RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	CEP55	Q53EZ4	464 aa		14.06	□□□□□ -0.16
CLTCL1-205	ENST00000538828	RASIP1	Q5U651	963 aa		14.06	□□□□□ -0.16
CLTCL1-205	ENST00000538828	REXO1	Q8N1G1	1221 aa	Known RBP	14.06	□□□□□ -0.16
CLTCL1-205	ENST00000538828	GPR20	Q99678	358 aa		14.06	□□□□□ -0.16
CLTCL1-205	ENST00000538828	IL23A	Q9NPF7	189 aa		14.06	□□□□□ -0.16
CLTCL1-205	ENST00000538828	RTEL1	Q9NZ71	1219 aa		14.06	□□□□□ -0.16
CLTCL1-205	ENST00000538828	TMEM265	A0A087WTH1	108 aa		14.05	□□□□□ -0.16
CLTCL1-205	ENST00000538828		H3BRB1	525 aa		14.05	□□□□□ -0.16
CLTCL1-205	ENST00000538828	PFKFB2	O60825	505 aa		14.05	□□□□□ -0.16
CLTCL1-205	ENST00000538828	LGALS2	P05162	132 aa		14.05	□□□□□ -0.16
CLTCL1-205	ENST00000538828	CIITA	P33076	1130 aa		14.05	□□□□□ -0.16
CLTCL1-205	ENST00000538828	CCT2	P78371	535 aa	Known RBP	14.05	□□□□□ -0.16
CLTCL1-205	ENST00000538828	ARHGAP4	P98171	946 aa		14.05	□□□□□ -0.16
CLTCL1-205	ENST00000538828	KIAA0753	Q2KHM9	967 aa		14.05	□□□□□ -0.16
CLTCL1-205	ENST00000538828	FAM47C	Q5HY64	1035 aa		14.05	□□□□□ -0.16
CLTCL1-205	ENST00000538828	CYFIP1	Q7L576	1253 aa		14.05	□□□□□ -0.16
CLTCL1-205	ENST00000538828	C7orf31	Q8N865	590 aa		14.05	□□□□□ -0.16
CLTCL1-205	ENST00000538828	AFAP1L1	Q8TED9	768 aa		14.05	□□□□□ -0.16
CLTCL1-205	ENST00000538828	SEPT1	Q8WYJ6	367 aa		14.05	□□□□□ -0.16
CLTCL1-205	ENST00000538828	PHKB	Q93100	1093 aa		14.05	□□□□□ -0.16
CLTCL1-205	ENST00000538828	SLC26A6	Q9BXS9	759 aa		14.05	□□□□□ -0.16
CLTCL1-205	ENST00000538828	SLK	Q9H2G2	1235 aa	Predicted RBP	14.05	□□□□□ -0.16
CLTCL1-205	ENST00000538828	MTIF3	Q9H2K0	278 aa	Known RBP	14.05	□□□□□ -0.16
CLTCL1-205	ENST00000538828	TUT1	Q9H6E5	874 aa	Known RBP	14.05	□□□□□ -0.16
CLTCL1-205	ENST00000538828	KCNH7	Q9NS40	1196 aa		14.05	□□□□□ -0.16
CLTCL1-205	ENST00000538828	TRMT13	Q9NUP7	481 aa	Known RBP	14.05	□□□□□ -0.16
CLTCL1-205	ENST00000538828	PCDH10	Q9P2E7	1040 aa		14.05	□□□□□ -0.16
CLTCL1-205	ENST00000538828	ZNF215	Q9UL58	517 aa	Predicted RBP	14.05	□□□□□ -0.16
CLTCL1-205	ENST00000538828	STK36	Q9NRP7	1315 aa		14.05	□□□□□ -0.16
CLTCL1-205	ENST00000538828	LAMA2	P24043	3122 aa	Known RBP	14.04	□□□□□ -0.16
CLTCL1-205	ENST00000538828	KAT6A	Q92794	2004 aa		14.04	□□□□□ -0.16
CLTCL1-205	ENST00000538828	CAND2	O75155	1236 aa		14.04	□□□□□ -0.16
CLTCL1-205	ENST00000538828	GNAT1	P11488	350 aa		14.04	□□□□□ -0.16
CLTCL1-205	ENST00000538828	CSF2RA	P15509	400 aa		14.04	□□□□□ -0.16
CLTCL1-205	ENST00000538828	CYP2C18	P33260	490 aa		14.04	□□□□□ -0.16
CLTCL1-205	ENST00000538828	USP11	P51784	963 aa		14.04	□□□□□ -0.16
CLTCL1-205	ENST00000538828	SET	Q01105	290 aa	Predicted RBP	14.04	□□□□□ -0.16
CLTCL1-205	ENST00000538828	PTK7	Q13308	1070 aa		14.04	□□□□□ -0.16
CLTCL1-205	ENST00000538828	PTGIS	Q16647	500 aa		14.04	□□□□□ -0.16
CLTCL1-205	ENST00000538828	TMEM240	Q5SV17	173 aa		14.04	□□□□□ -0.16
CLTCL1-205	ENST00000538828	C9orf50	Q5SZB4	431 aa		14.04	□□□□□ -0.16
CLTCL1-205	ENST00000538828	RETREG2	Q8NC44	543 aa		14.04	□□□□□ -0.16
CLTCL1-205	ENST00000538828	DAGLB	Q8NCG7	672 aa		14.04	□□□□□ -0.16
CLTCL1-205	ENST00000538828	HERVK_113	Q902F9	699 aa		14.04	□□□□□ -0.16
CLTCL1-205	ENST00000538828	TNPO1	Q92973	898 aa	Known RBP	14.04	□□□□□ -0.16
CLTCL1-205	ENST00000538828	PPP1R12C	Q9BZL4	782 aa		14.04	□□□□□ -0.16
CLTCL1-205	ENST00000538828	WNT8A	Q9H1J5	351 aa		14.04	□□□□□ -0.16
CLTCL1-205	ENST00000538828	NCOA5	Q9HCD5	579 aa	Known RBP	14.04	□□□□□ -0.16
CLTCL1-205	ENST00000538828	HDAC6	Q9UBN7	1215 aa		14.04	□□□□□ -0.16
CLTCL1-205	ENST00000538828	NOD1	Q9Y239	953 aa		14.04	□□□□□ -0.16
CLTCL1-205	ENST00000538828	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	14.03	□□□□□ -0.16
CLTCL1-205	ENST00000538828	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	14.03	□□□□□ -0.16
CLTCL1-205	ENST00000538828	SOX1	O00570	391 aa	Predicted RBP	14.03	□□□□□ -0.16
CLTCL1-205	ENST00000538828	ATP9A	O75110	1047 aa		14.03	□□□□□ -0.16
CLTCL1-205	ENST00000538828	RPLP2	P05387	115 aa	Known RBP	14.03	□□□□□ -0.16
CLTCL1-205	ENST00000538828	EPHB4	P54760	987 aa		14.03	□□□□□ -0.16
CLTCL1-205	ENST00000538828	GDF6	Q6KF10	455 aa	Predicted RBP	14.03	□□□□□ -0.16
CLTCL1-205	ENST00000538828	C16orf59	Q7L2K0	433 aa		14.03	□□□□□ -0.16
CLTCL1-205	ENST00000538828	RNPC3	Q96LT9	517 aa	Known RBP	14.03	□□□□□ -0.16
CLTCL1-205	ENST00000538828	CTAGE1	Q96RT6	745 aa		14.03	□□□□□ -0.16
CLTCL1-205	ENST00000538828	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	14.03	□□□□□ -0.16
CLTCL1-205	ENST00000538828	EMSY	Q7Z589	1322 aa		14.03	□□□□□ -0.16
CLTCL1-205	ENST00000538828	TRIP12	Q14669	1992 aa	Predicted RBP	14.03	□□□□□ -0.16
CLTCL1-205	ENST00000538828	SZT2	Q5T011	3432 aa		14.02	□□□□□ -0.16
CLTCL1-205	ENST00000538828	NRCAM	Q92823	1304 aa		14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	LGR5	O75473	907 aa		14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	ATG7	O95352	703 aa		14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	FGB	P02675	491 aa		14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	IQCF3	P0C7M6	154 aa		14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	ZNF286B	P0CG31	522 aa		14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	CYP2C9	P11712	490 aa		14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	XBP1	P17861	261 aa		14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	SLC26A2	P50443	739 aa		14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	AK2	P54819	239 aa		14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	ADAM17	P78536	824 aa		14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	SCRN1	Q12765	414 aa		14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	C8orf34	Q49A92	452 aa		14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	MOXD1	Q6UVY6	613 aa		14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	FAM43B	Q6ZT52	329 aa	Predicted RBP	14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	RPAIN	Q86UA6	219 aa		14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	SERINC5	Q86VE9	423 aa		14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	WASF1	Q92558	559 aa		14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	ZFP91	Q96JP5	570 aa	Predicted RBP	14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	SDF4	Q9BRK5	362 aa		14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	SMARCAD1	Q9H4L7	1026 aa		14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	JPH1	Q9HDC5	661 aa	Predicted RBP	14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	ERAP1	Q9NZ08	941 aa		14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	SLC9A2	Q9UBY0	812 aa		14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	TPCN1	Q9ULQ1	816 aa		14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	PCDHA4	Q9UN74	947 aa		14.02	□□□□□ -0.17
CLTCL1-205	ENST00000538828	TANC1	Q9C0D5	1861 aa		14.01	□□□□□ -0.17
CLTCL1-205	ENST00000538828	DOCK5	Q9H7D0	1870 aa		14.01	□□□□□ -0.17
CLTCL1-205	ENST00000538828	IGLV3-22	A0A075B6J6	115 aa		14.01	□□□□□ -0.17
CLTCL1-205	ENST00000538828	GSTTP1	A0A1W2PQM5	241 aa		14.01	□□□□□ -0.17
CLTCL1-205	ENST00000538828	C17orf102	A2RUQ5	167 aa		14.01	□□□□□ -0.17
CLTCL1-205	ENST00000538828		M0R2N6	131 aa		14.01	□□□□□ -0.17
CLTCL1-205	ENST00000538828	SELP	P16109	830 aa		14.01	□□□□□ -0.17
CLTCL1-205	ENST00000538828	TCF7	P36402	384 aa	Predicted RBP	14.01	□□□□□ -0.17
CLTCL1-205	ENST00000538828	ZNF76	P36508	570 aa		14.01	□□□□□ -0.17
CLTCL1-205	ENST00000538828	NLRP5	P59047	1200 aa		14.01	□□□□□ -0.17

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