RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 PPP4R3AQ6IN85 833 aa10.65□□□□□ -0.7
CDH13-204ENST00000539548 C15orf52Q6ZUT6 534 aaKnown RBP10.65□□□□□ -0.7
CDH13-204ENST00000539548 MICALL1Q8N3F8 863 aa10.65□□□□□ -0.7
CDH13-204ENST00000539548 GLIS3Q8NEA6 775 aa10.65□□□□□ -0.7
CDH13-204ENST00000539548 WHAMMQ8TF30 809 aa10.65□□□□□ -0.7
CDH13-204ENST00000539548 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.65□□□□□ -0.7
CDH13-204ENST00000539548 CCDC43Q96MW1 224 aaKnown RBP10.65□□□□□ -0.7
CDH13-204ENST00000539548 UBA5Q9GZZ9 404 aa10.65□□□□□ -0.7
CDH13-204ENST00000539548 AIPL1Q9NZN9 384 aa10.65□□□□□ -0.7
CDH13-204ENST00000539548 FAM153AQ9UHL3 310 aa10.65□□□□□ -0.7
CDH13-204ENST00000539548 NRAPQ86VF7 1730 aa10.65□□□□□ -0.7
CDH13-204ENST00000539548 ATXN2Q99700 1313 aaKnown RBP10.65□□□□□ -0.7
CDH13-204ENST00000539548 ZNF233A6NK53 670 aa10.65□□□□□ -0.71
CDH13-204ENST00000539548 CES2O00748 559 aa10.65□□□□□ -0.71
CDH13-204ENST00000539548 ZEB2O60315 1214 aa10.65□□□□□ -0.71
CDH13-204ENST00000539548 ERLIN2O94905 339 aa10.65□□□□□ -0.71
CDH13-204ENST00000539548 KLRC1P26715 233 aa10.65□□□□□ -0.71
CDH13-204ENST00000539548 GUCY2DQ02846 1103 aa10.65□□□□□ -0.71
CDH13-204ENST00000539548 FAM26FQ5R3K3 315 aa10.65□□□□□ -0.71
CDH13-204ENST00000539548 ZNF804AQ7Z570 1209 aa10.65□□□□□ -0.71
CDH13-204ENST00000539548 SPATS2Q86XZ4 545 aaKnown RBP10.65□□□□□ -0.71
CDH13-204ENST00000539548 GPIHBP1Q8IV16 184 aa10.65□□□□□ -0.71
CDH13-204ENST00000539548 TRIM59Q8IWR1 403 aa10.65□□□□□ -0.71
CDH13-204ENST00000539548 SUGP1Q8IWZ8 645 aaKnown RBP10.65□□□□□ -0.71
CDH13-204ENST00000539548 EIF1ADQ8N9N8 165 aaKnown RBP10.65□□□□□ -0.71
CDH13-204ENST00000539548 PIK3R5Q8WYR1 880 aa10.65□□□□□ -0.71
CDH13-204ENST00000539548 TBC1D5Q92609 795 aa10.65□□□□□ -0.71
CDH13-204ENST00000539548 INPP4AQ96PE3 977 aaPredicted RBP10.65□□□□□ -0.71
CDH13-204ENST00000539548 LSM14BQ9BX40 385 aaKnown RBP10.65□□□□□ -0.71
CDH13-204ENST00000539548 PANK4Q9NVE7 773 aa10.65□□□□□ -0.71
CDH13-204ENST00000539548 ANKIB1Q9P2G1 1089 aa10.65□□□□□ -0.71
CDH13-204ENST00000539548 SPATA31A6Q5VVP1 1343 aa10.64□□□□□ -0.71
CDH13-204ENST00000539548 BTNL10A8MVZ5 291 aa10.64□□□□□ -0.71
CDH13-204ENST00000539548 MYBP10242 640 aa10.64□□□□□ -0.71
CDH13-204ENST00000539548 PDHBP11177 359 aa10.64□□□□□ -0.71
CDH13-204ENST00000539548 PLCG2P16885 1265 aa10.64□□□□□ -0.71
CDH13-204ENST00000539548 BTDP43251 543 aa10.64□□□□□ -0.71
CDH13-204ENST00000539548 POLR2FP61218 127 aaKnown RBP10.64□□□□□ -0.71
CDH13-204ENST00000539548 ECM1Q16610 540 aa10.64□□□□□ -0.71
CDH13-204ENST00000539548 HYIQ5T013 277 aa10.64□□□□□ -0.71
CDH13-204ENST00000539548 RC3H1Q5TC82 1133 aaKnown RBP10.64□□□□□ -0.71
CDH13-204ENST00000539548 MMS22LQ6ZRQ5 1243 aa10.64□□□□□ -0.71
CDH13-204ENST00000539548 TEX11Q8IYF3 940 aa10.64□□□□□ -0.71
CDH13-204ENST00000539548 CASKIN2Q8WXE0 1202 aa10.64□□□□□ -0.71
CDH13-204ENST00000539548 IFT81Q8WYA0 676 aa10.64□□□□□ -0.71
CDH13-204ENST00000539548 COA7Q96BR5 231 aa10.64□□□□□ -0.71
CDH13-204ENST00000539548 BMP2KQ9NSY1 1161 aaPredicted RBP10.64□□□□□ -0.71
CDH13-204ENST00000539548 A0A087X0T9 212 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 RPS6KA4O75676 772 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 FTCDO95954 541 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 KRT14P02533 472 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 FAM228BP0C875 321 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 ERCC3P19447 782 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 PDCLQ13371 301 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 ASPRV1Q53RT3 343 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 C10orf76Q5T2E6 689 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 TTC19Q6DKK2 380 aaPredicted RBP10.63□□□□□ -0.71
CDH13-204ENST00000539548 PPP1R18Q6NYC8 613 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 TMC4Q7Z404 712 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 ZC3H3Q8IXZ2 948 aaKnown RBP10.63□□□□□ -0.71
CDH13-204ENST00000539548 CCDC24Q8N4L8 307 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 USP38Q8NB14 1042 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 KRT12Q99456 494 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 PAGR1Q9BTK6 254 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 SRP68Q9UHB9 627 aaKnown RBP10.63□□□□□ -0.71
CDH13-204ENST00000539548 TMEM59LQ9UK28 342 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 PCDHA2Q9Y5H9 948 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.63□□□□□ -0.71
CDH13-204ENST00000539548 TNRC6CQ9HCJ0 1690 aaKnown RBP10.63□□□□□ -0.71
CDH13-204ENST00000539548 MYH4Q9Y623 1939 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 NHSQ6T4R5 1651 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 SRRM3A6NNA2 597 aaPredicted RBP10.63□□□□□ -0.71
CDH13-204ENST00000539548 NDUFAB1O14561 156 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 SLC26A4O43511 780 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 SNHG28P0DPA3 235 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 INPP5BP32019 993 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 HSPA9P38646 679 aaKnown RBP10.63□□□□□ -0.71
CDH13-204ENST00000539548 LIG3P49916 1009 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 TNNC1P63316 161 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 KIAA0753Q2KHM9 967 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 MEX3CQ5U5Q3 659 aaKnown RBP10.63□□□□□ -0.71
CDH13-204ENST00000539548 KCTD16Q68DU8 428 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 ZNF772Q68DY9 489 aaPredicted RBP10.63□□□□□ -0.71
CDH13-204ENST00000539548 BARGINQ6ZT62 677 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 SMIM5Q71RC9 77 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 CCDC65Q8IXS2 484 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 SH2D3CQ8N5H7 860 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 HAS1Q92839 578 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 FAM163AQ96GL9 167 aaPredicted RBP10.63□□□□□ -0.71
CDH13-204ENST00000539548 NT5C3AQ9H0P0 336 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 EPN3Q9H201 632 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 SPATA31A5Q5VU36 1347 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 SPATA31A7Q8IWB4 1347 aa10.63□□□□□ -0.71
CDH13-204ENST00000539548 MYH7BA7E2Y1 1941 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 PNMA6FA0A0J9YX94 578 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 ESYT3A0FGR9 886 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 ZSCAN5CA6NGD5 496 aaPredicted RBP10.62□□□□□ -0.71
CDH13-204ENST00000539548 HMGB1P1B2RPK0 211 aaPredicted RBP10.62□□□□□ -0.71
CDH13-204ENST00000539548 ZPR1O75312 459 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 GUCY2CP25092 1073 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms