RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 SLC44A5Q8NCS7 719 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 TAF4BQ92750 862 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 CEP95Q96GE4 821 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 YY1AP1Q9H869 796 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 EPB41L5Q9HCM4 733 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 PANK4Q9NVE7 773 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 TMEM59LQ9UK28 342 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 TAF1P21675 1872 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 PITPNM2Q9BZ72 1349 aa14.58□□□□□ -0.07
UBE3B-209ENST00000539584 NDUFAB1O14561 156 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 ZPR1O75312 459 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 GLI1P08151 1106 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 PDHBP11177 359 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 MRPL12P52815 198 aaKnown RBP14.58□□□□□ -0.08
UBE3B-209ENST00000539584 GRAPQ13588 217 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 BICDL1Q6ZP65 573 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 MICALL1Q8N3F8 863 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 GRAPLQ8TC17 118 aaPredicted RBP14.58□□□□□ -0.08
UBE3B-209ENST00000539584 INPP4AQ96PE3 977 aaPredicted RBP14.58□□□□□ -0.08
UBE3B-209ENST00000539584 PLCB1Q9NQ66 1216 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 ANKIB1Q9P2G1 1089 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 STK24Q9Y6E0 443 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 PNMA6FA0A0J9YX94 578 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 BUB1O43683 1085 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 SLC37A4O43826 429 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 MYBP10242 640 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 INPP5BP32019 993 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 HSPA9P38646 679 aaKnown RBP14.58□□□□□ -0.08
UBE3B-209ENST00000539584 BTDP43251 543 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 GUCY2DQ02846 1103 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 KLHL30Q0D2K2 578 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 SLC4A8Q2Y0W8 1093 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 TEX11Q8IYF3 940 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 USP38Q8NB14 1042 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 ARL8AQ96BM9 186 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 LRRC45Q96CN5 670 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 CCDC43Q96MW1 224 aaKnown RBP14.58□□□□□ -0.08
UBE3B-209ENST00000539584 CEP89Q96ST8 783 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 ISCUQ9H1K1 167 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 EPN3Q9H201 632 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 MTMR7Q9Y216 660 aa14.58□□□□□ -0.08
UBE3B-209ENST00000539584 AHDC1Q5TGY3 1603 aaPredicted RBP14.57□□□□□ -0.08
UBE3B-209ENST00000539584 SPATA31A5Q5VU36 1347 aa14.57□□□□□ -0.08
UBE3B-209ENST00000539584 SPATA31A7Q8IWB4 1347 aa14.57□□□□□ -0.08
UBE3B-209ENST00000539584 GOLGA6L10A6NI86 522 aa14.57□□□□□ -0.08
UBE3B-209ENST00000539584 NCK2O43639 380 aa14.57□□□□□ -0.08
UBE3B-209ENST00000539584 TLR2O60603 784 aa14.57□□□□□ -0.08
UBE3B-209ENST00000539584 KIAA0754O94854 1291 aa14.57□□□□□ -0.08
UBE3B-209ENST00000539584 CARSP49589 748 aaKnown RBP14.57□□□□□ -0.08
UBE3B-209ENST00000539584 CLK2P49760 499 aaKnown RBP14.57□□□□□ -0.08
UBE3B-209ENST00000539584 POLR2FP61218 127 aaKnown RBP14.57□□□□□ -0.08
UBE3B-209ENST00000539584 DIXDC1Q155Q3 683 aa14.57□□□□□ -0.08
UBE3B-209ENST00000539584 ASIC2Q16515 512 aa14.57□□□□□ -0.08
UBE3B-209ENST00000539584 KIAA0753Q2KHM9 967 aa14.57□□□□□ -0.08
UBE3B-209ENST00000539584 SWT1Q5T5J6 900 aaKnown RBP14.57□□□□□ -0.08
UBE3B-209ENST00000539584 ACTRT1Q8TDG2 376 aa14.57□□□□□ -0.08
UBE3B-209ENST00000539584 LMBR1Q8WVP7 490 aa14.57□□□□□ -0.08
UBE3B-209ENST00000539584 TBC1D5Q92609 795 aa14.57□□□□□ -0.08
UBE3B-209ENST00000539584 ZBTB9Q96C00 473 aa14.57□□□□□ -0.08
UBE3B-209ENST00000539584 ZFP91Q96JP5 570 aaPredicted RBP14.57□□□□□ -0.08
UBE3B-209ENST00000539584 ATP6V1G3Q96LB4 118 aa14.57□□□□□ -0.08
UBE3B-209ENST00000539584 LSM14BQ9BX40 385 aaKnown RBP14.57□□□□□ -0.08
UBE3B-209ENST00000539584 TAF1DQ9H5J8 278 aaPredicted RBP14.57□□□□□ -0.08
UBE3B-209ENST00000539584 DDX25Q9UHL0 483 aaKnown RBP14.57□□□□□ -0.08
UBE3B-209ENST00000539584 FBXL5Q9UKA1 691 aa14.57□□□□□ -0.08
UBE3B-209ENST00000539584 NFU1Q9UMS0 254 aa14.57□□□□□ -0.08
UBE3B-209ENST00000539584 PCDHA12Q9UN75 941 aa14.57□□□□□ -0.08
UBE3B-209ENST00000539584 MYO3BQ8WXR4 1341 aa14.57□□□□□ -0.08
UBE3B-209ENST00000539584 POTEMA6NI47 508 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 CCDC188H7C350 402 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 CETN3O15182 167 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 TDP2O95551 362 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 KLRC1P26715 233 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 EPS15P42566 896 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 RPS6KA1Q15418 735 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 ANKRD13CQ8N6S4 541 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 TBC1D22AQ8WUA7 517 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 CUL5Q93034 780 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 PSMB7Q99436 277 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 MXD3Q9BW11 206 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 PLEKHA4Q9H4M7 779 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 VAT1LQ9HCJ6 419 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 NLRC4Q9NPP4 1024 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 TMEM260Q9NX78 707 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 FRMD3A2A2Y4 597 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 ZNF233A6NK53 670 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 USP17L5A8MUK1 530 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 NR1D1P20393 614 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 USP11P51784 963 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 GTF2A1P52655 376 aaPredicted RBP14.56□□□□□ -0.08
UBE3B-209ENST00000539584 DDX60LQ5H9U9 1706 aaKnown RBP14.56□□□□□ -0.08
UBE3B-209ENST00000539584 MCTP2Q6DN12 878 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 FRMD5Q7Z6J6 570 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 NRAPQ86VF7 1730 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 KCTD17Q8N5Z5 321 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 MTMR4Q9NYA4 1195 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 SAP30BPQ9UHR5 308 aaKnown RBP14.56□□□□□ -0.08
UBE3B-209ENST00000539584 INTUQ9ULD6 942 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 PCDHA2Q9Y5H9 948 aa14.56□□□□□ -0.08
UBE3B-209ENST00000539584 ATAD5Q96QE3 1844 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms