RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 HOMER1Q86YM7 354 aa14.35□□□□□ -0.11
PRKDC-207ENST00000536483 DHX37Q8IY37 1157 aaKnown RBP14.35□□□□□ -0.11
PRKDC-207ENST00000536483 EMID1Q96A84 441 aaPredicted RBP14.35□□□□□ -0.11
PRKDC-207ENST00000536483 ZBED2Q9BTP6 218 aa14.35□□□□□ -0.11
PRKDC-207ENST00000536483 RBM28Q9NW13 759 aaKnown RBP14.35□□□□□ -0.11
PRKDC-207ENST00000536483 BRPF3Q9ULD4 1205 aa14.35□□□□□ -0.11
PRKDC-207ENST00000536483 SORBS3O60504 671 aa14.34□□□□□ -0.11
PRKDC-207ENST00000536483 PLEKHA8P1O95397 391 aa14.34□□□□□ -0.11
PRKDC-207ENST00000536483 CXCL10P02778 98 aa14.34□□□□□ -0.11
PRKDC-207ENST00000536483 ZNF286BP0CG31 522 aa14.34□□□□□ -0.11
PRKDC-207ENST00000536483 TGFB3P10600 412 aa14.34□□□□□ -0.11
PRKDC-207ENST00000536483 RBL2Q08999 1139 aa14.34□□□□□ -0.11
PRKDC-207ENST00000536483 MFSD10Q14728 455 aa14.34□□□□□ -0.11
PRKDC-207ENST00000536483 KIAA0753Q2KHM9 967 aa14.34□□□□□ -0.11
PRKDC-207ENST00000536483 CNKSR3Q6P9H4 555 aa14.34□□□□□ -0.11
PRKDC-207ENST00000536483 KCNV1Q6PIU1 500 aa14.34□□□□□ -0.11
PRKDC-207ENST00000536483 SYNE3Q6ZMZ3 975 aa14.34□□□□□ -0.11
PRKDC-207ENST00000536483 PPTC7Q8NI37 304 aa14.34□□□□□ -0.11
PRKDC-207ENST00000536483 KATNAL1Q9BW62 490 aa14.34□□□□□ -0.11
PRKDC-207ENST00000536483 USP26Q9BXU7 913 aa14.34□□□□□ -0.11
PRKDC-207ENST00000536483 LRRC2Q9BYS8 371 aa14.34□□□□□ -0.11
PRKDC-207ENST00000536483 FAM217BQ9NTX9 383 aaPredicted RBP14.34□□□□□ -0.11
PRKDC-207ENST00000536483 COG5Q9UP83 839 aa14.34□□□□□ -0.11
PRKDC-207ENST00000536483 NID2Q14112 1375 aa14.34□□□□□ -0.11
PRKDC-207ENST00000536483 KIAA1217Q5T5P2 1943 aa14.33□□□□□ -0.11
PRKDC-207ENST00000536483 HAS3O00219 553 aa14.33□□□□□ -0.12
PRKDC-207ENST00000536483 MEIS2O14770 477 aa14.33□□□□□ -0.12
PRKDC-207ENST00000536483 LPXNO60711 386 aa14.33□□□□□ -0.12
PRKDC-207ENST00000536483 STAM2O75886 525 aa14.33□□□□□ -0.12
PRKDC-207ENST00000536483 RGS20O76081 388 aa14.33□□□□□ -0.12
PRKDC-207ENST00000536483 PARNO95453 639 aaKnown RBP14.33□□□□□ -0.12
PRKDC-207ENST00000536483 F2P00734 622 aa14.33□□□□□ -0.12
PRKDC-207ENST00000536483 MYCLP12524 364 aaPredicted RBP14.33□□□□□ -0.12
PRKDC-207ENST00000536483 PSMA5P28066 241 aa14.33□□□□□ -0.12
PRKDC-207ENST00000536483 ZNF200P98182 395 aaPredicted RBP14.33□□□□□ -0.12
PRKDC-207ENST00000536483 PTK7Q13308 1070 aa14.33□□□□□ -0.12
PRKDC-207ENST00000536483 PGM5Q15124 567 aa14.33□□□□□ -0.12
PRKDC-207ENST00000536483 XRRA1Q6P2D8 792 aa14.33□□□□□ -0.12
PRKDC-207ENST00000536483 WNT8BQ93098 351 aa14.33□□□□□ -0.12
PRKDC-207ENST00000536483 SEC63Q9UGP8 760 aaKnown RBP14.33□□□□□ -0.12
PRKDC-207ENST00000536483 ABHD14A-ACY1A0A1B0GW23 586 aa14.32□□□□□ -0.12
PRKDC-207ENST00000536483 ZBTB43O43298 467 aa14.32□□□□□ -0.12
PRKDC-207ENST00000536483 GJB5O95377 273 aa14.32□□□□□ -0.12
PRKDC-207ENST00000536483 HOXD8P13378 290 aaPredicted RBP14.32□□□□□ -0.12
PRKDC-207ENST00000536483 HOXA13P31271 388 aaPredicted RBP14.32□□□□□ -0.12
PRKDC-207ENST00000536483 HIC1Q14526 733 aa14.32□□□□□ -0.12
PRKDC-207ENST00000536483 TRIM71Q2Q1W2 868 aaKnown RBP14.32□□□□□ -0.12
PRKDC-207ENST00000536483 HSDL1Q3SXM5 330 aa14.32□□□□□ -0.12
PRKDC-207ENST00000536483 ZNF618Q5T7W0 954 aa14.32□□□□□ -0.12
PRKDC-207ENST00000536483 MYSM1Q5VVJ2 828 aa14.32□□□□□ -0.12
PRKDC-207ENST00000536483 TRAF7Q6Q0C0 670 aa14.32□□□□□ -0.12
PRKDC-207ENST00000536483 HLA-CQ95604 372 aa14.32□□□□□ -0.12
PRKDC-207ENST00000536483 ZFP91Q96JP5 570 aaPredicted RBP14.32□□□□□ -0.12
PRKDC-207ENST00000536483 SPATA33Q96N06 139 aa14.32□□□□□ -0.12
PRKDC-207ENST00000536483 TM6SF1Q9BZW5 370 aa14.32□□□□□ -0.12
PRKDC-207ENST00000536483 MTUS1Q9ULD2 1270 aa14.32□□□□□ -0.12
PRKDC-207ENST00000536483 MYH6P13533 1939 aa14.32□□□□□ -0.12
PRKDC-207ENST00000536483 PTPRSQ13332 1948 aa14.32□□□□□ -0.12
PRKDC-207ENST00000536483 BAZ2BQ9UIF8 2168 aaKnown RBP14.32□□□□□ -0.12
PRKDC-207ENST00000536483 hCG_1984214I3L0E3 225 aa14.31□□□□□ -0.12
PRKDC-207ENST00000536483 PPFIA4O75335 1185 aa14.31□□□□□ -0.12
PRKDC-207ENST00000536483 GGPS1O95749 300 aa14.31□□□□□ -0.12
PRKDC-207ENST00000536483 RXRAP19793 462 aa14.31□□□□□ -0.12
PRKDC-207ENST00000536483 RPS6KB1P23443 525 aa14.31□□□□□ -0.12
PRKDC-207ENST00000536483 ICAM3P32942 547 aa14.31□□□□□ -0.12
PRKDC-207ENST00000536483 SP2Q02086 613 aa14.31□□□□□ -0.12
PRKDC-207ENST00000536483 IKBKEQ14164 716 aa14.31□□□□□ -0.12
PRKDC-207ENST00000536483 MBTPS1Q14703 1052 aa14.31□□□□□ -0.12
PRKDC-207ENST00000536483 CELF3Q5SZQ8 465 aaKnown RBP14.31□□□□□ -0.12
PRKDC-207ENST00000536483 FAM117BQ6P1L5 589 aa14.31□□□□□ -0.12
PRKDC-207ENST00000536483 BLOC1S2Q6QNY1 142 aa14.31□□□□□ -0.12
PRKDC-207ENST00000536483 MICU3Q86XE3 530 aa14.31□□□□□ -0.12
PRKDC-207ENST00000536483 ZNF713Q8N859 430 aaPredicted RBP14.31□□□□□ -0.12
PRKDC-207ENST00000536483 IL31RAQ8NI17 732 aa14.31□□□□□ -0.12
PRKDC-207ENST00000536483 GDPD5Q8WTR4 605 aa14.31□□□□□ -0.12
PRKDC-207ENST00000536483 IL17RAQ96F46 866 aa14.31□□□□□ -0.12
PRKDC-207ENST00000536483 JAKMIP1Q96N16 626 aaKnown RBP14.31□□□□□ -0.12
PRKDC-207ENST00000536483 INPP4AQ96PE3 977 aaPredicted RBP14.31□□□□□ -0.12
PRKDC-207ENST00000536483 RAD9AQ99638 391 aa14.31□□□□□ -0.12
PRKDC-207ENST00000536483 ZSWIM6Q9HCJ5 1215 aa14.31□□□□□ -0.12
PRKDC-207ENST00000536483 CCDC196A0A1B0GTZ2 297 aa14.3□□□□□ -0.12
PRKDC-207ENST00000536483 CCND2P30279 289 aa14.3□□□□□ -0.12
PRKDC-207ENST00000536483 RTN1Q16799 776 aa14.3□□□□□ -0.12
PRKDC-207ENST00000536483 CMTR1Q8N1G2 835 aaKnown RBP14.3□□□□□ -0.12
PRKDC-207ENST00000536483 GPKOWQ92917 476 aaPredicted RBP eCLIP14.3□□□□□ -0.12
PRKDC-207ENST00000536483 TCEANC2Q96MN5 208 aa14.3□□□□□ -0.12
PRKDC-207ENST00000536483 TGS1Q96RS0 853 aaKnown RBP14.3□□□□□ -0.12
PRKDC-207ENST00000536483 PSTPIP2Q9H939 334 aa14.3□□□□□ -0.12
PRKDC-207ENST00000536483 SUGCTQ9HAC7 445 aa14.3□□□□□ -0.12
PRKDC-207ENST00000536483 CNTNAP5Q8WYK1 1306 aa14.3□□□□□ -0.12
PRKDC-207ENST00000536483 MYH7BA7E2Y1 1941 aa14.29□□□□□ -0.12
PRKDC-207ENST00000536483 KLF18A0A0U1RQI7 1052 aa14.29□□□□□ -0.12
PRKDC-207ENST00000536483 LINC01553A4QN01 128 aa14.29□□□□□ -0.12
PRKDC-207ENST00000536483 EFCAB14O75071 495 aa14.29□□□□□ -0.12
PRKDC-207ENST00000536483 LGR5O75473 907 aa14.29□□□□□ -0.12
PRKDC-207ENST00000536483 UBA1P22314 1058 aaKnown RBP14.29□□□□□ -0.12
PRKDC-207ENST00000536483 CDC27P30260 824 aa14.29□□□□□ -0.12
PRKDC-207ENST00000536483 ERVK-21P61565 698 aa14.29□□□□□ -0.12
PRKDC-207ENST00000536483 MRPS9P82933 396 aaKnown RBP14.29□□□□□ -0.12
PRKDC-207ENST00000536483 PCNX4Q63HM2 1172 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms