RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 AP3B2Q13367 1082 aa27.58■■■□□ 2.01
RAB40C-204ENST00000538492 SLFN12Q8IYM2 578 aa27.58■■■□□ 2.01
RAB40C-204ENST00000538492 RAB21Q9UL25 225 aa27.58■■■□□ 2.01
RAB40C-204ENST00000538492 RRP1BQ14684 758 aaKnown RBP27.58■■■□□ 2.01
RAB40C-204ENST00000538492 PRMT6Q96LA8 375 aaPredicted RBP27.58■■■□□ 2.01
RAB40C-204ENST00000538492 DEF6Q9H4E7 631 aa27.58■■■□□ 2.01
RAB40C-204ENST00000538492 PCDHA2Q9Y5H9 948 aa27.58■■■□□ 2.01
RAB40C-204ENST00000538492 MEIS1O00470 390 aa27.57■■■□□ 2
RAB40C-204ENST00000538492 HOXA13P31271 388 aaPredicted RBP27.57■■■□□ 2
RAB40C-204ENST00000538492 EIF4A3P38919 411 aaKnown RBP27.57■■■□□ 2
RAB40C-204ENST00000538492 SYDE2Q5VT97 1194 aa27.57■■■□□ 2
RAB40C-204ENST00000538492 ETNPPLQ8TBG4 499 aa27.57■■■□□ 2
RAB40C-204ENST00000538492 CRYGNQ8WXF5 182 aa27.57■■■□□ 2
RAB40C-204ENST00000538492 MBOAT7Q96N66 472 aa27.57■■■□□ 2
RAB40C-204ENST00000538492 KIF11P52732 1056 aa27.57■■■□□ 2
RAB40C-204ENST00000538492 VSNL1P62760 191 aa27.57■■■□□ 2
RAB40C-204ENST00000538492 CATSPER3Q86XQ3 398 aa27.57■■■□□ 2
RAB40C-204ENST00000538492 GMCL1P1Q8NEA9 526 aa27.57■■■□□ 2
RAB40C-204ENST00000538492 ZBTB9Q96C00 473 aa27.57■■■□□ 2
RAB40C-204ENST00000538492 MMS19Q96T76 1030 aa27.57■■■□□ 2
RAB40C-204ENST00000538492 IFIH1Q9BYX4 1025 aaKnown RBP27.57■■■□□ 2
RAB40C-204ENST00000538492 RNF216Q9NWF9 866 aaPredicted RBP27.57■■■□□ 2
RAB40C-204ENST00000538492 ZNF646O15015 1829 aaPredicted RBP27.57■■■□□ 2
RAB40C-204ENST00000538492 SPDYE3A6NKU9 549 aa27.56■■■□□ 2
RAB40C-204ENST00000538492 FAM86B1E9PN63 330 aa27.56■■■□□ 2
RAB40C-204ENST00000538492 FAM86B2P0C5J1 330 aa27.56■■■□□ 2
RAB40C-204ENST00000538492 PSMC6P62333 389 aa27.56■■■□□ 2
RAB40C-204ENST00000538492 TUBB4BP68371 445 aa27.56■■■□□ 2
RAB40C-204ENST00000538492 SPIRE1Q08AE8 756 aa27.56■■■□□ 2
RAB40C-204ENST00000538492 ARSHQ5FYA8 562 aa27.56■■■□□ 2
RAB40C-204ENST00000538492 PAPD7Q5XG87 772 aaKnown RBP27.56■■■□□ 2
RAB40C-204ENST00000538492 STYK1Q6J9G0 422 aa27.56■■■□□ 2
RAB40C-204ENST00000538492 NEK11Q8NG66 645 aa27.56■■■□□ 2
RAB40C-204ENST00000538492 CSRNP1Q96S65 589 aa27.56■■■□□ 2
RAB40C-204ENST00000538492 KCNMA1Q12791 1236 aa27.56■■■□□ 2
RAB40C-204ENST00000538492 SMC1AQ14683 1233 aaKnown RBP27.56■■■□□ 2
RAB40C-204ENST00000538492 RBM26Q5T8P6 1007 aaKnown RBP27.56■■■□□ 2
RAB40C-204ENST00000538492 CACNA2D4Q7Z3S7 1137 aa27.56■■■□□ 2
RAB40C-204ENST00000538492 SCFD1Q8WVM8 642 aa27.56■■■□□ 2
RAB40C-204ENST00000538492 BAP1Q92560 729 aa27.56■■■□□ 2
RAB40C-204ENST00000538492 GMCL1Q96IK5 515 aa27.56■■■□□ 2
RAB40C-204ENST00000538492 SMCHD1A6NHR9 2005 aa27.56■■■□□ 2
RAB40C-204ENST00000538492 A0A1W2PRG0 241 aa27.55■■■□□ 2
RAB40C-204ENST00000538492 BMP3P12645 472 aa27.55■■■□□ 2
RAB40C-204ENST00000538492 BEND6Q5SZJ8 279 aaPredicted RBP27.55■■■□□ 2
RAB40C-204ENST00000538492 SECISBP2LQ93073 1101 aaKnown RBP27.55■■■□□ 2
RAB40C-204ENST00000538492 SUGCTQ9HAC7 445 aa27.55■■■□□ 2
RAB40C-204ENST00000538492 ABCB6Q9NP58 842 aa27.55■■■□□ 2
RAB40C-204ENST00000538492 ZCCHC17Q9NP64 241 aaKnown RBP27.55■■■□□ 2
RAB40C-204ENST00000538492 PCDHA13Q9Y5I0 950 aa27.55■■■□□ 2
RAB40C-204ENST00000538492 AKR1B10O60218 316 aa27.55■■■□□ 2
RAB40C-204ENST00000538492 HOXA7P31268 230 aaPredicted RBP27.55■■■□□ 2
RAB40C-204ENST00000538492 SLC12A3P55017 1021 aa27.55■■■□□ 2
RAB40C-204ENST00000538492 LENG9Q96B70 501 aa27.55■■■□□ 2
RAB40C-204ENST00000538492 NLRC4Q9NPP4 1024 aa27.55■■■□□ 2
RAB40C-204ENST00000538492 EMILIN3Q9NT22 766 aa27.55■■■□□ 2
RAB40C-204ENST00000538492 NPM3O75607 178 aaKnown RBP27.55■■■□□ 2
RAB40C-204ENST00000538492 PABPC4Q13310 644 aaKnown RBP eCLIP27.55■■■□□ 2
RAB40C-204ENST00000538492 HAUS3Q68CZ6 603 aa27.55■■■□□ 2
RAB40C-204ENST00000538492 HNRNPLLQ8WVV9 542 aaKnown RBP27.55■■■□□ 2
RAB40C-204ENST00000538492 PURBQ96QR8 312 aaKnown RBP27.55■■■□□ 2
RAB40C-204ENST00000538492 UBXN6Q9BZV1 441 aa27.55■■■□□ 2
RAB40C-204ENST00000538492 ZNF185O15231 689 aa27.54■■■□□ 2
RAB40C-204ENST00000538492 OAS2P29728 719 aaKnown RBP27.54■■■□□ 2
RAB40C-204ENST00000538492 MOXD1Q6UVY6 613 aa27.54■■■□□ 2
RAB40C-204ENST00000538492 CYP2W1Q8TAV3 490 aa27.54■■■□□ 2
RAB40C-204ENST00000538492 JADE2Q9NQC1 790 aa27.54■■■□□ 2
RAB40C-204ENST00000538492 FOXR2Q6PJQ5 311 aa27.54■■■□□ 2
RAB40C-204ENST00000538492 CRACR2AQ9BSW2 395 aa27.54■■■□□ 2
RAB40C-204ENST00000538492 OPLAHO14841 1288 aa27.53■■■□□ 2
RAB40C-204ENST00000538492 TSGA10Q9BZW7 698 aa27.53■■■□□ 2
RAB40C-204ENST00000538492 KCTD10Q9H3F6 313 aa27.53■■■□□ 2
RAB40C-204ENST00000538492 MLXIPQ9HAP2 919 aa27.53■■■□□ 2
RAB40C-204ENST00000538492 ERLIN1O75477 346 aa27.53■■■□□ 2
RAB40C-204ENST00000538492 CASP5P51878 434 aa27.53■■■□□ 2
RAB40C-204ENST00000538492 APBA1Q02410 837 aa27.53■■■□□ 2
RAB40C-204ENST00000538492 CAPN6Q9Y6Q1 641 aa27.53■■■□□ 2
RAB40C-204ENST00000538492 USO1O60763 962 aaKnown RBP27.52■■■□□ 2
RAB40C-204ENST00000538492 SPATA31C1P0DKV0 1188 aa27.52■■■□□ 2
RAB40C-204ENST00000538492 SREBF1P36956 1147 aa27.52■■■□□ 2
RAB40C-204ENST00000538492 ECE1P42892 770 aa27.52■■■□□ 2
RAB40C-204ENST00000538492 CYP4A11Q02928 519 aa27.52■■■□□ 2
RAB40C-204ENST00000538492 Q4G0T1 1027 aa27.52■■■□□ 2
RAB40C-204ENST00000538492 PDXDC1Q6P996 788 aa27.52■■■□□ 2
RAB40C-204ENST00000538492 DRC1Q96MC2 740 aa27.52■■■□□ 2
RAB40C-204ENST00000538492 YDJCA8MPS7 323 aa27.52■■■□□ 2
RAB40C-204ENST00000538492 TCP10L2B9ZVM9 353 aa27.52■■■□□ 2
RAB40C-204ENST00000538492 MYH10P35580 1976 aa27.51■■□□□ 1.99
RAB40C-204ENST00000538492 ATRNL1Q5VV63 1379 aa27.51■■□□□ 1.99
RAB40C-204ENST00000538492 MAP2K7O14733 419 aa27.51■■□□□ 1.99
RAB40C-204ENST00000538492 ENTPD3O75355 529 aa27.51■■□□□ 1.99
RAB40C-204ENST00000538492 ERMNQ8TAM6 284 aa27.51■■□□□ 1.99
RAB40C-204ENST00000538492 CEP63Q96MT8 703 aa27.51■■□□□ 1.99
RAB40C-204ENST00000538492 DNM3Q9UQ16 869 aa27.51■■□□□ 1.99
RAB40C-204ENST00000538492 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.51■■□□□ 1.99
RAB40C-204ENST00000538492 MSH4O15457 936 aa27.51■■□□□ 1.99
RAB40C-204ENST00000538492 MOCS3O95396 460 aa27.51■■□□□ 1.99
RAB40C-204ENST00000538492 GFPT1Q06210 699 aaPredicted RBP27.51■■□□□ 1.99
RAB40C-204ENST00000538492 ADAM9Q13443 819 aa27.51■■□□□ 1.99
RAB40C-204ENST00000538492 CC2D2BQ6DHV5 1058 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms