-204ENST00000539847 DEF6Q9H4E7 631 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 ADD3Q9UEY8 706 aaKnown RBP8.55□□□□□ -1.04
CCDC60-204ENST00000539847 NFE2L3Q9Y4A8 694 aa8.55□□□□□ -1.04
CCDC60-204ENST00000539847 SRPRBQ9Y5M8 271 aaKnown RBP8.55□□□□□ -1.04
CCDC60-204ENST00000539847 ATXN2Q99700 1313 aaKnown RBP8.54□□□□□ -1.04
CCDC60-204ENST00000539847 VGLL3A8MV65 326 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 FARP2O94887 1054 aaPredicted RBP8.54□□□□□ -1.04
CCDC60-204ENST00000539847 ATP2B1P20020 1258 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 BMP6P22004 513 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 INPP5BP32019 993 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 USP8P40818 1118 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 USP14P54578 494 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 PTPN5P54829 565 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 ANTXR2P58335 489 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 AMPD2Q01433 879 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 MAP3K10Q02779 954 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 ITIH3Q06033 890 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms