RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 ARSHQ5FYA8 562 aa8.74□□□□□ -1.01
CCDC60-203ENST00000536742 MCTP1Q6DN14 999 aa8.74□□□□□ -1.01
CCDC60-203ENST00000536742 OTUD7BQ6GQQ9 843 aa8.74□□□□□ -1.01
CCDC60-203ENST00000536742 NBPF5PQ86XG9 351 aaPredicted RBP8.74□□□□□ -1.01
CCDC60-203ENST00000536742 PHACTR4Q8IZ21 702 aa8.74□□□□□ -1.01
CCDC60-203ENST00000536742 LRFN3Q9BTN0 628 aa8.74□□□□□ -1.01
CCDC60-203ENST00000536742 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.74□□□□□ -1.01
CCDC60-203ENST00000536742 MKNK2Q9HBH9 465 aa8.74□□□□□ -1.01
CCDC60-203ENST00000536742 CEP131Q9UPN4 1083 aa8.74□□□□□ -1.01
CCDC60-203ENST00000536742 MAPK8IP1Q9UQF2 711 aa8.74□□□□□ -1.01
CCDC60-203ENST00000536742 RAB3GAP2Q9H2M9 1393 aa8.73□□□□□ -1.01
CCDC60-203ENST00000536742 DNAJA2O60884 412 aa8.73□□□□□ -1.01
CCDC60-203ENST00000536742 FARP2O94887 1054 aaPredicted RBP8.73□□□□□ -1.01
CCDC60-203ENST00000536742 GJB1P08034 283 aa8.73□□□□□ -1.01
CCDC60-203ENST00000536742 FAM87AP0C7U9 286 aa8.73□□□□□ -1.01
CCDC60-203ENST00000536742 CANXP27824 592 aaKnown RBP8.73□□□□□ -1.01
CCDC60-203ENST00000536742 AOC3Q16853 763 aa8.73□□□□□ -1.01
CCDC60-203ENST00000536742 TBC1D10BQ4KMP7 808 aaPredicted RBP8.73□□□□□ -1.01
CCDC60-203ENST00000536742 CCDC81Q6ZN84 652 aa8.73□□□□□ -1.01
CCDC60-203ENST00000536742 C22orf34Q6ZV56 151 aa8.73□□□□□ -1.01
CCDC60-203ENST00000536742 TOP6BLQ8N6T0 577 aa8.73□□□□□ -1.01
CCDC60-203ENST00000536742 SUPT20HQ8NEM7 779 aa8.73□□□□□ -1.01
CCDC60-203ENST00000536742 SH3TC2Q8TF17 1288 aa8.73□□□□□ -1.01
CCDC60-203ENST00000536742 MIPEPQ99797 713 aa8.73□□□□□ -1.01
CCDC60-203ENST00000536742 TMX4Q9H1E5 349 aaPredicted RBP8.73□□□□□ -1.01
CCDC60-203ENST00000536742 LGR6Q9HBX8 967 aa8.73□□□□□ -1.01
CCDC60-203ENST00000536742 OAS3Q9Y6K5 1087 aaKnown RBP8.73□□□□□ -1.01
CCDC60-203ENST00000536742 MUC6Q6W4X9 2439 aa8.73□□□□□ -1.01
CCDC60-203ENST00000536742 UPK3BL1B0FP48 263 aa8.72□□□□□ -1.01
CCDC60-203ENST00000536742 UPK3BL2E5RIL1 263 aa8.72□□□□□ -1.01
CCDC60-203ENST00000536742 UBE2Q2LH0YL09 131 aa8.72□□□□□ -1.01
CCDC60-203ENST00000536742 RAD17O75943 681 aa8.72□□□□□ -1.01
CCDC60-203ENST00000536742 SLITRK5O94991 958 aa8.72□□□□□ -1.01
CCDC60-203ENST00000536742 FOSL1P15407 271 aa8.72□□□□□ -1.01
CCDC60-203ENST00000536742 HOXA10P31260 410 aaPredicted RBP8.72□□□□□ -1.01
CCDC60-203ENST00000536742 ADMP35318 185 aa8.72□□□□□ -1.01
CCDC60-203ENST00000536742 CASP7P55210 303 aa8.72□□□□□ -1.01
CCDC60-203ENST00000536742 ATXN2LQ8WWM7 1075 aaKnown RBP8.72□□□□□ -1.01
CCDC60-203ENST00000536742 DHRS1Q96LJ7 313 aa8.72□□□□□ -1.01
CCDC60-203ENST00000536742 DRC1Q96MC2 740 aa8.72□□□□□ -1.01
CCDC60-203ENST00000536742 UHRF1Q96T88 793 aaPredicted RBP8.72□□□□□ -1.01
CCDC60-203ENST00000536742 ANGEL1Q9UNK9 670 aaKnown RBP8.72□□□□□ -1.01
CCDC60-203ENST00000536742 KIF7Q2M1P5 1343 aa8.72□□□□□ -1.01
CCDC60-203ENST00000536742 SCN7AQ01118 1682 aa8.72□□□□□ -1.01
CCDC60-203ENST00000536742 PKD1L2Q7Z442 2459 aa8.71□□□□□ -1.01
CCDC60-203ENST00000536742 ST20-MTHFSA0A0A6YYL1 179 aa8.71□□□□□ -1.02
CCDC60-203ENST00000536742 SHTN1A0MZ66 631 aa8.71□□□□□ -1.02
CCDC60-203ENST00000536742 PRAMEF22A3QJZ6 481 aa8.71□□□□□ -1.02
CCDC60-203ENST00000536742 CYP26A1O43174 497 aa8.71□□□□□ -1.02
CCDC60-203ENST00000536742 GBP1P32455 592 aa8.71□□□□□ -1.02
CCDC60-203ENST00000536742 KIR3DL1P43629 444 aa8.71□□□□□ -1.02
CCDC60-203ENST00000536742 MTHFSP49914 203 aa8.71□□□□□ -1.02
CCDC60-203ENST00000536742 CHMP4BP1P59074 171 aa8.71□□□□□ -1.02
CCDC60-203ENST00000536742 RNF4P78317 190 aa8.71□□□□□ -1.02
CCDC60-203ENST00000536742 DNAJB8Q8NHS0 232 aa8.71□□□□□ -1.02
CCDC60-203ENST00000536742 DPH2Q9BQC3 489 aaPredicted RBP8.71□□□□□ -1.02
CCDC60-203ENST00000536742 PRDM5Q9NQX1 630 aaPredicted RBP8.71□□□□□ -1.02
CCDC60-203ENST00000536742 GGA3Q9NZ52 723 aa8.71□□□□□ -1.02
CCDC60-203ENST00000536742 PRKAG3Q9UGI9 489 aa8.71□□□□□ -1.02
CCDC60-203ENST00000536742 BDP1A6H8Y1 2624 aa8.71□□□□□ -1.02
CCDC60-203ENST00000536742 NCOR1O75376 2440 aa8.71□□□□□ -1.02
CCDC60-203ENST00000536742 STK10O94804 968 aaKnown RBP8.7□□□□□ -1.02
CCDC60-203ENST00000536742 EOMESO95936 686 aa8.7□□□□□ -1.02
CCDC60-203ENST00000536742 FOSL2P15408 326 aa8.7□□□□□ -1.02
CCDC60-203ENST00000536742 PRMT2P55345 433 aa8.7□□□□□ -1.02
CCDC60-203ENST00000536742 CRHR2Q13324 411 aa8.7□□□□□ -1.02
CCDC60-203ENST00000536742 BBS9Q3SYG4 887 aa8.7□□□□□ -1.02
CCDC60-203ENST00000536742 TMEM31Q5JXX7 168 aa8.7□□□□□ -1.02
CCDC60-203ENST00000536742 MOB2Q70IA6 237 aa8.7□□□□□ -1.02
CCDC60-203ENST00000536742 ASPNQ9BXN1 380 aa8.7□□□□□ -1.02
CCDC60-203ENST00000536742 SLC12A5Q9H2X9 1139 aa8.7□□□□□ -1.02
CCDC60-203ENST00000536742 ANTXR1Q9H6X2 564 aa8.7□□□□□ -1.02
CCDC60-203ENST00000536742 PAX4O43316 350 aa8.69□□□□□ -1.02
CCDC60-203ENST00000536742 ADAMTS4O75173 837 aa8.69□□□□□ -1.02
CCDC60-203ENST00000536742 STARD3NLO95772 234 aa8.69□□□□□ -1.02
CCDC60-203ENST00000536742 RPS12P25398 132 aaKnown RBP8.69□□□□□ -1.02
CCDC60-203ENST00000536742 MAGEA10P43363 369 aaPredicted RBP8.69□□□□□ -1.02
CCDC60-203ENST00000536742 SFRP5Q5T4F7 317 aa8.69□□□□□ -1.02
CCDC60-203ENST00000536742 ZNF765Q7L2R6 523 aa8.69□□□□□ -1.02
CCDC60-203ENST00000536742 PPP1R13LQ8WUF5 828 aa8.69□□□□□ -1.02
CCDC60-203ENST00000536742 RNF141Q8WVD5 230 aa8.69□□□□□ -1.02
CCDC60-203ENST00000536742 ANAPC16Q96DE5 110 aa8.69□□□□□ -1.02
CCDC60-203ENST00000536742 KIF2CQ99661 725 aa8.69□□□□□ -1.02
CCDC60-203ENST00000536742 TPX2Q9ULW0 747 aaKnown RBP8.69□□□□□ -1.02
CCDC60-203ENST00000536742 LOC105371045A0A1W2PR82 267 aa8.68□□□□□ -1.02
CCDC60-203ENST00000536742 FAM170BA6NMN3 283 aa8.68□□□□□ -1.02
CCDC60-203ENST00000536742 NF2P35240 595 aa8.68□□□□□ -1.02
CCDC60-203ENST00000536742 CAP1Q01518 475 aa8.68□□□□□ -1.02
CCDC60-203ENST00000536742 PLEKHO1Q53GL0 409 aaPredicted RBP8.68□□□□□ -1.02
CCDC60-203ENST00000536742 FAM214BQ7L5A3 538 aa8.68□□□□□ -1.02
CCDC60-203ENST00000536742 SHISA5Q8N114 240 aa8.68□□□□□ -1.02
CCDC60-203ENST00000536742 XAGE3Q8WTP9 111 aa8.68□□□□□ -1.02
CCDC60-203ENST00000536742 MYLIPQ8WY64 445 aa8.68□□□□□ -1.02
CCDC60-203ENST00000536742 UBXN4Q92575 508 aa8.68□□□□□ -1.02
CCDC60-203ENST00000536742 FBXL18Q96ME1 805 aa8.68□□□□□ -1.02
CCDC60-203ENST00000536742 ASB2Q96Q27 587 aa8.68□□□□□ -1.02
CCDC60-203ENST00000536742 SLC9A7Q96T83 725 aa8.68□□□□□ -1.02
CCDC60-203ENST00000536742 PHAXQ9H814 394 aaKnown RBP8.68□□□□□ -1.02
CCDC60-203ENST00000536742 FAM205AQ6ZU69 1335 aa8.68□□□□□ -1.02
CCDC60-203ENST00000536742 LEFTY1O75610 366 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms