RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 PPP6R2O75170 966 aa27.39■■□□□ 1.98
HMGA2-208ENST00000537429 INHAP05111 366 aa27.39■■□□□ 1.98
HMGA2-208ENST00000537429 MARCKSP29966 332 aaPredicted RBP27.39■■□□□ 1.98
HMGA2-208ENST00000537429 LRCH2Q5VUJ6 765 aa27.39■■□□□ 1.98
HMGA2-208ENST00000537429 FBXO46Q6PJ61 603 aaPredicted RBP27.39■■□□□ 1.98
HMGA2-208ENST00000537429 KCNG4Q8TDN1 519 aa27.39■■□□□ 1.98
HMGA2-208ENST00000537429 BCAS3Q9H6U6 928 aa27.39■■□□□ 1.98
HMGA2-208ENST00000537429 TTC12Q9H892 705 aaPredicted RBP27.39■■□□□ 1.98
HMGA2-208ENST00000537429 PCDHA12Q9UN75 941 aa27.39■■□□□ 1.98
HMGA2-208ENST00000537429 CNGA1P29973 690 aa27.38■■□□□ 1.97
HMGA2-208ENST00000537429 NEDD9Q14511 834 aa27.38■■□□□ 1.97
HMGA2-208ENST00000537429 IL17AQ16552 155 aa27.38■■□□□ 1.97
HMGA2-208ENST00000537429 DUSP28Q4G0W2 176 aa27.38■■□□□ 1.97
HMGA2-208ENST00000537429 GIMAP8Q8ND71 665 aaPredicted RBP27.38■■□□□ 1.97
HMGA2-208ENST00000537429 GDPD2Q9HCC8 539 aa27.38■■□□□ 1.97
HMGA2-208ENST00000537429 FAM184BQ9ULE4 1060 aa27.38■■□□□ 1.97
HMGA2-208ENST00000537429 ADCY6O43306 1168 aa27.37■■□□□ 1.97
HMGA2-208ENST00000537429 GAS7O60861 476 aa27.37■■□□□ 1.97
HMGA2-208ENST00000537429 AKR1A1P14550 325 aa27.37■■□□□ 1.97
HMGA2-208ENST00000537429 SMPD1P17405 629 aa27.37■■□□□ 1.97
HMGA2-208ENST00000537429 TNFAIP2Q03169 654 aa27.37■■□□□ 1.97
HMGA2-208ENST00000537429 DTHD1Q6ZMT9 781 aa27.37■■□□□ 1.97
HMGA2-208ENST00000537429 SDF4Q9BRK5 362 aa27.37■■□□□ 1.97
HMGA2-208ENST00000537429 FBXO2Q9UK22 296 aaPredicted RBP27.37■■□□□ 1.97
HMGA2-208ENST00000537429 SRPRBQ9Y5M8 271 aaKnown RBP27.37■■□□□ 1.97
HMGA2-208ENST00000537429 SEPT4O43236 478 aa27.36■■□□□ 1.97
HMGA2-208ENST00000537429 CCND3P30281 292 aaPredicted RBP27.36■■□□□ 1.97
HMGA2-208ENST00000537429 B3GNT9Q6UX72 402 aa27.36■■□□□ 1.97
HMGA2-208ENST00000537429 COPS5Q92905 334 aa27.36■■□□□ 1.97
HMGA2-208ENST00000537429 FERMT2Q96AC1 680 aa27.36■■□□□ 1.97
HMGA2-208ENST00000537429 TEKT3Q9BXF9 490 aa27.36■■□□□ 1.97
HMGA2-208ENST00000537429 VAV3Q9UKW4 847 aa27.36■■□□□ 1.97
HMGA2-208ENST00000537429 GNEQ9Y223 722 aaKnown RBP27.36■■□□□ 1.97
HMGA2-208ENST00000537429 DOCK5Q9H7D0 1870 aa27.36■■□□□ 1.97
HMGA2-208ENST00000537429 NKRFO15226 690 aaKnown RBP eCLIP27.36■■□□□ 1.974e-8■□□□□ 8.1
HMGA2-208ENST00000537429 GGPS1O95749 300 aa27.36■■□□□ 1.97
HMGA2-208ENST00000537429 FXR2P51116 673 aaKnown RBP eCLIP27.36■■□□□ 1.97
HMGA2-208ENST00000537429 SPIRE1Q08AE8 756 aa27.36■■□□□ 1.97
HMGA2-208ENST00000537429 CELF3Q5SZQ8 465 aaKnown RBP27.36■■□□□ 1.97
HMGA2-208ENST00000537429 GJC2Q5T442 439 aaPredicted RBP27.36■■□□□ 1.97
HMGA2-208ENST00000537429 CYFIP1Q7L576 1253 aa27.36■■□□□ 1.97
HMGA2-208ENST00000537429 FARP2O94887 1054 aaPredicted RBP27.35■■□□□ 1.97
HMGA2-208ENST00000537429 TECP42680 631 aa27.35■■□□□ 1.97
HMGA2-208ENST00000537429 PPP2R5CQ13362 524 aa27.35■■□□□ 1.97
HMGA2-208ENST00000537429 METTL7BQ6UX53 244 aa27.35■■□□□ 1.97
HMGA2-208ENST00000537429 KRI1Q8N9T8 703 aaKnown RBP27.35■■□□□ 1.97
HMGA2-208ENST00000537429 VWA3AA6NCI4 1184 aa27.34■■□□□ 1.97
HMGA2-208ENST00000537429 DDX39AO00148 427 aaKnown RBP27.34■■□□□ 1.97
HMGA2-208ENST00000537429 PTGS1P23219 599 aa27.34■■□□□ 1.97
HMGA2-208ENST00000537429 GRIN1Q05586 938 aa27.34■■□□□ 1.97
HMGA2-208ENST00000537429 TMEM266Q2M3C6 531 aa27.34■■□□□ 1.97
HMGA2-208ENST00000537429 DHX37Q8IY37 1157 aaKnown RBP27.34■■□□□ 1.97
HMGA2-208ENST00000537429 MLXIPQ9HAP2 919 aa27.34■■□□□ 1.97
HMGA2-208ENST00000537429 JPH1Q9HDC5 661 aaPredicted RBP27.34■■□□□ 1.97
HMGA2-208ENST00000537429 SLC9A2Q9UBY0 812 aa27.34■■□□□ 1.97
HMGA2-208ENST00000537429 MYCP01106 439 aaPredicted RBP27.33■■□□□ 1.97
HMGA2-208ENST00000537429 GH1P01241 217 aa27.33■■□□□ 1.97
HMGA2-208ENST00000537429 ARHGAP1Q07960 439 aa27.33■■□□□ 1.97
HMGA2-208ENST00000537429 PDIA5Q14554 519 aa27.33■■□□□ 1.97
HMGA2-208ENST00000537429 IGSF22Q8N9C0 903 aa27.33■■□□□ 1.97
HMGA2-208ENST00000537429 EMID1Q96A84 441 aaPredicted RBP27.33■■□□□ 1.97
HMGA2-208ENST00000537429 GBP4Q96PP9 640 aa27.33■■□□□ 1.97
HMGA2-208ENST00000537429 UNC45AQ9H3U1 944 aa27.33■■□□□ 1.97
HMGA2-208ENST00000537429 HMX1Q9NP08 348 aaPredicted RBP27.33■■□□□ 1.97
HMGA2-208ENST00000537429 PCDHA7Q9UN72 937 aa27.33■■□□□ 1.97
HMGA2-208ENST00000537429 ELP1O95163 1332 aa27.33■■□□□ 1.97
HMGA2-208ENST00000537429 SORBS3O60504 671 aa27.32■■□□□ 1.96
HMGA2-208ENST00000537429 ME1P48163 572 aa27.32■■□□□ 1.96
HMGA2-208ENST00000537429 KRT76Q01546 638 aa27.32■■□□□ 1.96
HMGA2-208ENST00000537429 LAMC2Q13753 1193 aa27.32■■□□□ 1.96
HMGA2-208ENST00000537429 CLIC6Q96NY7 704 aa27.32■■□□□ 1.96
HMGA2-208ENST00000537429 Q9Y3F1 56 aa27.32■■□□□ 1.96
HMGA2-208ENST00000537429 POTEFA5A3E0 1075 aa27.31■■□□□ 1.96
HMGA2-208ENST00000537429 DUSP11O75319 330 aaKnown RBP27.31■■□□□ 1.96
HMGA2-208ENST00000537429 CCNE2O96020 404 aa27.31■■□□□ 1.96
HMGA2-208ENST00000537429 AXDND1Q5T1B0 1012 aaPredicted RBP27.31■■□□□ 1.96
HMGA2-208ENST00000537429 ZNF746Q6NUN9 644 aaPredicted RBP27.31■■□□□ 1.96
HMGA2-208ENST00000537429 LENG1Q96BZ8 264 aaPredicted RBP27.31■■□□□ 1.96
HMGA2-208ENST00000537429 RAB34Q9BZG1 259 aa27.31■■□□□ 1.96
HMGA2-208ENST00000537429 POTEMA6NI47 508 aa27.31■■□□□ 1.96
HMGA2-208ENST00000537429 CUTAO60888 179 aa27.31■■□□□ 1.96
HMGA2-208ENST00000537429 LONP1P36776 959 aaKnown RBP27.31■■□□□ 1.96
HMGA2-208ENST00000537429 CSPP1Q1MSJ5 1256 aa27.31■■□□□ 1.96
HMGA2-208ENST00000537429 HSDL1Q3SXM5 330 aa27.31■■□□□ 1.96
HMGA2-208ENST00000537429 TMEM87AQ8NBN3 555 aa27.31■■□□□ 1.96
HMGA2-208ENST00000537429 CSRNP2Q9H175 543 aa27.31■■□□□ 1.96
HMGA2-208ENST00000537429 TCEAL9Q9UHQ7 104 aa27.31■■□□□ 1.96
HMGA2-208ENST00000537429 TELO2Q9Y4R8 837 aa27.31■■□□□ 1.96
HMGA2-208ENST00000537429 EML1O00423 815 aa27.3■■□□□ 1.96
HMGA2-208ENST00000537429 TLK2Q86UE8 772 aa27.3■■□□□ 1.96
HMGA2-208ENST00000537429 ZNF579Q8NAF0 562 aaKnown RBP27.3■■□□□ 1.96
HMGA2-208ENST00000537429 OR6J1Q8NGC5 347 aa27.3■■□□□ 1.96
HMGA2-208ENST00000537429 AK8Q96MA6 479 aa27.3■■□□□ 1.96
HMGA2-208ENST00000537429 SPATA33Q96N06 139 aa27.3■■□□□ 1.96
HMGA2-208ENST00000537429 DDX20Q9UHI6 824 aaKnown RBP27.3■■□□□ 1.96
HMGA2-208ENST00000537429 DYNC1LI2O43237 492 aaPredicted RBP27.29■■□□□ 1.96
HMGA2-208ENST00000537429 CHMP2AO43633 222 aa27.29■■□□□ 1.96
HMGA2-208ENST00000537429 ACTR2P61160 394 aa27.29■■□□□ 1.96
HMGA2-208ENST00000537429 SP4Q02446 784 aa27.29■■□□□ 1.96
HMGA2-208ENST00000537429 ADALQ6DHV7 355 aa27.29■■□□□ 1.96
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