RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 ZNF577Q9BSK1 485 aa15.82■□□□□ 0.12
CACNB1-206ENST00000539338 CCDC85CA6NKD9 419 aa15.82■□□□□ 0.12
CACNB1-206ENST00000539338 PSMC2P35998 433 aaKnown RBP15.82■□□□□ 0.12
CACNB1-206ENST00000539338 ZBED6P86452 979 aa15.82■□□□□ 0.12
CACNB1-206ENST00000539338 TSNAXIP1Q2TAA8 658 aa15.82■□□□□ 0.12
CACNB1-206ENST00000539338 TCP11X2Q5H9J9 407 aa15.82■□□□□ 0.12
CACNB1-206ENST00000539338 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.82■□□□□ 0.12
CACNB1-206ENST00000539338 GPR101Q96P66 508 aaPredicted RBP15.82■□□□□ 0.12
CACNB1-206ENST00000539338 PANX2Q96RD6 677 aa15.82■□□□□ 0.12
CACNB1-206ENST00000539338 STK17AQ9UEE5 414 aa15.82■□□□□ 0.12
CACNB1-206ENST00000539338 ZNF148Q9UQR1 794 aa15.82■□□□□ 0.12
CACNB1-206ENST00000539338 ATP8B1O43520 1251 aa15.81■□□□□ 0.12
CACNB1-206ENST00000539338 P4HA1P13674 534 aa15.81■□□□□ 0.12
CACNB1-206ENST00000539338 PCIF1Q9H4Z3 704 aa15.81■□□□□ 0.12
CACNB1-206ENST00000539338 THAP9Q9H5L6 903 aa15.81■□□□□ 0.12
CACNB1-206ENST00000539338 IFNAR2P48551 515 aa15.81■□□□□ 0.12
CACNB1-206ENST00000539338 MMS19Q96T76 1030 aa15.81■□□□□ 0.12
CACNB1-206ENST00000539338 TROVE2P10155 538 aaKnown RBP eCLIP15.81■□□□□ 0.12
CACNB1-206ENST00000539338 EPHB4P54760 987 aa15.81■□□□□ 0.12
CACNB1-206ENST00000539338 CUL4BQ13620 913 aa15.81■□□□□ 0.12
CACNB1-206ENST00000539338 SARM1Q6SZW1 724 aa15.81■□□□□ 0.12
CACNB1-206ENST00000539338 ZBTB8OSQ8IWT0 167 aa15.81■□□□□ 0.12
CACNB1-206ENST00000539338 TBC1D31Q96DN5 1066 aa15.81■□□□□ 0.12
CACNB1-206ENST00000539338 PARK7Q99497 189 aaKnown RBP15.81■□□□□ 0.12
CACNB1-206ENST00000539338 PASKQ96RG2 1323 aa15.81■□□□□ 0.12
CACNB1-206ENST00000539338 SOCS7O14512 581 aa15.81■□□□□ 0.12
CACNB1-206ENST00000539338 HNRNPDLO14979 420 aaKnown RBP15.81■□□□□ 0.12
CACNB1-206ENST00000539338 GFPT2O94808 682 aa15.81■□□□□ 0.12
CACNB1-206ENST00000539338 POLGP54098 1239 aaPredicted RBP15.81■□□□□ 0.12
CACNB1-206ENST00000539338 DMTNQ08495 405 aa15.81■□□□□ 0.12
CACNB1-206ENST00000539338 ARHGAP24Q8N264 748 aa15.81■□□□□ 0.12
CACNB1-206ENST00000539338 DHX36Q9H2U1 1008 aaKnown RBP15.81■□□□□ 0.12
CACNB1-206ENST00000539338 TOGARAM2Q6ZUX3 1019 aa15.81■□□□□ 0.12
CACNB1-206ENST00000539338 KIF2CQ99661 725 aa15.81■□□□□ 0.12
CACNB1-206ENST00000539338 DDX23Q9BUQ8 820 aaKnown RBP15.81■□□□□ 0.12
CACNB1-206ENST00000539338 PLEKHG2Q9H7P9 1386 aa15.8■□□□□ 0.12
CACNB1-206ENST00000539338 CCDC151A5D8V7 595 aa15.8■□□□□ 0.12
CACNB1-206ENST00000539338 MYL1P05976 194 aa15.8■□□□□ 0.12
CACNB1-206ENST00000539338 HADHQ16836 314 aaKnown RBP15.8■□□□□ 0.12
CACNB1-206ENST00000539338 CCDC170Q8IYT3 715 aa15.8■□□□□ 0.12
CACNB1-206ENST00000539338 GTF3C2Q8WUA4 911 aaPredicted RBP15.8■□□□□ 0.12
CACNB1-206ENST00000539338 DISC1Q9NRI5 854 aa15.8■□□□□ 0.12
CACNB1-206ENST00000539338 EMILIN3Q9NT22 766 aa15.8■□□□□ 0.12
CACNB1-206ENST00000539338 AXIN2Q9Y2T1 843 aa15.8■□□□□ 0.12
CACNB1-206ENST00000539338 MFAP3LO75121 409 aa15.8■□□□□ 0.12
CACNB1-206ENST00000539338 TNNC2P02585 160 aa15.8■□□□□ 0.12
CACNB1-206ENST00000539338 CYP2D6P10635 497 aa15.8■□□□□ 0.12
CACNB1-206ENST00000539338 RPS12P25398 132 aaKnown RBP15.8■□□□□ 0.12
CACNB1-206ENST00000539338 PIK3CAP42336 1068 aa15.8■□□□□ 0.12
CACNB1-206ENST00000539338 GMNNO75496 209 aa15.8■□□□□ 0.12
CACNB1-206ENST00000539338 GCFC2P16383 781 aaKnown RBP15.8■□□□□ 0.12
CACNB1-206ENST00000539338 APBA1Q02410 837 aa15.8■□□□□ 0.12
CACNB1-206ENST00000539338 BFSP1Q12934 665 aa15.8■□□□□ 0.12
CACNB1-206ENST00000539338 CCDC144BQ3MJ40 725 aa15.8■□□□□ 0.12
CACNB1-206ENST00000539338 NDST4Q9H3R1 872 aa15.8■□□□□ 0.12
CACNB1-206ENST00000539338 DCCP43146 1447 aa15.8■□□□□ 0.12
CACNB1-206ENST00000539338 CEP170BQ9Y4F5 1589 aaPredicted RBP15.8■□□□□ 0.12
CACNB1-206ENST00000539338 PTPREP23469 700 aa15.8■□□□□ 0.12
CACNB1-206ENST00000539338 SLC7A5Q01650 507 aa15.8■□□□□ 0.12
CACNB1-206ENST00000539338 OXER1Q8TDS5 423 aa15.8■□□□□ 0.12
CACNB1-206ENST00000539338 NT5C1BQ96P26 610 aa15.8■□□□□ 0.12
CACNB1-206ENST00000539338 PCDHA13Q9Y5I0 950 aa15.8■□□□□ 0.12
CACNB1-206ENST00000539338 NOL3O60936 208 aaKnown RBP15.79■□□□□ 0.12
CACNB1-206ENST00000539338 PHBP35232 272 aa15.79■□□□□ 0.12
CACNB1-206ENST00000539338 MFAP3P55082 362 aa15.79■□□□□ 0.12
CACNB1-206ENST00000539338 FMR1NBQ8N0W7 255 aaPredicted RBP15.79■□□□□ 0.12
CACNB1-206ENST00000539338 MB21D1Q8N884 522 aa15.79■□□□□ 0.12
CACNB1-206ENST00000539338 PRDM5Q9NQX1 630 aaPredicted RBP15.79■□□□□ 0.12
CACNB1-206ENST00000539338 GCNT4Q9P109 453 aa15.79■□□□□ 0.12
CACNB1-206ENST00000539338 RNF17Q9BXT8 1623 aaKnown RBP15.79■□□□□ 0.12
CACNB1-206ENST00000539338 TMEM191BP0C7N4 346 aa15.79■□□□□ 0.12
CACNB1-206ENST00000539338 TMOD1P28289 359 aa15.79■□□□□ 0.12
CACNB1-206ENST00000539338 KIF11P52732 1056 aa15.79■□□□□ 0.12
CACNB1-206ENST00000539338 MRPS25P82663 173 aaKnown RBP15.79■□□□□ 0.12
CACNB1-206ENST00000539338 PTK2Q05397 1052 aa15.79■□□□□ 0.12
CACNB1-206ENST00000539338 ADCY1Q08828 1119 aa15.79■□□□□ 0.12
CACNB1-206ENST00000539338 STYK1Q6J9G0 422 aa15.79■□□□□ 0.12
CACNB1-206ENST00000539338 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.79■□□□□ 0.12
CACNB1-206ENST00000539338 MICAL1Q8TDZ2 1067 aa15.79■□□□□ 0.12
CACNB1-206ENST00000539338 ATP8A1Q9Y2Q0 1164 aa15.79■□□□□ 0.12
CACNB1-206ENST00000539338 ADGRB3O60242 1522 aa15.79■□□□□ 0.12
CACNB1-206ENST00000539338 MYO1FO00160 1098 aa15.79■□□□□ 0.12
CACNB1-206ENST00000539338 PLTPP55058 493 aa15.79■□□□□ 0.12
CACNB1-206ENST00000539338 SNX1Q13596 522 aa15.79■□□□□ 0.12
CACNB1-206ENST00000539338 SEPT14Q6ZU15 432 aa15.79■□□□□ 0.12
CACNB1-206ENST00000539338 STAG1Q8WVM7 1258 aa15.79■□□□□ 0.12
CACNB1-206ENST00000539338 ZNF653Q96CK0 615 aa15.79■□□□□ 0.12
CACNB1-206ENST00000539338 ABCB6Q9NP58 842 aa15.79■□□□□ 0.12
CACNB1-206ENST00000539338 TYW1Q9NV66 732 aaKnown RBP15.79■□□□□ 0.12
CACNB1-206ENST00000539338 COL15A1P39059 1388 aa15.79■□□□□ 0.12
CACNB1-206ENST00000539338 TXNDC9O14530 226 aa15.79■□□□□ 0.12
CACNB1-206ENST00000539338 PLA2G4BP0C869 781 aa15.79■□□□□ 0.12
CACNB1-206ENST00000539338 RNF10Q8N5U6 811 aaKnown RBP15.79■□□□□ 0.12
CACNB1-206ENST00000539338 JRKLQ9Y4A0 524 aa15.79■□□□□ 0.12
CACNB1-206ENST00000539338 DAAM1Q9Y4D1 1078 aa15.79■□□□□ 0.12
CACNB1-206ENST00000539338 PGRMC1O00264 195 aaKnown RBP15.78■□□□□ 0.12
CACNB1-206ENST00000539338 GAP43P17677 238 aa15.78■□□□□ 0.12
CACNB1-206ENST00000539338 CDK8P49336 464 aa15.78■□□□□ 0.12
CACNB1-206ENST00000539338 AOC3Q16853 763 aa15.78■□□□□ 0.12
CACNB1-206ENST00000539338 TMTC3Q6ZXV5 915 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms