RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 KCNG1Q9UIX4 513 aa7.43□□□□□ -1.22
USP28-207ENST00000538475 TAF6LQ9Y6J9 622 aa7.43□□□□□ -1.22
USP28-207ENST00000538475 SYNRGQ9UMZ2 1314 aa7.43□□□□□ -1.22
USP28-207ENST00000538475 SCN11AQ9UI33 1791 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 ARFGEF2Q9Y6D5 1785 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 ERICH2A1L162 156 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 H7C1D1 291 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 USO1O60763 962 aaKnown RBP7.42□□□□□ -1.22
USP28-207ENST00000538475 GYPCP04921 128 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 POLR3DP05423 398 aaPredicted RBP7.42□□□□□ -1.22
USP28-207ENST00000538475 BMP6P22004 513 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 CASP14P31944 242 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 PPP1R2P41236 205 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 CCT2P78371 535 aaKnown RBP7.42□□□□□ -1.22
USP28-207ENST00000538475 PDE4BQ07343 736 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 PAK2Q13177 524 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 MTF1Q14872 753 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 SUZ12Q15022 739 aaKnown RBP7.42□□□□□ -1.22
USP28-207ENST00000538475 SAFBQ15424 915 aaKnown RBP eCLIP7.42□□□□□ -1.22
USP28-207ENST00000538475 MEA1Q16626 185 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 SWI5Q1ZZU3 235 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 TNNI3KQ59H18 835 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 FIGNQ5HY92 759 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 CFAP58Q5T655 872 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 WWC2Q6AWC2 1192 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 CYB5D1Q6P9G0 228 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 TMED8Q6PL24 325 aaPredicted RBP7.42□□□□□ -1.22
USP28-207ENST00000538475 RUFY4Q6ZNE9 571 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 CACNA2D4Q7Z3S7 1137 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 BTLAQ7Z6A9 289 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 CROCCP2Q86T23 111 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 VPS37DQ86XT2 251 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 NCOA7Q8NI08 942 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 MYCBPAPQ8TBZ2 947 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 JAKMIP2Q96AA8 810 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 CENPTQ96BT3 561 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 TMEM87BQ96K49 555 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 CCT8L2Q96SF2 557 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 MMS19Q96T76 1030 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 CDC5LQ99459 802 aaKnown RBP7.42□□□□□ -1.22
USP28-207ENST00000538475 CCDC8Q9H0W5 538 aaPredicted RBP7.42□□□□□ -1.22
USP28-207ENST00000538475 FOXP1Q9H334 677 aaPredicted RBP7.42□□□□□ -1.22
USP28-207ENST00000538475 EBF2Q9HAK2 575 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 RMND1Q9NWS8 449 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 AATFQ9NY61 560 aaKnown RBP eCLIP7.42□□□□□ -1.22
USP28-207ENST00000538475 ETAA1Q9NY74 926 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 STIM2Q9P246 746 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 RWDD2AQ9UIY3 292 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 CORO1CQ9ULV4 474 aaPredicted RBP7.42□□□□□ -1.22
USP28-207ENST00000538475 KCNH4Q9UQ05 1017 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 SRPRBQ9Y5M8 271 aaKnown RBP7.42□□□□□ -1.22
USP28-207ENST00000538475 FPGT-TNNI3KV9GXZ4 949 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 KIF13BQ9NQT8 1826 aa7.42□□□□□ -1.22
USP28-207ENST00000538475 TJP1Q07157 1748 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 RGPD8O14715 1765 aaPredicted RBP7.41□□□□□ -1.22
USP28-207ENST00000538475 GRID2IPA4D2P6 1211 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 GOLGA6L10A6NI86 522 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 TTC36A6NLP5 189 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 ANKRD65E5RJM6 399 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 MYO1FO00160 1098 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 CES2O00748 559 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 RNF113AO15541 343 aaKnown RBP7.41□□□□□ -1.22
USP28-207ENST00000538475 AHCYL1O43865 530 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 PRMT3O60678 531 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 TACC1O75410 805 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 ATG7O95352 703 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 HSPD1P10809 573 aaKnown RBP7.41□□□□□ -1.22
USP28-207ENST00000538475 NR1D1P20393 614 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 SCP2P22307 547 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 EEF1GP26641 437 aaKnown RBP7.41□□□□□ -1.22
USP28-207ENST00000538475 GBP2P32456 591 aaPredicted RBP7.41□□□□□ -1.22
USP28-207ENST00000538475 KRT9P35527 623 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 PAFAH1B1P43034 410 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 FMR1Q06787 632 aaKnown RBP eCLIP7.41□□□□□ -1.22
USP28-207ENST00000538475 GOLGA8FQ08AF8 430 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 GOLGA8DPQ0D2H9 430 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 SPEM2Q0P670 501 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 NEXNQ0ZGT2 675 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 SEPT2Q15019 361 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 PPP2R5BQ15173 497 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 RABL6Q3YEC7 729 aaPredicted RBP7.41□□□□□ -1.22
USP28-207ENST00000538475 CMPK2Q5EBM0 449 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 SPECC1Q5M775 1068 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 CCDC122Q5T0U0 273 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 SLC9C2Q5TAH2 1124 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 AGBL2Q5U5Z8 902 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 CDCA2Q69YH5 1023 aaPredicted RBP7.41□□□□□ -1.22
USP28-207ENST00000538475 KRT40Q6A162 431 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 NCAPH2Q6IBW4 605 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 TTLL7Q6ZT98 887 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 SND1Q7KZF4 910 aaKnown RBP eCLIP7.41□□□□□ -1.22
USP28-207ENST00000538475 SYT9Q86SS6 491 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 MB21D2Q8IYB1 491 aaPredicted RBP7.41□□□□□ -1.22
USP28-207ENST00000538475 TEX9Q8N6V9 391 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 CCDC26Q8TAB7 109 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 CAGE1Q8TC20 777 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 ZNF483Q8TF39 744 aaPredicted RBP7.41□□□□□ -1.22
USP28-207ENST00000538475 STK32AQ8WU08 396 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 FERMT2Q96AC1 680 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 BTBD6Q96KE9 485 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms