RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 KCNA2P16389 499 aa16.33■□□□□ 0.2
UBE3B-206ENST00000536398 UTP14CQ5TAP6 766 aaKnown RBP16.33■□□□□ 0.2
UBE3B-206ENST00000536398 SESTD1Q86VW0 696 aa16.33■□□□□ 0.2
UBE3B-206ENST00000536398 ZNF713Q8N859 430 aaPredicted RBP16.33■□□□□ 0.2
UBE3B-206ENST00000536398 C7orf31Q8N865 590 aa16.33■□□□□ 0.2
UBE3B-206ENST00000536398 DHX38Q92620 1227 aaKnown RBP16.33■□□□□ 0.2
UBE3B-206ENST00000536398 GPRASP2Q96D09 838 aa16.33■□□□□ 0.2
UBE3B-206ENST00000536398 SENP7Q9BQF6 1050 aa16.33■□□□□ 0.2
UBE3B-206ENST00000536398 ANO3Q9BYT9 981 aa16.33■□□□□ 0.2
UBE3B-206ENST00000536398 IL23AQ9NPF7 189 aa16.33■□□□□ 0.2
UBE3B-206ENST00000536398 VPS54Q9P1Q0 977 aa16.33■□□□□ 0.2
UBE3B-206ENST00000536398 GTF2IRD1Q9UHL9 959 aa16.33■□□□□ 0.2
UBE3B-206ENST00000536398 TPCN1Q9ULQ1 816 aa16.33■□□□□ 0.2
UBE3B-206ENST00000536398 NOP56O00567 594 aaKnown RBP16.32■□□□□ 0.2
UBE3B-206ENST00000536398 FOSP01100 380 aaPredicted RBP16.32■□□□□ 0.2
UBE3B-206ENST00000536398 ARP10275 920 aa16.32■□□□□ 0.2
UBE3B-206ENST00000536398 AKAP17AQ02040 695 aaKnown RBP16.32■□□□□ 0.2
UBE3B-206ENST00000536398 MTMR1Q13613 665 aa16.32■□□□□ 0.2
UBE3B-206ENST00000536398 FAM109BQ6ICB4 259 aaPredicted RBP16.32■□□□□ 0.2
UBE3B-206ENST00000536398 TRIM50Q86XT4 487 aa16.32■□□□□ 0.2
UBE3B-206ENST00000536398 RASGRP4Q8TDF6 673 aa16.32■□□□□ 0.2
UBE3B-206ENST00000536398 UIMC1Q96RL1 719 aa16.32■□□□□ 0.2
UBE3B-206ENST00000536398 MXRA8Q9BRK3 442 aa16.32■□□□□ 0.2
UBE3B-206ENST00000536398 KATNAL1Q9BW62 490 aa16.32■□□□□ 0.2
UBE3B-206ENST00000536398 RNF26Q9BY78 433 aaPredicted RBP16.32■□□□□ 0.2
UBE3B-206ENST00000536398 ZMYND12Q9H0C1 365 aa16.32■□□□□ 0.2
UBE3B-206ENST00000536398 NOD1Q9Y239 953 aa16.32■□□□□ 0.2
UBE3B-206ENST00000536398 DOCK5Q9H7D0 1870 aa16.31■□□□□ 0.2
UBE3B-206ENST00000536398 ANAPC15P60006 121 aa16.31■□□□□ 0.2
UBE3B-206ENST00000536398 SCRN1Q12765 414 aa16.31■□□□□ 0.2
UBE3B-206ENST00000536398 DEFB123Q8N688 67 aa16.31■□□□□ 0.2
UBE3B-206ENST00000536398 WNT8BQ93098 351 aa16.31■□□□□ 0.2
UBE3B-206ENST00000536398 AIFM3Q96NN9 605 aa16.31■□□□□ 0.2
UBE3B-206ENST00000536398 EHMT1Q9H9B1 1298 aa16.31■□□□□ 0.2
UBE3B-206ENST00000536398 C6orf50Q9HD87 102 aa16.31■□□□□ 0.2
UBE3B-206ENST00000536398 KCNH7Q9NS40 1196 aa16.31■□□□□ 0.2
UBE3B-206ENST00000536398 CXXC1Q9P0U4 656 aaPredicted RBP16.31■□□□□ 0.2
UBE3B-206ENST00000536398 GSTTP1A0A1W2PQM5 241 aa16.3■□□□□ 0.2
UBE3B-206ENST00000536398 ESYT2A0FGR8 921 aa16.3■□□□□ 0.2
UBE3B-206ENST00000536398 GRXCR1A8MXD5 290 aa16.3■□□□□ 0.2
UBE3B-206ENST00000536398 H3BRB1 525 aa16.3■□□□□ 0.2
UBE3B-206ENST00000536398 SREBF1P36956 1147 aa16.3■□□□□ 0.2
UBE3B-206ENST00000536398 AK2P54819 239 aa16.3■□□□□ 0.2
UBE3B-206ENST00000536398 ARHGAP4P98171 946 aa16.3■□□□□ 0.2
UBE3B-206ENST00000536398 SSRP1Q08945 709 aaKnown RBP16.3■□□□□ 0.2
UBE3B-206ENST00000536398 AP3B2Q13367 1082 aa16.3■□□□□ 0.2
UBE3B-206ENST00000536398 RASIP1Q5U651 963 aa16.3■□□□□ 0.2
UBE3B-206ENST00000536398 OTOP2Q7RTS6 562 aa16.3■□□□□ 0.2
UBE3B-206ENST00000536398 DEFB128Q7Z7B8 93 aa16.3■□□□□ 0.2
UBE3B-206ENST00000536398 IL17RAQ96F46 866 aa16.3■□□□□ 0.2
UBE3B-206ENST00000536398 CDHR1Q96JP9 859 aa16.3■□□□□ 0.2
UBE3B-206ENST00000536398 GLT8D2Q9H1C3 349 aa16.3■□□□□ 0.2
UBE3B-206ENST00000536398 TUT1Q9H6E5 874 aaKnown RBP16.3■□□□□ 0.2
UBE3B-206ENST00000536398 MEIS1O00470 390 aa16.29■□□□□ 0.2
UBE3B-206ENST00000536398 CPLX1O14810 134 aa16.29■□□□□ 0.2
UBE3B-206ENST00000536398 EDIL3O43854 480 aa16.29■□□□□ 0.2
UBE3B-206ENST00000536398 FGBP02675 491 aa16.29■□□□□ 0.2
UBE3B-206ENST00000536398 IQCF3P0C7M6 154 aa16.29■□□□□ 0.2
UBE3B-206ENST00000536398 SMIM10L2AP0DMW4 78 aa16.29■□□□□ 0.2
UBE3B-206ENST00000536398 SMIM10L2BP0DMW5 78 aa16.29■□□□□ 0.2
UBE3B-206ENST00000536398 ITGB3BPQ13352 177 aaPredicted RBP16.29■□□□□ 0.2
UBE3B-206ENST00000536398 CEP55Q53EZ4 464 aa16.29■□□□□ 0.2
UBE3B-206ENST00000536398 GPR153Q6NV75 609 aa16.29■□□□□ 0.2
UBE3B-206ENST00000536398 RETREG2Q8NC44 543 aa16.29■□□□□ 0.2
UBE3B-206ENST00000536398 GIMAP8Q8ND71 665 aaPredicted RBP16.29■□□□□ 0.2
UBE3B-206ENST00000536398 CCDC12Q8WUD4 166 aaPredicted RBP16.29■□□□□ 0.2
UBE3B-206ENST00000536398 CRYGNQ8WXF5 182 aa16.29■□□□□ 0.2
UBE3B-206ENST00000536398 HERVK_113Q902F9 699 aa16.29■□□□□ 0.2
UBE3B-206ENST00000536398 FAM161BQ96MY7 647 aa16.29■□□□□ 0.2
UBE3B-206ENST00000536398 AGO4Q9HCK5 861 aaKnown RBP16.29■□□□□ 0.2
UBE3B-206ENST00000536398 FAM86B1E9PN63 330 aa16.28■□□□□ 0.2
UBE3B-206ENST00000536398 PITPNM1O00562 1244 aa16.28■□□□□ 0.2
UBE3B-206ENST00000536398 PFKFB2O60825 505 aa16.28■□□□□ 0.2
UBE3B-206ENST00000536398 LARGE1O95461 756 aa16.28■□□□□ 0.2
UBE3B-206ENST00000536398 FAM86B2P0C5J1 330 aa16.28■□□□□ 0.2
UBE3B-206ENST00000536398 TCF7P36402 384 aaPredicted RBP16.28■□□□□ 0.2
UBE3B-206ENST00000536398 ZNF76P36508 570 aa16.28■□□□□ 0.2
UBE3B-206ENST00000536398 BFSP2Q13515 415 aa16.28■□□□□ 0.2
UBE3B-206ENST00000536398 GPNMBQ14956 572 aa16.28■□□□□ 0.2
UBE3B-206ENST00000536398 TRIM71Q2Q1W2 868 aaKnown RBP16.28■□□□□ 0.2
UBE3B-206ENST00000536398 C8orf34Q49A92 452 aa16.28■□□□□ 0.2
UBE3B-206ENST00000536398 PSRC1Q6PGN9 363 aaPredicted RBP16.28■□□□□ 0.2
UBE3B-206ENST00000536398 TEX2Q8IWB9 1127 aa16.28■□□□□ 0.2
UBE3B-206ENST00000536398 TRIM22Q8IYM9 498 aa16.28■□□□□ 0.2
UBE3B-206ENST00000536398 REXO1Q8N1G1 1221 aaKnown RBP16.28■□□□□ 0.2
UBE3B-206ENST00000536398 NECAB1Q8N987 351 aa16.28■□□□□ 0.2
UBE3B-206ENST00000536398 SLKQ9H2G2 1235 aaPredicted RBP16.28■□□□□ 0.2
UBE3B-206ENST00000536398 RNPEPQ9H4A4 650 aa16.28■□□□□ 0.2
UBE3B-206ENST00000536398 IGLV3-22A0A075B6J6 115 aa16.27■□□□□ 0.2
UBE3B-206ENST00000536398 MAFGO15525 162 aa16.27■□□□□ 0.2
UBE3B-206ENST00000536398 TREHO43280 583 aa16.27■□□□□ 0.2
UBE3B-206ENST00000536398 CTDNEP1O95476 244 aa16.27■□□□□ 0.2
UBE3B-206ENST00000536398 CYP3A4P08684 503 aa16.27■□□□□ 0.2
UBE3B-206ENST00000536398 CKBP12277 381 aa16.27■□□□□ 0.2
UBE3B-206ENST00000536398 GNA11P29992 359 aa16.27■□□□□ 0.2
UBE3B-206ENST00000536398 NLRP5P59047 1200 aa16.27■□□□□ 0.2
UBE3B-206ENST00000536398 SMAD3P84022 425 aaKnown RBP16.27■□□□□ 0.2
UBE3B-206ENST00000536398 PTK7Q13308 1070 aa16.27■□□□□ 0.2
UBE3B-206ENST00000536398 RPUSD2Q8IZ73 545 aaKnown RBP16.27■□□□□ 0.2
UBE3B-206ENST00000536398 SEPT1Q8WYJ6 367 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms