RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 TMOD1P28289 359 aa17.15■□□□□ 0.34
CHFR-213ENST00000536843 HSD17B3P37058 310 aa17.15■□□□□ 0.34
CHFR-213ENST00000536843 ZNF844Q08AG5 666 aa17.15■□□□□ 0.34
CHFR-213ENST00000536843 RBBP5Q15291 538 aaKnown RBP17.15■□□□□ 0.34
CHFR-213ENST00000536843 TTI2Q6NXR4 508 aa17.15■□□□□ 0.34
CHFR-213ENST00000536843 RNF10Q8N5U6 811 aaKnown RBP17.15■□□□□ 0.34
CHFR-213ENST00000536843 TCP11Q8WWU5 503 aa17.15■□□□□ 0.34
CHFR-213ENST00000536843 L3MBTL3Q96JM7 780 aaPredicted RBP17.15■□□□□ 0.34
CHFR-213ENST00000536843 PHF20Q9BVI0 1012 aa17.15■□□□□ 0.34
CHFR-213ENST00000536843 hCG_1642624A0A1W2PR95 340 aa17.14■□□□□ 0.33
CHFR-213ENST00000536843 USP17L12C9JPN9 530 aa17.14■□□□□ 0.33
CHFR-213ENST00000536843 USP17L21D6R901 530 aa17.14■□□□□ 0.33
CHFR-213ENST00000536843 ATP2C2O75185 946 aa17.14■□□□□ 0.33
CHFR-213ENST00000536843 RPS6KA4O75676 772 aa17.14■□□□□ 0.33
CHFR-213ENST00000536843 SNUPNO95149 360 aaKnown RBP17.14■□□□□ 0.33
CHFR-213ENST00000536843 XBP1P17861 261 aa17.14■□□□□ 0.33
CHFR-213ENST00000536843 MECOMQ03112 1051 aa17.14■□□□□ 0.33
CHFR-213ENST00000536843 RNF26Q9BY78 433 aaPredicted RBP17.14■□□□□ 0.33
CHFR-213ENST00000536843 NYXQ9GZU5 481 aa17.14■□□□□ 0.33
CHFR-213ENST00000536843 NDST4Q9H3R1 872 aa17.14■□□□□ 0.33
CHFR-213ENST00000536843 SWAP70Q9UH65 585 aa17.14■□□□□ 0.33
CHFR-213ENST00000536843 CFAP73A6NFT4 308 aa17.13■□□□□ 0.33
CHFR-213ENST00000536843 HIBADHP31937 336 aaKnown RBP17.13■□□□□ 0.33
CHFR-213ENST00000536843 SEMA3FQ13275 785 aa17.13■□□□□ 0.33
CHFR-213ENST00000536843 IFIT1BQ5T764 474 aaKnown RBP17.13■□□□□ 0.33
CHFR-213ENST00000536843 TYW1BQ6NUM6 668 aa17.13■□□□□ 0.33
CHFR-213ENST00000536843 CPLX4Q7Z7G2 160 aa17.13■□□□□ 0.33
CHFR-213ENST00000536843 ZSCAN29Q8IWY8 852 aaPredicted RBP17.13■□□□□ 0.33
CHFR-213ENST00000536843 CCDC63Q8NA47 563 aa17.13■□□□□ 0.33
CHFR-213ENST00000536843 NOX5Q96PH1 765 aa17.13■□□□□ 0.33
CHFR-213ENST00000536843 ISCUQ9H1K1 167 aa17.13■□□□□ 0.33
CHFR-213ENST00000536843 CNOT8Q9UFF9 292 aaKnown RBP17.13■□□□□ 0.33
CHFR-213ENST00000536843 SALL4Q9UJQ4 1053 aa17.13■□□□□ 0.33
CHFR-213ENST00000536843 A0A1B0GUL6 1792 aa17.13■□□□□ 0.33
CHFR-213ENST00000536843 ZNF831Q5JPB2 1677 aa17.13■□□□□ 0.33
CHFR-213ENST00000536843 NHSQ6T4R5 1651 aa17.13■□□□□ 0.33
CHFR-213ENST00000536843 F8W031 263 aaPredicted RBP17.13■□□□□ 0.33
CHFR-213ENST00000536843 PSMA7O14818 248 aa17.13■□□□□ 0.33
CHFR-213ENST00000536843 GNPATO15228 680 aa17.13■□□□□ 0.33
CHFR-213ENST00000536843 PLEKHA8P1O95397 391 aa17.13■□□□□ 0.33
CHFR-213ENST00000536843 ALADP13716 330 aa17.13■□□□□ 0.33
CHFR-213ENST00000536843 PTGDRQ13258 359 aa17.13■□□□□ 0.33
CHFR-213ENST00000536843 ZNF174Q15697 407 aa17.13■□□□□ 0.33
CHFR-213ENST00000536843 UAP1Q16222 522 aaPredicted RBP17.13■□□□□ 0.33
CHFR-213ENST00000536843 PKN1Q16512 942 aa17.13■□□□□ 0.33
CHFR-213ENST00000536843 TTC38Q5R3I4 469 aa17.13■□□□□ 0.33
CHFR-213ENST00000536843 RC3H1Q5TC82 1133 aaKnown RBP17.13■□□□□ 0.33
CHFR-213ENST00000536843 CATIPQ7Z7H3 387 aa17.13■□□□□ 0.33
CHFR-213ENST00000536843 LRRC45Q96CN5 670 aa17.13■□□□□ 0.33
CHFR-213ENST00000536843 KRT12Q99456 494 aa17.13■□□□□ 0.33
CHFR-213ENST00000536843 NOP53Q9NZM5 478 aaKnown RBP17.13■□□□□ 0.33
CHFR-213ENST00000536843 ZPR1O75312 459 aa17.12■□□□□ 0.33
CHFR-213ENST00000536843 FGRP09769 529 aa17.12■□□□□ 0.33
CHFR-213ENST00000536843 PECAM1P16284 738 aaPredicted RBP17.12■□□□□ 0.33
CHFR-213ENST00000536843 EIF4A3P38919 411 aaKnown RBP17.12■□□□□ 0.33
CHFR-213ENST00000536843 FUT2Q10981 343 aa17.12■□□□□ 0.33
CHFR-213ENST00000536843 ZNF772Q68DY9 489 aaPredicted RBP17.12■□□□□ 0.33
CHFR-213ENST00000536843 PARD3BQ8TEW8 1205 aa17.12■□□□□ 0.33
CHFR-213ENST00000536843 MTMR8Q96EF0 704 aa17.12■□□□□ 0.33
CHFR-213ENST00000536843 ZNF570Q96NI8 536 aa17.12■□□□□ 0.33
CHFR-213ENST00000536843 JAG2Q9Y219 1238 aa17.12■□□□□ 0.33
CHFR-213ENST00000536843 V9GY48 417 aaPredicted RBP17.12■□□□□ 0.33
CHFR-213ENST00000536843 RGL2O15211 777 aa17.12■□□□□ 0.33
CHFR-213ENST00000536843 ECHS1P30084 290 aa17.12■□□□□ 0.33
CHFR-213ENST00000536843 PEX19P40855 299 aa17.12■□□□□ 0.33
CHFR-213ENST00000536843 ZNF268Q14587 947 aaPredicted RBP17.12■□□□□ 0.33
CHFR-213ENST00000536843 PPP2R5BQ15173 497 aa17.12■□□□□ 0.33
CHFR-213ENST00000536843 AMIGO3Q86WK7 504 aa17.12■□□□□ 0.33
CHFR-213ENST00000536843 CCDC197Q8NCU1 140 aa17.12■□□□□ 0.33
CHFR-213ENST00000536843 TNFRSF25Q93038 417 aa17.12■□□□□ 0.33
CHFR-213ENST00000536843 PCMTD1Q96MG8 357 aaPredicted RBP17.12■□□□□ 0.33
CHFR-213ENST00000536843 PHF20L1A8MW92 1017 aa17.11■□□□□ 0.33
CHFR-213ENST00000536843 PRDX5P30044 214 aa17.11■□□□□ 0.33
CHFR-213ENST00000536843 MAGEA1P43355 309 aa17.11■□□□□ 0.33
CHFR-213ENST00000536843 CUL1Q13616 776 aa17.11■□□□□ 0.33
CHFR-213ENST00000536843 TRADDQ15628 312 aa17.11■□□□□ 0.33
CHFR-213ENST00000536843 MIIPQ5JXC2 388 aa17.11■□□□□ 0.33
CHFR-213ENST00000536843 TXNRD3Q86VQ6 643 aa17.11■□□□□ 0.33
CHFR-213ENST00000536843 C2CD5Q86YS7 1000 aa17.11■□□□□ 0.33
CHFR-213ENST00000536843 CENPTQ96BT3 561 aa17.11■□□□□ 0.33
CHFR-213ENST00000536843 CHMP6Q96FZ7 201 aa17.11■□□□□ 0.33
CHFR-213ENST00000536843 CALR3Q96L12 384 aaKnown RBP17.11■□□□□ 0.33
CHFR-213ENST00000536843 DUSP9Q99956 384 aaKnown RBP17.11■□□□□ 0.33
CHFR-213ENST00000536843 ANKRD2Q9GZV1 360 aa17.11■□□□□ 0.33
CHFR-213ENST00000536843 KCNMB3Q9NPA1 279 aa17.11■□□□□ 0.33
CHFR-213ENST00000536843 MYH10P35580 1976 aa17.11■□□□□ 0.33
CHFR-213ENST00000536843 DUOX1Q9NRD9 1551 aa17.11■□□□□ 0.33
CHFR-213ENST00000536843 PRPF3O43395 683 aaKnown RBP17.11■□□□□ 0.33
CHFR-213ENST00000536843 RAD51CO43502 376 aa17.11■□□□□ 0.33
CHFR-213ENST00000536843 CYP2D6P10635 497 aa17.11■□□□□ 0.33
CHFR-213ENST00000536843 SSR1P43307 286 aaKnown RBP17.11■□□□□ 0.33
CHFR-213ENST00000536843 TNNC1P63316 161 aa17.11■□□□□ 0.33
CHFR-213ENST00000536843 FAM114A1Q8IWE2 563 aa17.11■□□□□ 0.33
CHFR-213ENST00000536843 OR2W6PQ8NHA6 318 aa17.11■□□□□ 0.33
CHFR-213ENST00000536843 CNKSR1Q969H4 720 aa17.11■□□□□ 0.33
CHFR-213ENST00000536843 INPP4AQ96PE3 977 aaPredicted RBP17.11■□□□□ 0.33
CHFR-213ENST00000536843 CNOT10Q9H9A5 744 aaKnown RBP17.11■□□□□ 0.33
CHFR-213ENST00000536843 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.11■□□□□ 0.33
CHFR-213ENST00000536843 BAZ2AQ9UIF9 1905 aaKnown RBP17.11■□□□□ 0.33
CHFR-213ENST00000536843 SCN7AQ01118 1682 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms